prot_H-paniculata_contig7757.15791.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7757.15791.1
Unique Nameprot_H-paniculata_contig7757.15791.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length190
Homology
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BLAST of mRNA_H-paniculata_contig7757.15791.1 vs. uniprot
Match: D8LN81_ECTSI (TBC1 domain family member 23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN81_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 5.460e-22
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0 
Query:   37 GRGFGAAKILAEKLHARGFPYVSILEGGMEGVINYLKTEGIPLEPTVINHDPDMYKAWRE 96
            G GFGAAK  A +LHARGFPYVSILEGGMEG++ +LK EGIPLEPTVI+HDP+ Y+ WRE
Sbjct:  487 GEGFGAAKAFARRLHARGFPYVSILEGGMEGIVQHLKKEGIPLEPTVIDHDPEAYQRWRE 546
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7757.15791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN81_ECTSI5.460e-2275.00TBC1 domain family member 23 n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7757contigH-paniculata_contig7757:5547..10574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7757.15791.1mRNA_H-paniculata_contig7757.15791.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7757 5545..10574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7757.15791.1 ID=prot_H-paniculata_contig7757.15791.1|Name=mRNA_H-paniculata_contig7757.15791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
EDWVTLSDQWEGTDARGRAGNTPPRGEGRAGSSTREGRGFGAAKILAEKL
HARGFPYVSILEGGMEGVINYLKTEGIPLEPTVINHDPDMYKAWREGACA
LHSFGGKVGAGGTPLVNRRVAGERFDCRGYTLVDAGDDESRITMRTDNSH
TNNKTWRGAEAAAAGGQGGLRLGVMAKLARIREGVNRGVG
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