mRNA_H-paniculata_contig7596.15587.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: D8LTZ3_ECTSI (Beta-1,4-galactosyltransferase, family GT7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ3_ECTSI) HSP 1 Score: 305 bits (782), Expect = 2.290e-99 Identity = 158/243 (65.02%), Postives = 172/243 (70.78%), Query Frame = 1
Query: 280 HDGKKLPPGWVKCESSKYPGAFYFFDTQTGKSLWFPPENEGAGQQLAGRLRGEEGTSPSRSAKRPRPG-----SRIDAYGSGAVKVAVIVPFRDGDPAQRRSEHLRKFVPYMESFL-RNQRAQVAEFRTFIVEQSADDR-KFNRGKLLNIGFDLARSEGFTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRIVEAR 987
HDG+KLPPGWV+C SSK+ G YFFDTQTG+S WF P R EE S S S + G KVAV+VP+RD DPAQRRS HL +FVPYME FL R EFR ++VEQS DD KFNRGKLLNIGFDLAR EG FL HDVDLLPS +L WY T PERPVH+ARVWKQYSNNPKYFGGVV+FNR+DFEAINGFPNTFWGWGGEDDEMYSRIVEAR
Sbjct: 4 HDGRKLPPGWVRCVSSKF-GRDYFFDTQTGESTWFAPT--APXXXXXSRXXXEEEDLESFSXXXXXXXXXXGPSSLPPQDGGKTKVAVVVPYRDLDPAQRRSAHLEQFVPYMEDFLERAVGGAGGEFRVYVVEQSTDDGLKFNRGKLLNIGFDLARKEGAQVFLLHDVDLLPSNELARWYATVPERPVHVARVWKQYSNNPKYFGGVVAFNRKDFEAINGFPNTFWGWGGEDDEMYSRIVEAR 243
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: A0A836CFW6_9STRA (Galactosyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW6_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.950e-73 Identity = 122/239 (51.05%), Postives = 153/239 (64.02%), Query Frame = 1
Query: 292 KLPPGWVKCESSKYPGAFYFFDTQTGKSLWFPPEN--EGAGQQLAGRLRGEEGTSPSRSAKRPRPGSRIDAYGSGAV------KVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRNQRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLARSEGFTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRIVEA 984
+LP GWV S Y G Y+F+T TG++ W P +G A R + + KR + GSGA +VA+IVPFRD QRR+EHL +FVP M F+ AQ EF FIVEQS D RKFNRGKLLNIG+D+A+++G+ + HDVDLLPS +LG WY P +PVHIAR W +YSNNP YFGG+V+ + +D+EAING+PNTFWGWGGEDDEM RI +A
Sbjct: 7 ELPEGWVSAPSRTYGGETYYFNTFTGEATWVYPSGAASSSGGAPANHKRALSEAADGPALKRQH--TEAAGQGSGAAQGEEPPRVAIIVPFRDQHAEQRRAEHLARFVPAMTQFML---AQGVEFHIFIVEQSEDGRKFNRGKLLNIGYDIAKNDGYNTLVLHDVDLLPSAELGPWYAAYPHQPVHIARRWPRYSNNPDYFGGIVAISIKDYEAINGYPNTFWGWGGEDDEMMLRIKDA 240
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: A0A6U4I093_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4I093_9STRA) HSP 1 Score: 228 bits (580), Expect = 3.280e-69 Identity = 122/235 (51.91%), Postives = 145/235 (61.70%), Query Frame = 1
Query: 295 LPPGWVKCESSKYPGAFYFFDTQTGKSLWFPPENEGAGQQLAGRLRGEEGTSPSRSAKRPRPGSRIDAYGSGAVKVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRNQRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLARSEGFTAFLFHDVDLLPSEDLGVWYTTTP-ERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRIVEARRRM 996
LPPGWVK SS++ +Y+FDT TG S W PP PSR KRPRP G +VAVIVPFRD AQ+R+EHLRKF P+M +FL + + FI+EQS D KFNRGKLLNIGFD+A EGF F+FHDVDLLP L Y P E P+HIA +W +YS+NP+Y GG+V+F+R F INGFPN FWGWGGEDDEMY R+ R
Sbjct: 5 LPPGWVKALSSEHQ-RYYWFDTATGASQWMPPXXXXXXXXXXX---------PSR--KRPRPSD-------GPPRVAVIVPFRDLHVAQKRAEHLRKFAPHMHAFLGGD---ASGHKVFIIEQSDDGLKFNRGKLLNIGFDIAAREGFDLFVFHDVDLLPHRALAPLYMRDPGEHPLHIAGLWDRYSDNPRYCGGIVNFSRAQFRRINGFPNFFWGWGGEDDEMYLRVEAVGMRF 217
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: A0A7S4M9S3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M9S3_9STRA) HSP 1 Score: 224 bits (572), Expect = 9.110e-69 Identity = 123/254 (48.43%), Postives = 157/254 (61.81%), Query Frame = 1
Query: 268 MSTMHDGKKLPPGWVK--CESSKYPGAFYFFDTQTGKSLWFPPENEGAGQQLAGRLRGEEGTSPSRSAKRPRPG-----SRIDAYGSGAVKVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRN--QRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLARSE---GFTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRIVEARRR 993
MS+ +D + LP GW +S + P YF T + W P ++ + R EE T + AKR S+ S A VA+IVP+RD AQ R+ HLR+FVP+M FL+ +R V+++ +IVEQS D RKFNRGKLLNIGFDLAR + G F+FHDVDLLP +DLG WY P++P+HIARVW +YSNNPKYFGG+VSF+ D ING+PNTFWGWGGEDDEM R + +
Sbjct: 1 MSSSND-RPLPSGWSSGFSKSKQKP---YFICGATNHTQWHFPTDDDVADPKGAKHRVEE-TMRAELAKRSASSGGGGPSQKRPKSSDAASVAIIVPYRDLHAAQNRARHLRQFVPHMLQFLKKLKRRGLVSDYHVYIVEQSDDGRKFNRGKLLNIGFDLARRDRRLGHNVFIFHDVDLLPGDDLGEWYAKFPQKPLHIARVWGRYSNNPKYFGGIVSFSAADMRKINGYPNTFWGWGGEDDEMQKRCEKTNMK 249
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: B7G071_PHATC (Galactosyl transferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G071_PHATC) HSP 1 Score: 227 bits (578), Expect = 2.230e-68 Identity = 125/261 (47.89%), Postives = 157/261 (60.15%), Query Frame = 1
Query: 268 MSTMHDGKKLPPGWVKCESSKYPGAFYFFDTQTGKSLWFPPENEGAGQQLAGRLRGE---------EGTSPSRSAKRPR--PGSRIDAYGSGAV----------KVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRN--QRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLARSE--GFTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRI 975
MS M+ LPPGW + S+ FYF +T + W P A L G+ R E + S + KRPR PG + +V VAVIVP+RD AQ+R+ HL KFVP+M+ F + +V+++ +I+EQS D RKFNRGKLLNIGFDLAR F+FHDVDLLP +DLG WY P+ P+HIARVW +YSNNPKYFGGVVSF+ D++ ING+PNTFWGWGGEDDEM R+
Sbjct: 1 MSDMNRDAPLPPGWSRGYSTSQKRTFYFHQ-ETKHTQWHFPTASEAKDPLKGKQRAELNKDREKKRQHEDSSGADKRPRGSPGEYMRKTVDTSVDDILELADSTSVAVIVPYRDIHSAQQRAAHLAKFVPHMQRFFNRLLKSGKVSDYHFYIIEQSDDGRKFNRGKLLNIGFDLARKSKRSHDVFIFHDVDLLPQDDLGSWYAKFPKSPIHIARVWGRYSNNPKYFGGVVSFSSSDYKRINGYPNTFWGWGGEDDEMQKRL 260
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: A0A7S4HUL3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HUL3_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.290e-67 Identity = 123/254 (48.43%), Postives = 157/254 (61.81%), Query Frame = 1
Query: 268 MSTMHDGKKLPPGWVK--CESSKYPGAFYFFDTQTGKSLWFPPENEGAGQQLAGRLRGEEGTSPSRSAKRPRPG-----SRIDAYGSGAVKVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRN--QRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLARSE---GFTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRIVEARRR 993
MS+ +D + LP GW +S + P YF T + W P ++ + R EE T + AKR S+ S A VA+IVP+RD AQ R+ HLR+FVP+M FL+ +R V+++ +IVEQS D RKFNRGKLLNIGFDLAR + G F+FHDVDLLP +DLG WY P++P+HIARVW +YSNNPKYFGG+VSF+ D ING+PNTFWGWGGEDDEM R + +
Sbjct: 1 MSSSND-RPLPSGWSSGFSKSKQKP---YFICGATNHTQWHFPTDDDVADPKGAKHRVEE-TMRAELAKRSASSGGGGPSQKRPKSSDAASVAIIVPYRDLHAAQNRARHLRQFVPHMLQFLKKLKRRGLVSDYHVYIVEQSDDGRKFNRGKLLNIGFDLARRDRRLGHNVFIFHDVDLLPGDDLGEWYAKFPQKPLHIARVWGRYSNNPKYFGGIVSFSAADMRKINGYPNTFWGWGGEDDEMQKRCEKTNMK 249
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: A0A2R5GHL6_9STRA (Beta-1,4-galactosyltransferase 4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHL6_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.240e-66 Identity = 125/258 (48.45%), Postives = 154/258 (59.69%), Query Frame = 1
Query: 283 DGKKLPPGWVKCESSKYPGAFYFFDTQTGKSLWFPPENEGAGQQLAGRLRGEEGTSPSRSAKRPRPGSRIDAYGS---------GAV------KVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRNQRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLA----RSEG-FTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRIVEARRRM 996
D + LP GW +C SK Y+F TGKS+W E A E TS S KR R S S GA +VA+IVPFRD AQ+R E L KFVP+M FL + + ++A F FIVEQS D RKFNRGKLLNIGF +A +G F +F+FHDVDLLP E L WY P P+HIA+ W +Y+NNPKYFGG+V+F+R+D+ I+GFPNTFWGWGGEDDE+ R+ AR R+
Sbjct: 21 DHRALPQGWEQC-MSKSQNRIYYFQKATGKSVWTRKEVFDA-----------ERTSESDRKKRDRDASSDHVNDSDLKRSKRQGGAEDRDDRRRVAIIVPFRDLHQAQKRKEQLDKFVPHMHQFLSDNK-EIASFHIFIVEQSDDGRKFNRGKLLNIGFKIAADPDHEDGPFDSFIFHDVDLLPQEALKPWYAKQPNVPLHIAKCWGRYNNNPKYFGGIVAFSRQDYTRIDGFPNTFWGWGGEDDELQKRVAAARLRI 265
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: A0A1Z5KC44_FISSO (Beta-1,4-galactosyltransferase 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC44_FISSO) HSP 1 Score: 221 bits (564), Expect = 2.160e-66 Identity = 117/246 (47.56%), Postives = 153/246 (62.20%), Query Frame = 1
Query: 280 HDGKKLPPGWVKCESSKYPGAFYFFDTQTGKSLW-FPPENEGAGQQLA--------GRLRGEEGTSPSRSAKRPRPGSRIDAYGSGAVKVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRN--QRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLAR---SEGFTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRI 975
H LPPGW + S+ FYF ++T + W FP +E A R + + T+ AKRPR S A VA+IVPFRD AQ+R+ HL++F+P+M FL + + +++ + +I+EQS D RKFNRGKLLNIGFD+AR + F+FHDVDLLP LG WY P+RP+HIARVWK+YSNNPKYFGG VSF+ D++ ING+PN +WGWGGEDDEM R+
Sbjct: 7 HINDPLPPGWSRGFSNSQKRTFYFH-SETKHTQWHFPTASEAKDPMKALERANAAKEREKRKAATTAPPEAKRPRSESDNILEDLEASSVAIIVPFRDLHAAQKRAAHLQQFIPHMVQFLGSLTKDGKISNYHIYIIEQSDDQRKFNRGKLLNIGFDVARKAAARNHDVFIFHDVDLLPDAALGDWYAKFPKRPIHIARVWKRYSNNPKYFGGAVSFSSSDYKRINGYPNNYWGWGGEDDEMQRRL 251
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: A0A7S3LF72_9STRA (Hypothetical protein (Fragment) n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF72_9STRA) HSP 1 Score: 215 bits (547), Expect = 9.140e-65 Identity = 117/263 (44.49%), Postives = 154/263 (58.56%), Query Frame = 1
Query: 268 MSTMHDGKKLPPGWVKCESSKYPGAFYFFDTQTGKSLW-FPPENEGAGQQLAGRLRGEE----------------GTSPSRSAKRPRPGSRIDAYG------SGAVKVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRN--QRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLARSEG--FTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRI 975
MS + LPPGW + S+ FYF +T + W FP +E ++A + E S + KR R + + + A VAVIVP+RD AQ+R+ HL++FVP+M F ++ V+ + +I+ QS D RKFNRGKLLNIGFDLA G F+FHDVDLLPS +LG+WY P +P+HIARVW +YSNN KYFGGVVSF++ DF ING+PNTFWGWGGEDDE+ +R+
Sbjct: 1 MSDPNANAPLPPGWSREYSNSQKRHFYFHK-ETNHTQWHFPTASEAKDPKVAEKRAREAKERXXXXXXXXXXXAGAASQQPAVKRARSATNTKSNDDDFLELADATSVAVIVPYRDLHVAQKRAAHLKQFVPWMHQFFDKLQRKGLVSGYHVYIINQSDDGRKFNRGKLLNIGFDLATKSGRKHDVFIFHDVDLLPSPELGIWYAKMPTKPIHIARVWDRYSNNKKYFGGVVSFSKSDFRRINGYPNTFWGWGGEDDELQNRL 262
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Match: A0A7S2R9Z3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R9Z3_9STRA) HSP 1 Score: 215 bits (548), Expect = 3.690e-64 Identity = 111/240 (46.25%), Postives = 149/240 (62.08%), Query Frame = 1
Query: 286 GKKLPPGWVKCESSKYPGAFYFFDTQTGKSLWFPPENEGAG--QQLAGRLRGEEGTSPSRSAKRPRPGSRIDAYGSGAVKVAVIVPFRDGDPAQRRSEHLRKFVPYMESFLRNQRAQVAEFRTFIVEQSADDRKFNRGKLLNIGFDLA----RSEGFTAFLFHDVDLLPSEDLGVWYTTTPERPVHIARVWKQYSNNPKYFGGVVSFNREDFEAINGFPNTFWGWGGEDDEMYSRIVEAR 987
G +LP GW + E S+ YFF T KS+W E A + + + EE S+ K+ +P + + VA+IVPFRD AQ+RS+HL+KF+P+ME+FL + F FIVEQS D +KFNRGKLLNIGF A F +F+FHDVDLLP E + WY P+ P+HIAR W +Y+NNP YFGG+V+F++EDFE I+GFPN + GWGGEDDE+ R+ ++
Sbjct: 2 GDELPIGWTR-EFSRSQAREYFFHAATRKSVWKREEIPTAATDKSVGDKRAPEEAAGSSQQVKKSKPDN------TPKTSVAIIVPFRDQHAAQKRSQHLKKFIPHMEAFLAETPG-IVNFHVFIVEQSEDGKKFNRGKLLNIGFKYACEFDTPHPFNSFIFHDVDLLPQEPVKKWYAKYPKYPIHIARCWGRYNNNPDYFGGIVAFSKEDFELIDGFPNLYAGWGGEDDELQKRVAASK 233 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7596.15587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7596.15587.1 >prot_H-paniculata_contig7596.15587.1 ID=prot_H-paniculata_contig7596.15587.1|Name=mRNA_H-paniculata_contig7596.15587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp MSTMHDGKKLPPGWVKCESSKYPGAFYFFDTQTGKSLWFPPENEGAGQQLback to top mRNA from alignment at H-paniculata_contig7596:159..4610- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7596.15587.1 ID=mRNA_H-paniculata_contig7596.15587.1|Name=mRNA_H-paniculata_contig7596.15587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4452bp|location=Sequence derived from alignment at H-paniculata_contig7596:159..4610- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7596:159..4610- >mRNA_H-paniculata_contig7596.15587.1 ID=mRNA_H-paniculata_contig7596.15587.1|Name=mRNA_H-paniculata_contig7596.15587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig7596:159..4610- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |