mRNA_H-paniculata_contig7557.15542.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.840e-74 Identity = 153/410 (37.32%), Postives = 224/410 (54.63%), Query Frame = 1
Query: 22 LQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS--------------LKPVS---TLRIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGF-SPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIA-GRREKVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVKISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
++ +A K + A + E+ +L N TWE LP G KAI K +FK K G + YKARL++ PV+ ++RI+ S+AA++ L MDV A+LN +EEE+++K GF + D V +L+++LYGLKQS WN T+D F+ IG + TD C+Y RDD + + V +YVDDL +A + + K +S+RF M DLG L LG+EV RD +G +++ Q ++ VL +G +C+ V TP + +K++ ++ YRS VG +MY G RPD+A AV ++ DPC + KR+ RYL P GI F G +G L + DA+WA D+E R+ST+GYVF LNGG I+W S+KQ+ V
Sbjct: 1 MESSDASKWKEACESEFESLCKNKTWELV---PLPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVDAKYPD--HVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTM----QGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTV 398
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU) HSP 1 Score: 259 bits (663), Expect = 1.530e-73 Identity = 166/424 (39.15%), Postives = 231/424 (54.48%), Query Frame = 1
Query: 1 PKSAAEALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS--------------LKPVSTL---RIVFSLAAEHDFELEDMDVDAAYLNAPVEEELF------VKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIAGR-REKVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVKISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLE--EFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
P + EA PE E R A++EE L DN +E+ +P+G K I K + + K +NG + YK R+++ PV+ L RI+ +LAA +D EL+ MDV AAYLN ++EEL+ V + PG RL++SLYGLKQ+G WN TLD L G+G +R +++CLY RDD G+ LV VYVDDL +A R +DE K ++ +F+M+DLG S +LGI +RRDRP I +SQR YI VL YG +C+ TP+ VK SA D + +S G S Y S++G +MYA G RPDIAY V R +P R + KR RYL D+ + F G ++ + DA+W+ D + +ST+G+VF N GAI W S++Q V
Sbjct: 983 PSTLREAFSTPEGEHWRAALEEELQNLRDNCVYETV---PIPSGVKPITSKPVLRVKFDKNGGIERYKIRIVARGFTQKPGIDYQDVFAPVANLESVRIILALAARYDLELDQMDVSAAYLNGELDEELYLMPPDGVAIEPGH---------CWRLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTL-HSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKRCHWEMAKRGLRYLKATRDMELRFDGSDVAGDMDFHGYSDADWSGDRDTSRSTSGFVFISNRGAIGWSSKRQSLV 1392
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 250 bits (639), Expect = 2.460e-73 Identity = 150/417 (35.97%), Postives = 240/417 (57.55%), Query Frame = 1
Query: 1 PKSAAEALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS--------------LKPV---STLRIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIAGRR-EKVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVK-ISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
P + +EAL GP AE+ AM++E +L ++ WE LP KA+G K +FK K +GS+ +KARL++ PV ++R V +L+ + +L MDV AA+LN +E+E+++K GF ++ +L KSLYGLKQS WN+ LD L IG ++ +D C+Y +DG +VA++VDD+ +AG+ EK+ + K +I++RF++KD+G L +LG++V ++ + + I Q Y ++K YG + C+ V TPV+ K +SA + ++ N +++S VG L+Y S+ RPDI +AV+ A+ +P + ++ KRIFRYL + G+ + +N + F DA+WA D+ DRKST+GY F++NG A+SW S+KQ V
Sbjct: 146 PTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELT---ELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSEL----------FNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCVG-FSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCV 543
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 256 bits (653), Expect = 3.250e-72 Identity = 154/415 (37.11%), Postives = 236/415 (56.87%), Query Frame = 1
Query: 1 PKSAAEALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS-----------------LKPVSTLRIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIAGRREKVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVKISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
P+S EA+Q P+ + + A+++E L D+ T++ P P +G K +F+ K NG + YKARL++ + ++++RI+ +LAA HD+++ MDV AYLNA +EEE+F+K PG + ++ +V LR ++YGLKQSG W + L +GL RS+ D C+++ +D L++A+ VDD IAG V FK IS+RF M DLG + +LGIEVRRDR T+++SQR YI ++ + ++ + + TP+E +S + PS P N YR +G LMYA+ G RPDIA+AV ++ M++P R + KR+ RYL + + +T+G NG +E F DA+W E R S GYVF ++GGA+SW ++KQ V
Sbjct: 960 PRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEP---PENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKE-HWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQC---PSTPREFEDMRN-VPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNG--VEGFSDADWGSS-EHRHSICGYVFLIDGGAVSWSAKKQPVV 1363
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 254 bits (650), Expect = 8.480e-72 Identity = 158/417 (37.89%), Postives = 228/417 (54.68%), Query Frame = 1
Query: 1 PKSAAEALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS----------------LKPVSTL---RIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIAGRREKVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVKISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
P++ EA Q P+ + + A+ E+ L + ++ P P +G K +F+ K G+V+ +KARL++ PVS L R + SLAA HD+EL MDV +AYLN +EE ++++L PGF+P + V RL+K+LYGLKQ+G W TL + +G R + D +++ R+ GE+ ++VA VDDL I G + VD F +I QRF M DLG L +LGIEVRRDR TI ISQR YI ++ + DE + P++ + +S P + YR VG LMYA+ G RPDI +AV ++ M++P R + KR+ RYL +L + +G +N GL + DA+W E R S +GYVF L+GGAISW S+KQ V
Sbjct: 1028 PRTLEEARQSPDWPQWQRAIDAEYDNLRRHDVFDLVEP---PPDANIVGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDM----RDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVV 1432
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 253 bits (647), Expect = 1.710e-71 Identity = 156/417 (37.41%), Postives = 229/417 (54.92%), Query Frame = 1
Query: 1 PKSAAEALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS--------------LKPV---STLRIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIAGRRE-KVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVE-GRVKISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
P++ EALQG A+ + +M+ E+ AL+ N TW LPAG K IG K +F+ K +NG + +K+RL++ PV T+R++F++AAE + +D+ AYLN+ ++EE++++ F V +L+K++YGLKQSG WNNTLD L +G RS ++CLY + G + +AVYVDDL I E ++ K IS +F M D G LS LG+E++RD G +++ Q+ YIR +LK YG CR V TP++ G + S K N T Y+S++G LMY + +RPDI +AV + ++R +P + + K I RYLS +L I + + G + F DA+WA D DRKS +GY F L G A SW S KQ V
Sbjct: 818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLV---DLPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNFISTEHPNK-VLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKV----------NVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIV 1216
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 247 bits (630), Expect = 2.540e-71 Identity = 151/414 (36.47%), Postives = 229/414 (55.31%), Query Frame = 1
Query: 16 EALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLI--------------SLKPV---STLRIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIAGRREKVDE-FKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVKIS---APKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
EAL PEA+ + AMKEE + N TW +LP G +AI K +FK K G++ YKARL+ + PV ++LR +F++AA+HD + +D A+LN ++EE+F+K G+S + V RL KSLYGLKQ+ WN+ L+ L+ +GL RS D C+YF + + VA+YVDD+ + +K + K+ +S + +MKD+G S VLG+ V+RD I + Q YI VLK +G D+C V TP++ K++ PKS ++ + Y VG L+YA+ RPDI++AV+ +R ++P + + KR+ RYL + GI F + + L + DA+WA D++ R+ST+GYVF + G AISW S +Q+ V
Sbjct: 238 EALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSD---NSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEYSM--VYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEK-------KEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVF--RKSAQSLTGYCDADWAGDLDQRRSTSGYVFIMQGAAISWSSHRQRTV 634
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 252 bits (644), Expect = 3.780e-71 Identity = 152/417 (36.45%), Postives = 240/417 (57.55%), Query Frame = 1
Query: 1 PKSAAEALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS--------------LKPV---STLRIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIAGRR-EKVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVK-ISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
P + +EAL GP AE+ AM++E +L ++ WE LP KA+G K +FK K +GS+ +KARL++ PV +R V +L+ + +L MDV AA+LN +E+E+++K GF ++ V +L KSLYGLKQS WN+ LD L IG ++ +D C+Y +DG +VA++VDD+ +AG+ EK+ + K +I++RF++KD+G L +LG++V ++ + + I Q Y ++K YG + C+ V TPV+ K +SA + ++ N +Y+S VG L+Y S+ RPDI +AV+ A+ +P + ++ KRIFRYL + G+ + +N + F DA+WA D+ DRKST+GY F++NG A+SW S+KQ V
Sbjct: 760 PTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELT---ELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSEL----------FNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCVG-FSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCV 1157
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 244 bits (623), Expect = 3.970e-71 Identity = 150/416 (36.06%), Postives = 233/416 (56.01%), Query Frame = 1
Query: 1 PKSAAEALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS--------------LKPVS---TLRIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLYFSRDDGGETDLLVAVYVDDLFIAGRRE-KVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVKISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFV 1194
P++ EAL P+ K AM++E +L N W LP KA+G K +F+ K +G+V +KARL++ PV+ ++R V +LAA+H +L MDV A+LN ++EE+++K GF ++ V RLR+S+ GLKQS WN+ LD L +G ++ D C+Y +++GGE ++AVYVDD+ +AG+ + K++E K ++++F+MKD+G LG++V + + I I Q Y + VL+ +G + + TPV K+ K+AD + + +Y+ VG L+Y ST RPDIAYAV AR P + + KRI RYL+ D+G+ + G + DA+WA D++DRKST+GYVF+++ AISW S+KQ V
Sbjct: 130 PRTVKEALSSPQKTKWVKAMEKEMESLKTNEVWNLV---ELPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKE-HLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLK--KAADDSQRVDQ-------VNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCV 530
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 241 bits (615), Expect = 5.440e-71 Identity = 150/425 (35.29%), Postives = 228/425 (53.65%), Query Frame = 1
Query: 1 PKSAAEALQGPEAEKCRVAMKEEWGALVDNGTWESEYPWRLPAGWKAIGRK*IFKRKLKENGSVACYKARLIS--------------LKPV---STLRIVFSLAAEHDFELEDMDVDAAYLNAPVEEELFVKLSPGFSPFFRDIP-FVRRLRKSLYGLKQSGCNWNNTLDVFLVGIGLDRSITDSCLY---FSRDDGGETDLLVAVYVDDLF-IAGRREKVDEFKHNISQRFRMKDLGYLSRVLGIEVRRDRPNGTINISQRCYIREVLKGYGFDECRGVPTPVEGRVKISAPKSADKPSKPNSRGRSGNSTDYRSMVGLLMYASTGARPDIAYAVHQAARRMEDPCRQDFSTCKRIFRYLSTVPDLGITF----GGKSNGHGLEEFVDANWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQFVT 1197
P+S +EAL G A K + A+KEE+ +L+ N TWE P P G IG K + K K +G+V +KARL++ PV S++R + +LA +H+ E+ MDV A+LN +E ++++ GF ++ P +V +L+KSLYGLKQS WN TLD FL G +S D+C+Y D+G + +++AVYVDD+ I+ ++ K + + F M D G + +LG+ ++RDR T+ ISQ+ Y+ VL +G C+ + TP+E K + Y+ +G L Y ST RPDI+ AV + M +P ++ ++ KR+ RY+ + G+ F NG L + DANWA DV+ R+ST+GYVFK+ +SWCS+KQ VT
Sbjct: 14 PQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVD--QEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYH-----------KRTEEEEGFDKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVT 422 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7557.15542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7557.15542.1 >prot_H-paniculata_contig7557.15542.1 ID=prot_H-paniculata_contig7557.15542.1|Name=mRNA_H-paniculata_contig7557.15542.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp MDVDAAYLNAPVEEELFVKLSPGFSPFFRDIPFVRRLRKSLYGLKQSGCNback to top mRNA from alignment at H-paniculata_contig7557:10046..11326+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7557.15542.1 ID=mRNA_H-paniculata_contig7557.15542.1|Name=mRNA_H-paniculata_contig7557.15542.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1281bp|location=Sequence derived from alignment at H-paniculata_contig7557:10046..11326+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7557:10046..11326+ >mRNA_H-paniculata_contig7557.15542.1 ID=mRNA_H-paniculata_contig7557.15542.1|Name=mRNA_H-paniculata_contig7557.15542.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig7557:10046..11326+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |