prot_H-paniculata_contig773.15754.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig773.15754.1
Unique Nameprot_H-paniculata_contig773.15754.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length402
Homology
BLAST of mRNA_H-paniculata_contig773.15754.1 vs. uniprot
Match: A0A6H5JVW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW6_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 4.900e-81
Identity = 202/449 (44.99%), Postives = 237/449 (52.78%), Query Frame = 0
Query:    1 MSFFIGDLVVSVCGCSLDEVGGSLVDPCVELSVGNKLHSTSLPV----GTSSDA-GASNGDGGKPVEFHGVSERDALTVTVLDRADPSNEDQDE--------AFVDTLLCTEWGFGGRPVRRSCVIVAASAQEQPSWKCNGSVIGRTGGES---GSRVSTEAKGFVGRDGRKLSAVQLSIRWSPKVRLRTPLSLVADAGKRTRELLSGKIDRPILAALNLILDLIGHASSLH----PGWKRAAIAASVASVSLGSACLAAIAALFLPCTLAXXXXXXXXXXXXXXXA----WVLACTAPVCDHLWRPLLVWAGTRSAVARGLLLLP----AVSV----EGGSEGVEQGGGEVGGRGLVTGERF----------------------GGGGGSGEGTVEQGGWTESVRDKCNYCDNPGRSAAAG-VILLLTCYQNLIEILHSGLEASRWRP 394
            M+FF+GDLVVSV GC +DE  G L++PCVELSVGNKLHST LPV    GT  +  GAS       V FHGV+ERD L VTVLDR+ P +    +        A    L CT WG GGRP RR+CV+  A  +E       GS + R GG+    G   S      + R G   S VQL+I WSP +RL+ PLSLVA AG+ T  ++S KIDRP  A LNL L     AS       P  K AA+ A   S+SLGSA + A AA FLP  LA               A    WV ACT P C+ LWRPLLVW GTR  + R LLLLP    A S+    +GG  GV   G E    G  T  R+                      GG     EG+ E+GG    VR       N G +A AG V+LLL CYQNLI +LHSGLEASRWRP
Sbjct:    1 MTFFVGDLVVSVSGCCIDENAGPLLNPCVELSVGNKLHSTRLPVESRGGTVGEGEGASRKRRSSAVAFHGVTERDVLMVTVLDRSSPPSSAAPDGRTRPLYVAEAKPLRCTHWGSGGRPTRRTCVV--APPEEAQELASGGSAVDRDGGDPRGRGGATSGVGSEVLRRGGE--STVQLAICWSPAIRLKRPLSLVARAGRLTARVVSRKIDRPAAAVLNLGLGGAEKASDFFLFGDPRLKAAALVAFAVSMSLGSAVVVAAAACFLPVMLALSAAAAATFATLGPPALALTWVFACTGPACEQLWRPLLVWTGTRWGLFRRLLLLPLEIEAESLGEGGDGGDRGVLLKGLETSAMGEETARRWLPPPSAADGRQAEEKPNAIIPVGG-----EGSQERGG---GVR-------NGGNAADAGAVVLLLACYQNLIGVLHSGLEASRWRP 430          
BLAST of mRNA_H-paniculata_contig773.15754.1 vs. uniprot
Match: D7FN99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN99_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 5.720e-43
Identity = 120/280 (42.86%), Postives = 141/280 (50.36%), Query Frame = 0
Query:   22 GSLVDPCVELSVGNKLHSTSLPVGT-----SSDAGASNGDGGKPVEFHGVSERDALTVTVLDRADPSNEDQDEAFVDTLLCTEWGFGGRPVRRSCVIVAASAQEQPSWKCNGSVIGRTGGESGSRVSTEAKGF---VGRDGRKLSAVQLSIRWSPKVRLRTPLSLVADAGKRTRELLSGKIDRPILAALNLILDLIGHASSL----HPGWKRAAIAASVASVSLGSACLAAIAALFLPCTLAXXXXXXXXXXXXXXXA----WVLACTAPVCDHLWRPLL 285
            G L++PCVELSVGNKLHST LPV +         GAS       V FHGV+ER                    A    L CT WG GGRP RR+CV+  A  +E        S +GR G +   R    + G+   V R G   S VQL+I WSP +RL+ PLSLVA AG+ T  ++S KIDRP  A LNL L     AS       P  K AA+ AS  S+SLGSA + A AA FLP  LA               A    WV ACT P C+ LWRPLL
Sbjct:   19 GPLLNPCVELSVGNKLHSTRLPVESRGVTVGEGEGASRKRRSSAVAFHGVTERPPYV----------------AEAKPLRCTHWGSGGRPTRRTCVV--APLEEVQELASGASAVGRNGVDPRGRGGANSGGWSEVVRRGGE--STVQLAICWSPAIRLKRPLSLVARAGRLTAHVVSRKIDRPAAAVLNLGLGGAEKASDFLFFGDPRLKAAALVASAVSLSLGSAVVVAAAACFLPVMLALSAAAAATFATLAPPALALTWVFACTGPACEQLWRPLL 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig773.15754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVW6_9PHAE4.900e-8144.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN99_ECTSI5.720e-4342.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..277
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 278..401
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 247..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig773contigH-paniculata_contig773:2520..7845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig773.15754.1mRNA_H-paniculata_contig773.15754.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig773 2520..8045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig773.15754.1 ID=prot_H-paniculata_contig773.15754.1|Name=mRNA_H-paniculata_contig773.15754.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=402bp
MSFFIGDLVVSVCGCSLDEVGGSLVDPCVELSVGNKLHSTSLPVGTSSDA
GASNGDGGKPVEFHGVSERDALTVTVLDRADPSNEDQDEAFVDTLLCTEW
GFGGRPVRRSCVIVAASAQEQPSWKCNGSVIGRTGGESGSRVSTEAKGFV
GRDGRKLSAVQLSIRWSPKVRLRTPLSLVADAGKRTRELLSGKIDRPILA
ALNLILDLIGHASSLHPGWKRAAIAASVASVSLGSACLAAIAALFLPCTL
ALAAAAATLAPPATAIAWVLACTAPVCDHLWRPLLVWAGTRSAVARGLLL
LPAVSVEGGSEGVEQGGGEVGGRGLVTGERFGGGGGSGEGTVEQGGWTES
VRDKCNYCDNPGRSAAAGVILLLTCYQNLIEILHSGLEASRWRPRPRPRP
R*
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