mRNA_H-paniculata_contig7624.15617.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5KJF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF8_9PHAE) HSP 1 Score: 218 bits (555), Expect = 1.790e-67 Identity = 115/234 (49.15%), Postives = 138/234 (58.97%), Query Frame = 1
Query: 19 KEGYWRYAEFEEQTVDVMDTLETLYPNQQLMIEVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWSTR----------------------------------------------------------RRVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
K+GYW Y +FEEQ DVMD LE + P+ Q++ EVDHS GH K R+D LHV NMNVKYGGKQ+ LR +VMTE LG EEAKMY G WST+ R+ LWERG ++DG+S V+DDMH++KVL +LPDF NE ALQ+LVESRGHILL SPK HP++AGVGIEYSWG SKQ FR ++N
Sbjct: 93 KDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKIN 326
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE) HSP 1 Score: 219 bits (557), Expect = 2.590e-67 Identity = 115/236 (48.73%), Postives = 139/236 (58.90%), Query Frame = 1
Query: 13 KNKEGYWRYAEFEEQTVDVMDTLETLYPNQQLMIEVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWSTR----------------------------------------------------------RRVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
+ K+GYW Y +FEEQ DVMD LE + P+ Q++ EVDHS GH K R+D LHV NMNVKYGGKQ+ LR +VMTE LG EEAKMY G WST+ R+ LWERG ++DG+S V+DDMH++KVL +LPDF NE ALQ+LVESRGHILL SPK HP++AGVGIEYSWG SKQ FR ++N
Sbjct: 65 RGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVCAPPPFFEWHAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKIN 300
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 200 bits (509), Expect = 3.130e-58 Identity = 118/300 (39.33%), Postives = 141/300 (47.00%), Query Frame = 1
Query: 1 LMHGKNKEGYWRYAEFEEQTVDVMDTLETLYPNQQLMIEVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWSTR----------------------------------------------------------------------------------------------------------------------RRVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
L +GK K+GYW Y FEEQ DV+D LE + P+ Q++ EVDHS GH K R+D LHV NMNVKYGGKQ+ LR +VMTEG LG EEAKMY G WST+ R+ LWERG ++DG+S V+DDMH++KVL +LPDF NE ALQ+LVESRGHILL SPK HP++AGVGIEYSWG SKQ FR +N
Sbjct: 196 LEYGKGKDGYWGYDLFEEQVEDVVDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGLEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVNPFFEWDTPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRRIN 495
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5L6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y6_9PHAE) HSP 1 Score: 197 bits (502), Expect = 5.870e-57 Identity = 97/164 (59.15%), Postives = 120/164 (73.17%), Query Frame = 1
Query: 1 LMHGKNKEGYWRYAEFEEQTVDVMDTLETLYPNQQLMIEVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWSTRR-----RVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHP 477
L +GK KEGYW Y +FEEQ DVMD LE + P+ Q++ EVDH+ GH K R+D L++ NMNVKY GKQ+ LR +VMTEG LG EEAKMY G+WST+ + LWERG ++DG+S V+D+MH++KVL +LPD NE ALQYLVESRGHILL SPK P
Sbjct: 445 LEYGKGKEGYWGYDQFEEQVEDVMDVLEHIDPDMQVVFEVDHASGHGKQREDGLYLSNMNVKYEGKQKVLRDSVMTEGCLGPEEAKMYFANGKWSTKFSEGAVQYLWERGWWKDGMSTRAGVSDEMHVEKVLQTLPDLKNERTALQYLVESRGHILLSSPKVSP 608
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 193 bits (491), Expect = 4.000e-55 Identity = 108/219 (49.32%), Postives = 129/219 (58.90%), Query Frame = 1
Query: 1 LMHGKNKEGYWRYAEFEEQTVDVMDTLETLYPNQQLMIEVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWST-------------------------------------RRRVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
L +GK K+GYW Y +FEEQ DVMD LE + P+ Q++ EVDHS GH K R+D LHV NMNVKYGGKQ+ LR +VMTE LG EEAKMY G WST R+ RG G +S DDMH++KVL +LPDF E AL++LVESRGHI L K HP++AGVGIEYSWG SKQ FR ++N
Sbjct: 351 LEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDTKNARGRSRKGAGVS----DDMHVEKVLHALPDFKIERTALEHLVESRGHIHL--SKCHPEVAGVGIEYSWGFSKQKFRRKIN 563
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.510e-52 Identity = 92/165 (55.76%), Postives = 117/165 (70.91%), Query Frame = 1
Query: 115 EVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWST---------------------RRRVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
E+DHS GH + R+D LHVGNMNVKYGGKQ+ LR TVMTEG LG EEAKMYL+ G+ + ++ LWERGL+++G++ S ++D+ +++KVL +L DF +E ALQYLVESRGHILLLSPK HP++AGVGIEYSWG SKQ FR + N
Sbjct: 453 EIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGDVAADGAGTKPRDKIKEGYEGKAKDSKQYLWERGLWKEGMNASVGISDEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYN 617
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE) HSP 1 Score: 177 bits (449), Expect = 1.780e-48 Identity = 103/268 (38.43%), Postives = 137/268 (51.12%), Query Frame = 1
Query: 1 LMHGKNKEGYWRYAEFEEQTVDVMDTLETLYPNQQLMIEVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWSTR--------------------------------------------------------------------------------------RRVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
L + KN++GY Y EF+EQ DV+D L P+ Q+++E+DHS GH + R+D LHVGNMNVKYGGKQ+ LR TV+TE LG EE KMYL+ G+WST ++ L ERG +++G++ S +AD+ +I+KVL +L ++ ALQYL ESRGHILLLSP +HP++AGVGIEYSWG SKQ FR + N
Sbjct: 490 LQYWKNRDGYRGYDEFKEQIEDVLDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKYGGKQKVLRDTVITEWCLGPEEGKMYLSNGKWSTEFPEGAEVYDMKLKVGDTQTSTFADGSPPPFYEWDAPGKDVKVARKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAQGSKQSLGERGWWKEGMNASVGIADEKNIEKVLQALTALESKRTALQYLAESRGHILLLSP-YHPEVAGVGIEYSWGFSKQRFRRKYN 756
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 176 bits (445), Expect = 1.190e-47 Identity = 107/316 (33.86%), Postives = 138/316 (43.67%), Query Frame = 1
Query: 1 LMHGKNKEGYWRYAEFEEQTVDVMDTLETLYPNQQLMIEVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWSTR--------------------------------------------------------------------------------------------------------------------------------------RRVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
L +GKNK+GYW Y EF+EQ P+ Q+++E+DHS GH + R+D LHVGNMNVK GGKQ LR T+MTEG LG +EAKMYL+ G+WST ++ LWERG +++G++ S +AD+ +++KVL +L DF +E ALQYLVESRGHILLLSPK HP++AGVGIEYSWG SKQ FR + N
Sbjct: 585 LQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKNGGKQTVLRDTIMTEGCLGPKEAKMYLSNGKWSTEFTEGAEVYDMKLKVGDTQTSTFAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVRKAKRKSNAGAGVGAGDEGAADGAGTKPRDKIKEGYEGKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYN 900
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 174 bits (440), Expect = 5.760e-47 Identity = 93/195 (47.69%), Postives = 110/195 (56.41%), Query Frame = 1
Query: 136 HAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWSTR----------------------------------------------------------RRVLWERGLFEDGISLSKSVADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
H K R+D LHV NMNVKYGGKQ+ LR +VMTEG LG EEAKMY G WST+ R+ LWERG ++DG+S V+DDMH++KVL +LPDF NE ALQ+LVESRGHILL SPK HP++AGVGIEYSWG SKQ FR ++N
Sbjct: 715 HGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGPEEAKMYFANGRWSTKFREGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKIN 909
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 159 bits (403), Expect = 5.970e-42 Identity = 100/292 (34.25%), Postives = 128/292 (43.84%), Query Frame = 1
Query: 70 MDTLETLYPNQQLMIEVDHSVGHAKYRQDALHVGNMNVKYGGKQRALRTTVMTEGSLGSEEAKMYLNGGEWSTR--------------------------------------------------------------------------------------RRVLWERGLFEDGISLSKS-----------------------------------------------VADDMHIDKVLSSLPDFANEEPALQYLVESRGHILLLSPKFHPQMAGVGIEYSWGMSKQTFRGELN 546
+D L+ PN Q+++E+DHS GH + R+D LHVGNMNVKYGGKQ+ LR TVMTEG LG EEAKMYL+ G+WST ++ LWERG +++G++ S +AD+ +++KVL +L DF +E ALQYLVESRGHILLLSPK HP++AGVGIEYSWG SKQ FR + N
Sbjct: 969 LDVLDVFEPNMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGAEVYDMKLKVGDTQTSTFAAGSPPPFYEWDAPRKDVKVARKAKRXXXXXXXXXXGDEGATDGAGTKPMDMIKEGYEGKAKGSKKYLWERGWWKEGMNASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYN 1260 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7624.15617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7624.15617.1 >prot_H-paniculata_contig7624.15617.1 ID=prot_H-paniculata_contig7624.15617.1|Name=mRNA_H-paniculata_contig7624.15617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp MHGKNKEGYWRYAEFEEQTVDVMDTLETLYPNQQLMIEVDHSVGHAKYRQback to top mRNA from alignment at H-paniculata_contig7624:3137..3934- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7624.15617.1 ID=mRNA_H-paniculata_contig7624.15617.1|Name=mRNA_H-paniculata_contig7624.15617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=798bp|location=Sequence derived from alignment at H-paniculata_contig7624:3137..3934- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7624:3137..3934- >mRNA_H-paniculata_contig7624.15617.1 ID=mRNA_H-paniculata_contig7624.15617.1|Name=mRNA_H-paniculata_contig7624.15617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at H-paniculata_contig7624:3137..3934- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |