prot_H-paniculata_contig78464.15872.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig78464.15872.1
Unique Name	prot_H-paniculata_contig78464.15872.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	101

Homology

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A1I9LVJ7_9PHAE (30S ribosomal protein S14, chloroplastic n=5 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVJ7_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 6.270e-59
Identity = 93/100 (93.00%), Postives = 97/100 (97.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAKQSMIEREKKREKLVLKY QKRE LLLEFKKANTFSDQM LHKKIEKLPRNSSRIRLRNRCWRTGRSRG+Y+DFGLCRHMIR+MAHNG+LPGVRKASW
Sbjct:    1 MAKQSMIEREKKREKLVLKYSQKRETLLLEFKKANTFSDQMGLHKKIEKLPRNSSRIRLRNRCWRTGRSRGVYKDFGLCRHMIREMAHNGILPGVRKASW 100

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A0R6M4Q0_UNDPI (30S ribosomal protein S14, chloroplastic n=31 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4Q0_UNDPI)

HSP 1 Score: 179 bits (454), Expect = 8.560e-57
Identity = 87/100 (87.00%), Postives = 98/100 (98.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAKQSMIEREKKRE+LV+KYR+KR++LLLEFKKANTFSDQM++HKKIEKLPRNSSRIRLRNRCWRTGRSRG+YRDFGLCRHM+R+M HN +LPGVRKASW
Sbjct:    1 MAKQSMIEREKKRERLVIKYREKRKSLLLEFKKANTFSDQMEVHKKIEKLPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMVREMGHNCLLPGVRKASW 100

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A8F0FAM9_9PHAE (Ribosomal protein S14 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAM9_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 5.570e-53
Identity = 83/100 (83.00%), Postives = 95/100 (95.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAKQSMI+REKKREKLV KY +KR+ALL++FKKAN F DQM++HKKIEKLPRNS++IRLRNRCWRTGRSRG+YRDFGLCRHMIR+MAHN +LPGVRKASW
Sbjct:    1 MAKQSMIQREKKREKLVEKYSEKRKALLIDFKKANNFVDQMEIHKKIEKLPRNSAKIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCILPGVRKASW 100

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A2R4QPV6_9PHAE (30S ribosomal protein S14 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPV6_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 1.310e-51
Identity = 83/100 (83.00%), Postives = 92/100 (92.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAKQSMI+REKKREKLVLKYR+KR+ LL EFK A+ F  QM++ KKIEKLPRNSSRIRLRNRCWRTGRSRG+YRDFGLCRHMIR+MAHN +LPGVRKASW
Sbjct:    1 MAKQSMIQREKKREKLVLKYREKRDFLLFEFKTADNFLQQMEIRKKIEKLPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVRKASW 100

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A8F0F7A7_9PHAE (Ribosomal protein S14 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A7_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 8.880e-50
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAKQSMIEREKKR K V KY ++R  LLLEFKKA+TFS QM++HKKIE+LPRNSS IRLRNRCWRTGRSRGIYRDFGLCRHMIR+MAH+ +LPGVRKASW
Sbjct:    1 MAKQSMIEREKKRTKSVKKYSERRRLLLLEFKKADTFSKQMEIHKKIEQLPRNSSMIRLRNRCWRTGRSRGIYRDFGLCRHMIREMAHDCILPGVRKASW 100

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A2I4Q2G1_9PHAE (30S ribosomal protein S14, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2G1_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 2.970e-48
Identity = 77/100 (77.00%), Postives = 90/100 (90.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAKQSMIEREKKR KLV +Y +KR+ LL EFK++ TF D+  +H+KIEKLPRNSS IR+RNRCW+TGRSRG+YRDFGLCRHM+R+MAHNGMLPGVRKASW
Sbjct:    1 MAKQSMIEREKKRVKLVNRYNEKRKLLLSEFKESKTFLDKQVIHQKIEKLPRNSSNIRIRNRCWQTGRSRGVYRDFGLCRHMLREMAHNGMLPGVRKASW 100

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A1L2F1U9_9PHAE (Ribosomal protein S14 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1U9_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.210e-47
Identity = 74/100 (74.00%), Postives = 93/100 (93.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAK+SMI+RE+KREKLV +Y +KR+ LLLEFKK N F +QMQ++++I+KLPRNSS+IRL+NRCWRTGR+RG+YRDFGLCRHMIR+MAHN +LPGV+KASW
Sbjct:    1 MAKKSMIQRERKREKLVFRYIEKRQLLLLEFKKTNNFVEQMQINRRIQKLPRNSSKIRLKNRCWRTGRTRGVYRDFGLCRHMIREMAHNCILPGVKKASW 100

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A7S6U9W6_9STRA (30S ribosomal protein S14, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9W6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.440e-47
Identity = 76/100 (76.00%), Postives = 87/100 (87.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAKQS+IEREKKR+ LV+KY++KR+  L  F K N F  +M LHKKIEKLPRNSSRIRLRNRCWRTGRSRG YRDFGLCRHMIR+M HNG+LPG+RK+SW
Sbjct:    1 MAKQSLIEREKKRQHLVIKYKKKRKTFLALFNKENNFETKMLLHKKIEKLPRNSSRIRLRNRCWRTGRSRGTYRDFGLCRHMIREMGHNGLLPGLRKSSW 100

[Close]

BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A8E5XRG5_9PHAE (30S ribosomal protein S14, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRG5_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.410e-46
Identity = 74/100 (74.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAK++MIERE KR +LV KY +KR +LL EFK+ANTFS QM+ H+KIE+LP+NSS+IRLRNRCWRTGRSRG+YRDFGLCRHMIR+M H G LPG+RK+SW
Sbjct:    1 MAKKAMIERENKRIRLVSKYHEKRRSLLDEFKRANTFSIQMETHRKIERLPKNSSKIRLRNRCWRTGRSRGVYRDFGLCRHMIREMGHTGTLPGIRKSSW 100

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BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Match: A0A8E5BHX8_9PHAE (Ribosomal protein S14 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BHX8_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 9.550e-45
Identity = 69/100 (69.00%), Postives = 92/100 (92.00%), Query Frame = 0

Query:    1 MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKLPRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW 100
            MAKQS++EREKKR+K+++KY  +R+ LL++ KKANTF +Q+Q+HK IEKLPRN++++R+RNRCW TGRSRG+YRDFGLCRHMIR+MAHN +LPG++KASW
Sbjct:    1 MAKQSILEREKKRKKIIIKYSVRRKNLLIKLKKANTFLEQVQIHKIIEKLPRNTAQVRVRNRCWITGRSRGVYRDFGLCRHMIRNMAHNCILPGIKKASW 100

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig78464.15872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1I9LVJ7_9PHAE	6.270e-59	93.00	30S ribosomal protein S14, chloroplastic n=5 Tax=E...	[more]
A0A0R6M4Q0_UNDPI	8.560e-57	87.00	30S ribosomal protein S14, chloroplastic n=31 Tax=...	[more]
A0A8F0FAM9_9PHAE	5.570e-53	83.00	Ribosomal protein S14 n=1 Tax=Desmarestia aculeata...	[more]
A0A2R4QPV6_9PHAE	1.310e-51	83.00	30S ribosomal protein S14 n=3 Tax=Fucaceae TaxID=3...	[more]
A0A8F0F7A7_9PHAE	8.880e-50	82.00	Ribosomal protein S14 n=1 Tax=Protohalopteris sp. ...	[more]
A0A2I4Q2G1_9PHAE	2.970e-48	77.00	30S ribosomal protein S14, chloroplastic n=1 Tax=D...	[more]
A0A1L2F1U9_9PHAE	1.210e-47	74.00	Ribosomal protein S14 n=1 Tax=Coccophora langsdorf...	[more]
A0A7S6U9W6_9STRA	2.440e-47	76.00	30S ribosomal protein S14, chloroplastic n=1 Tax=S...	[more]
A0A8E5XRG5_9PHAE	1.410e-46	74.00	30S ribosomal protein S14, chloroplastic n=1 Tax=I...	[more]
A0A8E5BHX8_9PHAE	9.550e-45	69.00	Ribosomal protein S14 n=1 Tax=Phaeophyceae sp. Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	4.10.830.10		coord: 40..100 e-value: 9.5E-25 score: 88.1
None	No IPR available	PANTHER	PTHR19836:SF25	30S RIBOSOMAL PROTEIN S14, CHLOROPLASTIC	coord: 1..100
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..100
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 46..99 e-value: 9.8E-25 score: 86.1
IPR001209	Ribosomal protein S14	PANTHER	PTHR19836	30S RIBOSOMAL PROTEIN S14	coord: 1..100
IPR018271	Ribosomal protein S14, conserved site	PROSITE	PS00527	RIBOSOMAL_S14	coord: 62..84
IPR023036	Ribosomal protein S14, bacterial/plastid	HAMAP	MF_00537	Ribosomal_S14_1	coord: 1..100 score: 25.509

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig78464	contig	H-paniculata_contig78464:114..416 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig78464.15872.1	mRNA_H-paniculata_contig78464.15872.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig78464 114..416 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig78464.15872.1 ID=prot_H-paniculata_contig78464.15872.1|Name=mRNA_H-paniculata_contig78464.15872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
MAKQSMIEREKKREKLVLKYRQKREALLLEFKKANTFSDQMQLHKKIEKL
PRNSSRIRLRNRCWRTGRSRGIYRDFGLCRHMIRDMAHNGMLPGVRKASW
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001209	Ribosomal_S14
IPR018271	Ribosomal_S14_CS
IPR023036	Ribosomal_S14_bac/plastid