prot_H-paniculata_contig759.15579.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig759.15579.1
Unique Nameprot_H-paniculata_contig759.15579.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length341
Homology
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: D8LML1_ECTSI (Heterogeneous nuclear ribonucleoprotein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML1_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 8.510e-123
Identity = 231/295 (78.31%), Postives = 242/295 (82.03%), Query Frame = 0
Query:   57 NAQVPQ-MGHQQSIMSQNMGXXXXXXXXXXXXXXXXXXXXGPG------NVQGS-MMGG--IPGMGMGDYQLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVGHIQSQNMSGA-RQGGSGGMSHGGXXXXXXXXXXXXXGAPAVHTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVRHMNRT 340
            N QVPQ M  QQ IMSQ   XXXXXXXXXXXXXXXXXXX G G      NVQG+ MMGG  +  M MGDY LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMV R DGRGAGEAIVVLPN MEMQMALSRDKQHMGRRYIEIFQSKRMDYY+A+VG +QSQNM G  RQ          XXXXXXXXX      P VHTGVIRMRGLPFSATKQDV+NFFQG+PV +D IQFVVRGDGRVTGEAFVSF S ++SE+AM RNGNHMGTRYVELF STPEEIVRHMNRT
Sbjct:   11 NGQVPQQMAPQQGIMSQGXXXXXXXXXXXXXXXXXXXXXGGVGXXXXXXNVQGAGMMGGGAMSTMSMGDYSLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRADGRGAGEAIVVLPNLMEMQMALSRDKQHMGRRYIEIFQSKRMDYYSAVVGQLQSQNMGGMQRQXXXXXXXXXXXXXXXXXXXPDGMAMPVVHTGVIRMRGLPFSATKQDVLNFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFSSPAESEAAMSRNGNHMGTRYVELFASTPEEIVRHMNRT 305          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: A0A836CJZ5_9STRA (RRM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ5_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.260e-90
Identity = 150/245 (61.22%), Postives = 173/245 (70.61%), Query Frame = 0
Query:   96 GPGNVQGSMMGGIPGMGMGDYQ-LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVGHIQSQNMSGARQGGSGGMSHGGXXXXXXXXXXXXXGAPAVHTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVRHMNR 339
            GP      M GG   MG G    LE+VLGPFPCVRLRG+PFEAT+DDVLRFFQGL  +DVVM++R DGRGAGEA+V+  NHM++ MALSRDKQHMGRRYIEIFQSKR DYY A      SQ    A   G  G                     A HTGVIRMRGLPFSATK DV+NFFQGL V D+ +QFVVRGDGRVTGEAFV+  S +++E+AMQRNG++MG+RY+ELFPS  EE  RH +R
Sbjct:    5 GPAGGGMQMAGGAVPMGGGRADALEEVLGPFPCVRLRGMPFEATVDDVLRFFQGLTVVDVVMILRGDGRGAGEALVLFANHMDLNMALSRDKQHMGRRYIEIFQSKRADYYHA------SQGSGSAAATGQAGT--------------------AEHTGVIRMRGLPFSATKADVVNFFQGLNVLDESVQFVVRGDGRVTGEAFVTLSSPAEAEAAMQRNGSNMGSRYIELFPSAIEEAARHTSR 223          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: A0A7S4NCM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCM0_9STRA)

HSP 1 Score: 194 bits (493), Expect = 4.210e-55
Identity = 124/304 (40.79%), Postives = 155/304 (50.99%), Query Frame = 0
Query:  107 GIPGMGMGDYQ---LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVG-----------------HIQSQNMSG-----------------------ARQGG--------------SGGMSHGGXXXXXXXXXXXXXGAPAV-----------HTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVRHMNRT 340
            G+P  G G++    LE VLG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V   D   +G GEA V+L NHM+ QMAL RD+Q+MG RYIE+FQ +R DYY AI                   H+      G                       AR  G              SG    GG             G  A            HTG +RMRGLPFSA+K++VI FF+G    D+ I   VR DGR TGE +V+F S  D++ AM  + N MG+RY+ELF S  EE  R M+RT
Sbjct:   99 GVPPGGSGEHSSDMLEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHRYIEVFQGRRSDYYAAIAAQFFQNKENLVDADRRGEHVMPDEAGGGPVWGGVAAVPAQTLNHPASMQQARPQGAVMPGNGVIGETKKSGAGVRGGQGIRPDQGSMGHMGTRAPSHRGGGIREGEHTGYLRMRGLPFSASKEEVIGFFKGYNTVDESICLTVRSDGRATGEGYVAFMSPDDAKEAMSLHRNTMGSRYIELFISNEEEHTRAMSRT 402          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: C1MRF4_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MRF4_MICPC)

HSP 1 Score: 184 bits (467), Expect = 2.520e-53
Identity = 111/235 (47.23%), Postives = 144/235 (61.28%), Query Frame = 0
Query:  107 GIPGM-GMGDYQLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVGHIQSQNMSGARQGGSGGMSHGGXXXXXXXXXXXXXGAPAVHTGVIRMRGLPFSATKQDVINFFQGL-----PVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVR 335
            G PG  G G + +E V   FP VRLRGLPF A+  DV  FFQGL P+DV +++R DGR  GEA VVL N M M++AL +++  MGRRYIE+F+SK+ DYY A+   +   +  G   GG GG  +               G  A HTGV+++RGLPFSATK D+I FF        P+  D I  V+  DGR +G AFV F S  D+++AM ++ + MGTRYVELFPS+ EE  R
Sbjct:    8 GFPGARGPGGFGVEKV---FPVVRLRGLPFNASEYDVQEFFQGLEPVDV-LIVRRDGRATGEAYVVLANQMLMEVALQKNRGPMGRRYIEVFRSKKQDYYHAVSIAVNEPDY-GNGNGGQGGGYY-------------DNGPLAEHTGVLKLRGLPFSATKDDIITFFDDKSLGVSPLVHDSIHIVLSVDGRPSGVAFVEFVSAEDAKTAMIKDRSSMGTRYVELFPSSREEATR 224          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: A0A7S2WJG1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJG1_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.260e-52
Identity = 126/325 (38.77%), Postives = 158/325 (48.62%), Query Frame = 0
Query:   97 PGNVQGS--MMGGIPGMGMGDYQ--LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVG-----------------------HIQSQNMSGA--------------RQGGSGGMSHGGXXXXXXXXXXXXXGAPAV-----------------------------------------HTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVRHMNR 339
            PG + GS  +  G+ GM MG     LE VLGPFPC RLRGLPF+A  +DVL FFQGLV LDVV+V    GRG+GEA VV PN M+ Q+AL RD+Q MG RYIE+FQ KR DYY AI                          +Q    SG               +Q GSGG+S+               GA                                            HTG +RMRGLPFSA+K+D+  FF+     +D I    RGDGR TGE +++F   +D+E AM  + + MG+RY+ELF S  EE  R ++R
Sbjct:   87 PGALDGSGLLHSGLSGMQMGTSNDPLEAVLGPFPCARLRGLPFDAMPEDVLAFFQGLVVLDVVVVANSFGRGSGEAFVVFPNPMDFQVALQRDRQSMGHRYIEVFQGKRSDYYAAIASLFKQAGQSELPAEGETIRNTQDSSVQGNAWSGPAPPSSPDAVLIPLMQQLGSGGVSN---HAPGTTAVGSNAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIQVGEHTGYLRMRGLPFSASKKDIFEFFKEYKPIEDSIVLTYRGDGRATGEGYIAFNQPNDAEDAMSLHKSTMGSRYIELFISHKEEHARAVSR 408          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: A0A7R9WKK8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKK8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.590e-51
Identity = 122/322 (37.89%), Postives = 164/322 (50.93%), Query Frame = 0
Query:  100 VQGSMMG-GIPGMGMGDYQ---LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAI----------------------------------VGHIQSQNMS----------GARQGGSG-------------------------------GMSHGGXXXXXXXXXXXXXGAPAVHTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVRHMNRT 340
            ++GS++  G+P    G++    LE VLG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V   D   +G GEA V+L NHM+ QMAL RD+Q+MG RYIE+FQ +R DYY AI                                  VG + +Q ++          GA   G+G                               G SH G                  HTG +RMRGLPFSA+K++V  FF+G    ++ +   VR DGR TGE +V+F S  D+++AM  + N MG+RY+ELF S  EE  R M+RT
Sbjct:   73 MEGSLLPLGVPPGVSGEHSSDMLEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHRYIEVFQGRRSDYYAAIAAQFFQNKENVVDSDRQVEHEIPEEARAGPAWGGVGTVPAQQLNHPPMPQARPQGAVVPGNGVIGEMKKNGAGIRGGQXXXXXXXXXXXXXXRGPSHRGGGIREGE-----------HTGYLRMRGLPFSASKEEVTEFFKGYNAVEESVCLTVRSDGRATGEGYVAFLSPDDAKNAMTLHRNTMGSRYIELFISNKEEHTRAMSRT 383          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: A0A822YFJ2_NELNU (RRM domain-containing protein n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822YFJ2_NELNU)

HSP 1 Score: 180 bits (456), Expect = 3.050e-51
Identity = 97/211 (45.97%), Postives = 133/211 (63.03%), Query Frame = 0
Query:  124 PFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVGHIQSQNMSGARQGGSGGMSHGGXXXXXXXXXXXXXGAPAV-HTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEI 333
            PFP VRLRGLPF+ T  DVL FF GL  +DV+ V + +GR  GEA  VL   +++  A+ R++Q+MGRRYIE+F+SKR +YY A+   +        R+GG  G S+               G  +V H+GV+R+RGLPFSA K DVI FF+   +++D I      DGR TGEAFV F S  DS++AM ++   +G+RY+ELFPS+ EE+
Sbjct:   60 PFPAVRLRGLPFDCTEADVLEFFHGLDIIDVLFVHK-NGRFTGEAYCVLGYPLQVDFAIQRNRQNMGRRYIEVFRSKRQEYYKAVANEVSDARGGSPRRGGPRGRSY-------------DDGKDSVEHSGVLRLRGLPFSAGKDDVIEFFKDFKLSEDTIHITFNSDGRPTGEAFVEFASPEDSKAAMAKDRMTLGSRYIELFPSSHEEL 256          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: C1E0A7_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E0A7_MICCC)

HSP 1 Score: 177 bits (450), Expect = 1.640e-50
Identity = 104/229 (45.41%), Postives = 133/229 (58.08%), Query Frame = 0
Query:  125 FPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVGHIQSQNMSGAR-QGGSGGMSHGGXXXXXXXXXXXXX-----GAPAV------HTGVIRMRGLPFSATKQDVINFFQG------LPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVR 335
            FP VRLRGLPF A   D+L FFQGL P+DV +++R DGR  GEA V+  N M+M  AL +++  MGRRYIE+F+SK+ DYY A+   +      G    GG  G++ G                   GAPA       HTGV++MRGLPFSATK D+I F+         P+  D I  V   DGR +G AFV F S  D+++AM R+   MG+RYVELFPS+ EE  R
Sbjct:   18 FPVVRLRGLPFNAGEFDILEFFQGLDPVDV-LIVRRDGRATGEAYVLFANPMQMDFALQKNRGPMGRRYIEVFRSKKQDYYYAVAHAVNEPTPHGTDFYGGDNGLASGAGHLAHVAGVGGPAPPVPHGAPAAVRPPQEHTGVLKMRGLPFSATKDDIITFYDDPALSVTAPLTHDSIHIVTSLDGRPSGMAFVEFASAEDAKAAMSRDRCTMGSRYVELFPSSREEATR 245          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: A0A7N0TIK1_KALFE (RRM domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TIK1_KALFE)

HSP 1 Score: 178 bits (451), Expect = 2.390e-50
Identity = 93/216 (43.06%), Postives = 136/216 (62.96%), Query Frame = 0
Query:  124 PFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVGHIQSQNMSGARQGGSGGMSHGGXXXXXXXXXXXXXGAPAVHTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVRHMNR 339
            PFP VR+RGLPF  T +D+  FF GL  +DV++V +  GR  GEA  V    +++ +AL +D+Q+MG RY+E+F SKR +YY AI   +     +GA        +                   AVHTGV+RMRGLP+SA+K D++NFF+   +++D I FV+  +GR +G+AFV F S  DS++AM ++   +G+RYVELFPSTPEE+ R +++
Sbjct:   61 PFPVVRIRGLPFYCTEEDISHFFYGLDVVDVLLVHK-HGRFTGEAYCVFGYPLQVDIALRKDRQNMGSRYVEVFPSKRQEYYKAIANEVHDAR-AGASPSPKTNFNDESKPHSHDKKPANEKKDSAVHTGVLRMRGLPYSASKDDIVNFFKDFTLSEDAIHFVLNWEGRPSGDAFVKFASAEDSKAAMVKDRMSVGSRYVELFPSTPEEMSRALSK 274          
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Match: A0A5K1CJV8_9MAGN (RRM domain-containing protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1CJV8_9MAGN)

HSP 1 Score: 175 bits (443), Expect = 1.430e-49
Identity = 97/231 (41.99%), Postives = 137/231 (59.31%), Query Frame = 0
Query:  110 GMGMGDYQLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMDYYTAIVGHIQSQNMSGARQGGSGGMSHGGXXXXXXXXXXXXXGAPAVHTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVSFGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVRHMNRT 340
            GMG G Y     + PFP VRLRGLPF+ +  DV +FF GL  +DV++V + +GR +GEA VV    M+ + AL RD+Q+MGRRYIE+F+  + DYY AI   + S  ++  R                             HT ++++RGLP+S TK ++I+FF+   + +  I    R DG+ TGEAFV F S SDS+ AM ++   +G+RYVELFPSTPEE+ R  +R+
Sbjct:   30 GMGGGYY-----MQPFPVVRLRGLPFDCSDIDVFKFFAGLDVVDVLLVNK-NGRFSGEAFVVFAGAMQAEFALQRDRQNMGRRYIEVFRCSKQDYYNAIADEVNSDGINDYRS-------------PPRYSRRSIDKEHMEHTEILKLRGLPYSVTKSEIIDFFKDFELTEANIHIASRYDGKATGEAFVEFASASDSKKAMCKDKMMIGSRYVELFPSTPEELSRAASRS 241          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig759.15579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LML1_ECTSI8.510e-12378.31Heterogeneous nuclear ribonucleoprotein, putative ... [more]
A0A836CJZ5_9STRA1.260e-9061.22RRM domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S4NCM0_9STRA4.210e-5540.79Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
C1MRF4_MICPC2.520e-5347.23Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A7S2WJG1_9STRA1.260e-5238.77Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9WKK8_9STRA2.590e-5137.89Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A822YFJ2_NELNU3.050e-5145.97RRM domain-containing protein n=2 Tax=Nelumbo nuci... [more]
C1E0A7_MICCC1.640e-5045.41Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7N0TIK1_KALFE2.390e-5043.06RRM domain-containing protein n=1 Tax=Kalanchoe fe... [more]
A0A5K1CJV8_9MAGN1.430e-4941.99RRM domain-containing protein (Fragment) n=2 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 254..326
e-value: 8.8E-4
score: 28.6
coord: 127..197
e-value: 0.0044
score: 26.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 255..321
e-value: 9.1E-5
score: 22.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 253..330
score: 9.951
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 247..340
e-value: 6.4E-26
score: 92.4
coord: 124..213
e-value: 2.6E-21
score: 77.5
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 124..245
NoneNo IPR availablePANTHERPTHR13976:SF22AT27789Pcoord: 12..203
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 12..203
NoneNo IPR availablePANTHERPTHR13976:SF22AT27789Pcoord: 124..245
NoneNo IPR availablePANTHERPTHR13976:SF22AT27789Pcoord: 251..336
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 251..336
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 114..204
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 246..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig759contigH-paniculata_contig759:1986..30001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig759.15579.1mRNA_H-paniculata_contig759.15579.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig759 1164..32698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig759.15579.1 ID=prot_H-paniculata_contig759.15579.1|Name=mRNA_H-paniculata_contig759.15579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=341bp
MEGGYGQAMGMRQGQGQGMSAGMGQGMGQGMQQGGYGVAANGQGLGVSHM
GAGVGVNAQVPQMGHQQSIMSQNMGQGMSGGMGQGIGQGMVGGVGGPGNV
QGSMMGGIPGMGMGDYQLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLV
PLDVVMVIRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSK
RMDYYTAIVGHIQSQNMSGARQGGSGGMSHGGMGGSGGMGADGMMGAPAV
HTGVIRMRGLPFSATKQDVINFFQGLPVADDMIQFVVRGDGRVTGEAFVS
FGSTSDSESAMQRNGNHMGTRYVELFPSTPEEIVRHMNRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf