prot_H-paniculata_contig73409.15313.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig73409.15313.1
Unique Nameprot_H-paniculata_contig73409.15313.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A7S1T3E5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T3E5_9CHLO)

HSP 1 Score: 74.3 bits (181), Expect = 1.240e-15
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    2 LDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDE 63
            L  +RVFGC AY+     QRRKLDD+AW G+F+G   +SP++ +YNP  +    SRNV FDE
Sbjct:   30 LSSMRVFGCPAYVHVDKSQRRKLDDRAWKGVFVGYASESPAWLVYNPVTRRAVSSRNVVFDE 91          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A4Y2LAF7_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LAF7_ARAVE)

HSP 1 Score: 75.1 bits (183), Expect = 3.140e-14
Identity = 38/71 (53.52%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    2 LDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEEDFVTGHRE 72
            L H+RVFGC AY   Q Q+RRKLDDKA  G+FLG D  S  YRIY   NK + +SR V+F+E       RE
Sbjct:  170 LSHIRVFGCKAYACIQKQKRRKLDDKAVEGIFLGYDYRSKGYRIYLGDNK-IMISRTVKFNENPLPYAKRE 239          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A2P4YVT1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YVT1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.800e-13
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    2 LDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEEDFVT 68
            + H+R+FGC AY++   ++RRK D KA  G F+G +E S SYR+Y+     V +SR+V FDE  F T
Sbjct:   31 VKHMRIFGCKAYVLTPREKRRKWDPKAREGTFMGYEERSKSYRVYDIEAGKVVISRDVTFDESSFDT 97          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A371GY67_MUCPR (Uncharacterized protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371GY67_MUCPR)

HSP 1 Score: 72.4 bits (176), Expect = 2.330e-13
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0
Query:    1 KLDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEEDFVTGHRE 72
            K+DHLRVFGC AY     Q R K+DDK+   +F+G D +S  Y++YNP N  + +S++V F+EE+     +E
Sbjct:  111 KVDHLRVFGCIAYAHVPNQGRSKIDDKSVKHVFIGYDANSKGYKLYNPNNGKMIISKDVEFNEEEAWNWEKE 182          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A6A3C4D2_HIBSY (FAD-binding Berberine family protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C4D2_HIBSY)

HSP 1 Score: 72.8 bits (177), Expect = 2.690e-13
Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    2 LDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEEDF 66
            + HL++FGC AY     Q R+KLDD+    +F+G DE S +YR+YNP  K + +SR+V FDE D+
Sbjct:  507 VGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 571          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A6A3ACL1_HIBSY (Putative cyclic nucleotide-gated ion channel 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ACL1_HIBSY)

HSP 1 Score: 72.8 bits (177), Expect = 2.690e-13
Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    2 LDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEEDF 66
            + HL++FGC AY     Q R+KLDD+    +F+G DE S +YR+YNP  K + +SR+V FDE D+
Sbjct:  449 VGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 513          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY)

HSP 1 Score: 72.8 bits (177), Expect = 2.690e-13
Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    2 LDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEEDF 66
            + HL++FGC AY     Q R+KLDD+    +F+G DE S +YR+YNP  K + +SR+V FDE D+
Sbjct: 1475 VGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 1539          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A6H5FV69_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FV69_9HEMI)

HSP 1 Score: 72.4 bits (176), Expect = 3.660e-13
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 KLDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEED 65
            KL H+R+FGC A+      +RRKLD +A   +FLG   +S +YR+YNP N+ V LSR+VRF E +
Sbjct:  201 KLSHIRIFGCKAFAHVPSDRRRKLDKRATVCIFLGYSLESKAYRLYNPANRRVFLSRDVRFSESE 265          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A371HBS1_MUCPR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371HBS1_MUCPR)

HSP 1 Score: 69.3 bits (168), Expect = 4.090e-13
Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 KLDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEED 65
            K+DH +VFG  AY+    Q R KLDD++   +F+G D +S  Y++YNP N  + +SR+V FDEE+
Sbjct:   96 KVDHFKVFGSIAYVHVPNQGRSKLDDRSVKHVFIGYDANSKGYKLYNPNNGKMIVSRDVEFDEEE 160          
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Match: A0A329R541_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329R541_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.040e-12
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    2 LDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGNKSVKLSRNVRFDEEDFVTGHR 71
            + H+RVFGC  YI+   ++R K D KA AGLFLG +E S +YR+Y+     V +SR+V FDE   V+  R
Sbjct:   98 VKHIRVFGCRTYILTPKEKRLKWDPKARAGLFLGYEEVSKAYRLYDIEAGQVVISRDVTFDESSLVSQRR 167          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig73409.15313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1T3E5_9CHLO1.240e-1551.61Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A4Y2LAF7_ARAVE3.140e-1453.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A2P4YVT1_9STRA1.800e-1346.27Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A371GY67_MUCPR2.330e-1344.44Uncharacterized protein (Fragment) n=1 Tax=Mucuna ... [more]
A0A6A3C4D2_HIBSY2.690e-1347.69FAD-binding Berberine family protein n=1 Tax=Hibis... [more]
A0A6A3ACL1_HIBSY2.690e-1347.69Putative cyclic nucleotide-gated ion channel 8 n=1... [more]
A0A6A2WXP0_HIBSY2.690e-1347.69Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=10... [more]
A0A6H5FV69_9HEMI3.660e-1349.23Uncharacterized protein n=2 Tax=Nesidiocoris tenui... [more]
A0A371HBS1_MUCPR4.090e-1346.15Integrase catalytic domain-containing protein (Fra... [more]
A0A329R541_9STRA1.040e-1247.14Integrase catalytic domain-containing protein (Fra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 2..66
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig73409contigH-paniculata_contig73409:367..585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig73409.15313.1mRNA_H-paniculata_contig73409.15313.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig73409 367..585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig73409.15313.1 ID=prot_H-paniculata_contig73409.15313.1|Name=mRNA_H-paniculata_contig73409.15313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
KLDHLRVFGCTAYIIFQLQQRRKLDDKAWAGLFLGNDEDSPSYRIYNPGN
KSVKLSRNVRFDEEDFVTGHRE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like