mRNA_H-paniculata_contig768.15686.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI) HSP 1 Score: 473 bits (1218), Expect = 3.020e-143 Identity = 359/729 (49.25%), Postives = 405/729 (55.56%), Query Frame = 1
Query: 16 FFADVAALLERLDSADALRRACVAAVGAALPSLDNVRELLEIVEARLRSFENAGPRVRSMMLERLAAVLTRLHTFELIEGGRGSSSXXXXXXXXXXXXXXXGGVDGSSLSSFSTPAHDDEGRSEEQASRKGLSGSMAVVEVDGMMIDMDDMLAELDREGSKGGSNSDGGGSTVGEGHDDKLHKDGEEXXXXXXXXXEDGDKGIITSSVTTAEETEVARWLGFRTIDLVAYVGAALQAGDVHAASIAWRRHARVDKGPGQPSESLTDSDDGYGDGSGSVGSEGRRLAAFLPEQLANVPVAGAPRLLGEWLRDEVLPALDVTGAMAVRDWAGQYSREVEAVEKRPHDALLFARAVADGSSRVLGSAAELLSVHSAELAGAEASAAAGRAGDGLDAMHWKAWRRDGLDALGRTLGDLVYAWDYHGIRLPLSKFESLPRDLILFRVLDRVQSLECLPREMSHHVLPMAKRYGLDPDAVLLDYMLICT-------RVHG----------------GGLAVKGAGGLLTEQRAVAVARCISSGDGGRSEIRSRAVLALANAASFPFSDGLRELVQDALSWGGPLAGELQEAARALRLSQVVQRYDVTGFSLGDAPRATRLLRHVLAQVHCRSALDDALQVANAYSHLHERSVYVEFLENLASSYPG-----PDANMHGAAEE------GITEEDTGVEASVAG-GVGSRKLMADLATHRQRVAAVLRRLPQSDAR 2097
FF D ALL+RLDS L RAC AAV A LPSL +VR+LLE+VE RLRSF+ AG RVR+MMLERL AVL+RL TFELIEGGR S+ XXXXXXXXXXXXX G DG G DG XXXXXXXXX I+ A + +L R G H + AR + G GRR+ LP QLA+VP P LLG WLRDEVLP LD +AVR WA ++REVE++EKRPH ALLFARAVA GS RVLGSAA LL++HSAELA AEA AAA R G + HWK W+ DGLDALG+TL DL +AWD H +RLPLS FE LPRD++LFRVLDRVQS + LP E++HHVLP+AKRYGLDPD+VLLDYM IC R H G GA GL TEQRAVAVARC+S G+G RSE+RSRAVLALANAASFPFS+GLR+LVQ+ALSWGG L EL+ AA L LSQ+VQR HVLAQV C +ALDD LQVA+AYSHL E +VYVEFLENLA SY G PD GI E +G G G L ADLA HR RVA VL RLP DAR
Sbjct: 641 FFEDARALLDRLDSPGVLGRACEAAVRAVLPSLADVRKLLEVVENRLRSFDTAGARVRNMMLERLTAVLSRLRTFELIEGGRKSTLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGCGRDGAG-------------DGXXXXXXXXXXX--XXXXIVGGRALAAVPHRRSGFLRGRRAS-----------GRGHPGRCRYLAAARPHRSLGPVERRXXXXXXXXXXX---XXXXGRRMGVALPGQLASVPAGAPPLLLGGWLRDEVLPWLDAVEVVAVRSWAVDHAREVESLEKRPHGALLFARAVAQGSGRVLGSAAGLLAIHSAELAAAEAEAAARRTGP---SDHWKRWKPDGLDALGKTLDDLTHAWDVHRLRLPLSTFERLPRDVVLFRVLDRVQSPDWLPEEINHHVLPLAKRYGLDPDSVLLDYMRICAETMVTRRRAHNNTSSGXXXXXXXXTAPGPGGANGASGLTTEQRAVAVARCMSPGEGCRSELRSRAVLALANAASFPFSEGLRDLVQEALSWGGALDAELRRAATTLSLSQIVQR-------------------HVLAQVQCPTALDDGLQVAHAYSHLSETNVYVEFLENLAGSYAGRGSADPDXXXXXXXXXXXXXXXGIISEISGKAGPGRGRSCGGGSLAADLAAHRVRVAGVLHRLPAGDAR 1304
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: A0A6H5KQ38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ38_9PHAE) HSP 1 Score: 267 bits (682), Expect = 5.900e-74 Identity = 198/428 (46.26%), Postives = 238/428 (55.61%), Query Frame = 1
Query: 16 FFADVAALLERLDSADALRRACVAAVGAALPSLDNVRELLEIVEARLRSFENAGPRVRSMMLERLAAVLTRLHTFELIEGGRGSSSXXXXXXXXXXXXXXXGGVDGSS--------LSSFSTPAHDDE------GRSEEQASRKGLSGSMAVVEVDGMMI--DMDDMLAELDREGSKGGSNSDGGGSTVGEGHDDKLHKDGEEXXXXXXXXXEDGDKGIITSSVTTAEETEVARWLGFRTIDLVAYVGAALQAGDVHAASIAWRRHARVDKGPGQPSESLTDSDDGYGDGSGSVGSEGRRLAAFLPEQLANVPVAGAPRLLGEWLRDEVLPALDVTGAMAVRDWAGQYSREVEAVEKRPHDALLFARAVADGSSRVLGSAAELLSVHSAELAGAEASAAAGRAGDGLDAMHWKAWRRDGLDALGRTLG 1251
FF D ALL+RLDS L RAC AAV A LPSL +VR+LLE+VE RLRSF+ AG RVR+ MLERL VL+RL TFELIEGGR S+ XXXXXXXXX +S + + P DD+ G E +R G + D D D G S G + E+ + G G AE +EV RWL F DLV+++G ALQAGD+ AA++AWRRH R D+G G+ + GRR+ LP QLA+VP P LLG WLRDEVLP LD +AVR WA ++R+VE++EKRPH ALLFARA+A GS RVLGSAA LL+VHSAELA AEA AAA R G + HWK W+ DGLDALG+TLG
Sbjct: 512 FFDDARALLDRLDSPGVLGRACEAAVRAVLPSLADVRKLLEVVENRLRSFDTAGARVRNTMLERLTGVLSRLRTFELIEGGRKSTLQASATAXXXXXXXXXXXXXXTSELAAVGLPSGTLTRPPGDDDSSDAELGDGESAVARGGGKEHQGCGRDGARDVGDDSDXXXXXEDAHPGGAGRRSSSPGPVL------SSRAGSEDGGGNPHTHDQHGGSG-------DAELSEVERWLQFLAADLVSFMGGALQAGDIQAAAVAWRRHGRTDRGAGRAAXXXXXXXXXXXX----XXXGGRRMGVALPGQLASVPAGAPPLLLGGWLRDEVLPWLDAVEVVAVRSWAVDHARDVESLEKRPHGALLFARAIAQGSGRVLGSAAALLAVHSAELAAAEAEAAARRTGP---SDHWKRWKPDGLDALGKTLG 919
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: A0A6H5KRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF9_9PHAE) HSP 1 Score: 206 bits (524), Expect = 7.140e-57 Identity = 128/216 (59.26%), Postives = 144/216 (66.67%), Query Frame = 1
Query: 1495 GAGGLLTEQRAVAVARCISSGDGGRSEIRSRAVLALANAASFPFSDGLRELVQDALSWGGPLAGELQEAARALRLSQVVQRYDVTGFSLGDAPRATRLLRHVLAQVHCRSALDDALQVANAYSHLHERSVYVEFLENLASSYPG-----PDA--NMHGAAEEGITEEDTGVEASVAGGVGSRK--------LMADLATHRQRVAAVLRRLPQSDAR 2097
GA GL TEQRAVAVARC+S G+G RSE+RSRAVLALANAASFPFS+GLRELVQ+ALSWGG L EL+ AA L LSQ+VQRY V GF+L DAPRATRLLRHVLAQV A+AYSHL E +VYVEFLENLA SYPG PDA +G+ + ++G G + L DLA HR RVA VL RLP DAR
Sbjct: 32 GASGLTTEQRAVAVARCMSPGEGCRSELRSRAVLALANAASFPFSEGLRELVQEALSWGGALDAELRRAATTLSLSQIVQRYHVKGFNLVDAPRATRLLRHVLAQV------------AHAYSHLSETNVYVEFLENLAGSYPGRGSADPDAAXXXXXXXXXXXXXXXSGIISEISGKAGPGRGRSCSGGSLTTDLAAHRVRVAGVLHRLPVGDAR 235
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: A9UUI3_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UUI3_MONBE) HSP 1 Score: 118 bits (296), Expect = 1.310e-23 Identity = 117/439 (26.65%), Postives = 185/439 (42.14%), Query Frame = 1
Query: 637 VTTAEETEVARWLGFRTIDLVAYVGAALQAGDVHAASIAWRRHARVDKGPGQPSESLTDSDDGYGDGSGSVGSEGRRLAAFLPEQLANVPVAGAPRLLGEWLRDEVLPALDVTGAMAVRDWAGQYSREVEAVEKRPHDALLFARAVADGSSRVLGSAAELLSVHSAELAGAEASAAAGRAGDGL----DAMHWKAWRRDG---------LDALGRTLGDLVYAWDYHGIRLPLSKFESLPRDLILFRVLDRVQSLECLPREMSHHVLPMAKRYGLDPDAVLLDYMLICTRVHGGGLAVKGAGGLLTEQRAVAVARCISSGDGGRSEIRSRAVLALANAASFPFSDGLRELVQDALSWGGPLAGELQEAARALRLSQVVQRYDVTGFSLGDAPRATRLLRHVLAQVHCRSALDDALQVANAYSHLHERSVYVEFLENLAS 1914
+T++ + A W FR DL+ + +L A + A+ W RH ES D LAA L +P A + L +LRDEV P L +W + +E EK A + G S + + + A + +A DGL +AM + G L + L DL + D G RL L +++ + ILF +L+RV + + +P + + V P A R+ LD DAVLL Y+ + G G RA+A+ C+ G +EI++ A + L A S P + L+++A +W E E R L L +++ Y ++ F++ + A RL+RH+ + +AL DA+QV AYSH+ VYV + +LA+
Sbjct: 542 MTSSSAFDSADWHRFRQTDLLRELTNSLAAHRIDVANTIWTRH-----------ESEYD------------------LAASADLILDAMPDALQSKFLIPFLRDEVFPRLQRQHHAFALEWLHTRATMMELTEKNEWPACAI-ELIETGESIIAANGFSKTNAQHARRLHSWHTAHPSTIVDGLCGRTNAMDGAQAEQAGPSVQLLASQLLHIKLALEDLRFLQDVSGFRLALGDYQTETPESILFALLERVAAADLIPEVLLNQVRPYAARHNLDLDAVLLRYI----KALASGAQTVAVTGSNWCSRALAIIGCL-----GTTEIKATATMVLMGAVSVPCPADVDALIEEARAWPHAQKSEFDEQYRILALRKMLLPYGISNFNISNTTLARRLVRHIACNLEQPTALQDAMQVVEAYSHIGHHDVYVHRIRHLAT 941
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: A0A835ZDW9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW9_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.520e-20 Identity = 104/345 (30.14%), Postives = 138/345 (40.00%), Query Frame = 1
Query: 667 RWLGFRTIDLVAYVGAALQAGDVHAASIAWRRHARVDKGPGQPSESLTDSDDGYGDGSGS------------VGSEGRRLAAFLPEQLANVPVAGAPRLLGEWLRDEVLPALDVTGAMAVRDWAGQYSREVEAVEKRPHDALLFARAVADGSSRVLGSAAELLSVHSAELAGAEASAAAGRAGDGLDAMHWKAWRRDGLDALGRTLGDLVYAWDYHGIRLPLSKFESLPRDLILFRVLDRVQSLECLPREMSHHVLPMAKRYGLDPDAVLLDYMLICTRVHGGGLAVKGAGGLLTEQRAVAVARCISSGDGGRSEIRSRAVLALANAASF--PFSDGLRELVQDA 1659
RW F D+ ++ LQAG+VHAA++ WRRHA SL + Y DG + V EG R+ LPE L +P+ R L WL+ E A R W G G +GD + L+ L L DL + WD H +RLPL ++E L + ++F+ LDRVQS LP+ + H LP+ RYGL D VLL Y C G +G + E+RA A+ARCIS+ + R A LALA AA+ S L LV+DA
Sbjct: 610 RWQWFMGCDVPGFMADCLQAGNVHAAAVLWRRHAI----------SLPPASASYDDGETATVTVSVTAVDPRVLEEGSRMVRGLPEMLHCIPITAPVRPLAAWLQAEQRRC-----RRARRGWRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGG--------------------CNGVSGDDVGGFGE-------LEGLAARLLDLAHLWDAHLLRLPLREYEGLAPEAVVFKALDRVQSPALLPQHVQQHALPLCARYGLSADDVLLAYARKCAAAVAGR-----SGAVAAERRAAAIARCISA-----QQARVAAALALARAAACNPDASPELTALVRDA 902
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: K3WD72_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD72_GLOUD) HSP 1 Score: 95.1 bits (235), Expect = 4.190e-17 Identity = 63/191 (32.98%), Postives = 98/191 (51.31%), Query Frame = 1
Query: 1339 VLDRVQSLECLPREMSHHVLPMAKRYGLDPDAVLLDYMLICTRVHGGGLAVKGAGGLLTEQRAVAVARCISSGDGGRSEIRSRAVLALANAASFPFSDGLRELVQ-DALSWGGPLAGELQEAARALRLSQVVQRYDVTGFSLGDAPRATRLLRHVLAQVHCRSALDDALQVANAYSHLHERSVYVEFLENL 1908
+LDRV S + L E+ +H + G D VL DY+ T + K E RA+ V I EIR+ A LAL + P+S L+ + DA+SWG E++E R + + ++ Y + F + D+ +RLL H+L+Q+ SALDDA+++ +AYSHLH ++F+EN+
Sbjct: 3 MLDRVSSPDQLHHEIDYHAKKYLRFCGSQADPVLRDYV---TELAESIQTAKST----EEARALVVLNSIDD-----IEIRADAALALLRSVLPPYSQKLKMFAKSDAMSWGSKRQEEIEEHLRLMEIQDMLMAYGIRQFDIADSRNVSRLLDHILSQISRTSALDDAMRLVDAYSHLHCERAILQFVENM 181
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: A0A6P8HTA8_ACTTE (kinetochore-associated protein 1-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HTA8_ACTTE) HSP 1 Score: 94.0 bits (232), Expect = 5.760e-16 Identity = 67/212 (31.60%), Postives = 113/212 (53.30%), Query Frame = 1
Query: 1276 HGIRLPLSKFESLPRDLILFRVLDRVQSLECLPREMSHHVLPMAKRYGLDPDAVLLDYML-ICTRVHGGGLAVKGAGGLLTEQRAVAVARCISSGDGGRSEIRSRAVLALANAASFPFSDGLRELVQDALSWGGPLAGELQEAARALRLSQVVQRYDVTGFSLGDAPRATRLLRHVLAQVHCRSALDDALQVANAYSHLHERSVYVEFLENL 1908
+ R+ L++F ++FR+LD V++ E LP+ M+ ++ P + LD D VLLDY+ + ++ G ++ + L E R +AV I +A L + A P+SD + +LV DA++ P EL+E R + L +V++ Y + + DA +A ++R +L + +A++DAL+V AYSHL E VYV L+ L
Sbjct: 62 YSCRISLAEFSKETTSTLVFRLLDSVKAAELLPQAMNKYIAPYMIHHSLDKDQVLLDYVKEMFVKISGSYSSLSNS---LWEARVIAVINYIKD-----KRAYCQATLEVMRHALVPWSDAVEKLVHDAMT-AYPNNLELKEQYRFVELKKVLRLYGMKSTQVPDAAKAKSIVRIILTRDE-PTAMEDALKVVRAYSHLSESDVYVFRLQKL 263
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: A0A067CXH4_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CXH4_SAPPC) HSP 1 Score: 88.6 bits (218), Expect = 2.430e-14 Identity = 79/255 (30.98%), Postives = 110/255 (43.14%), Query Frame = 1
Query: 1171 RAGDGLDAMHWKAWRRDGLDALGRTLGDLVYAWDYHGIRLPLSKFESLPRDLILFRVLDRVQSLECLPREMSHHVLPM-AKRYGLDPDAVLLDYMLICTRVHGGGLAVKGAGGLLTEQRA-----VAVARCISSGDGGRSEIRSRAVLALANAASFPFSDGLRELVQDALSWGGPLAGELQEAARALRLSQVVQRYDVTGFSLGDAPRATRLLRHVLAQVHCRSALDDALQVANAYSHLHERSVYVEFLENLASS 1917
R GDG + H D L AL L L Y + HG L L F+ I +LDRV + + E++ HV P+ A + D VL +Y +A K L + V + R S E R+ A LA A P+ + L DA +W ELQ R + L + Y + F DA A+R R + Q+ SALDDALQ+A A+ HLHE + V+F +N+ +S
Sbjct: 596 RHGDGHQSPH------DDLRALDVQLQQLAYLDEVHGFHLSLRAFQMASMAGIAMSMLDRVLVPDLMASELACHVQPLLALCDTVSLDDVLTEY-----------IAEKATSSQLLQTTEAHRCRVLIPRIESV------EKRAAAALAFLQAVRAPYDAEIVALAHDAGTWPSLCRVELQAQLRVMELQDMCVAYGLRPFLATDALFASRFCRFICGQIDRPSALDDALQLARAFRHLHEHRIVVQFSQNVLAS 827
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Match: T0QC21_SAPDV (Rod_C domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QC21_SAPDV) HSP 1 Score: 87.0 bits (214), Expect = 8.520e-14 Identity = 76/255 (29.80%), Postives = 111/255 (43.53%), Query Frame = 1
Query: 1171 RAGDGLDAMHWKAWRRDGLDALGRTLGDLVYAWDYHGIRLPLSKFESLPRDLILFRVLDRVQSLECLPREMSHHVLPM-AKRYGLDPDAVLLDYMLICTRVHGGGLAVKGAGGLLTEQRA-----VAVARCISSGDGGRSEIRSRAVLALANAASFPFSDGLRELVQDALSWGGPLAGELQEAARALRLSQVVQRYDVTGFSLGDAPRATRLLRHVLAQVHCRSALDDALQVANAYSHLHERSVYVEFLENLASS 1917
R GDG ++ H D L AL L L Y + HG L L F+ I +LDRV + + E++ HV P+ A + D VL +Y +A K L + V + R S E R+ A L+ A P+ + L +A W ELQ R + L + Y + F DA A+R R++ Q+ SAL+DALQ+A A+ HLHE + V+F +N+ +S
Sbjct: 596 RHGDGHESPH------DDLRALDVQLQQLAYLDEVHGFHLSLRAFQMASMAGIAMSMLDRVLVPDLMASELACHVQPLLALCDTVSLDDVLTEY-----------IAEKATSSQLLQTTEAHRCRVLIPRIESV------EKRAGAALSFLQAVRAPYDAAIVALAHEASVWPSLCRVELQAQLRVMELQDMCVAYGLRPFLATDALFASRFCRYICGQIDRHSALEDALQLARAFRHLHEHRIVVQFSQNVLAS 827 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig768.15686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig768.15686.1 >prot_H-paniculata_contig768.15686.1 ID=prot_H-paniculata_contig768.15686.1|Name=mRNA_H-paniculata_contig768.15686.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=699bp MVPSEFFADVAALLERLDSADALRRACVAAVGAALPSLDNVRELLEIVEAback to top mRNA from alignment at H-paniculata_contig768:21788..29963+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig768.15686.1 ID=mRNA_H-paniculata_contig768.15686.1|Name=mRNA_H-paniculata_contig768.15686.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8176bp|location=Sequence derived from alignment at H-paniculata_contig768:21788..29963+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig768:21788..29963+ >mRNA_H-paniculata_contig768.15686.1 ID=mRNA_H-paniculata_contig768.15686.1|Name=mRNA_H-paniculata_contig768.15686.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4194bp|location=Sequence derived from alignment at H-paniculata_contig768:21788..29963+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |