|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1136 |
| Cds size | 900 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12399.1506.1 >prot_H-paniculata_contig12399.1506.1 ID=prot_H-paniculata_contig12399.1506.1|Name=mRNA_H-paniculata_contig12399.1506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp
MAELKGDLVVVMAQLNTLQQRELETNRKMARVEIDCGKRLSSAEGKVASL
AMENSLLWAKVDEQEAAIRRLTEQQNVHGTNASMLKTTMDLMVDENTKID
TKFEGLEARIKTNEQAVYLYGGILSDTNHALEDAHSLCKELDDKVEELGL
QQFDMAIDVCVLETRLNFPQNEKANEDMKLKYQGLEARVEKTEGTICLHE
DLLVNVEQGMEGAHSLYGGIKYNFLQMARYMNDMTNAVDTMFSMVEVGAT
KVVTNAHLLEATMAVVRALAMGNPQGGGAPGSNERRHAAYGGIVDYGRG* back to topmRNA from alignment at H-paniculata_contig12399:1353..3897+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12399.1506.1 ID=mRNA_H-paniculata_contig12399.1506.1|Name=mRNA_H-paniculata_contig12399.1506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2545bp|location=Sequence derived from alignment at H-paniculata_contig12399:1353..3897+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGACACGACCTAACACACGACCTCGAGCGACAGACAGCAAGTCGTTCGC
AGGTATGTAGTAGAGTAGATGAATCTAGCCGAGTACGATAATTCTCAGCA
AACGCATCCACAGACGATCAAACCGGAGCAGGCTAGTCTCCGCTGTGTAT
GTAATGAAGTTGAGCAGAGCCATGGCTGATTGCTGTGTTCGTAAAATGAG
TGAATACAGTATACCAGATGATGGATGTAAAAATCGTTGAGTCAGATGTC
TATCTCTCTATCCTGCTTCACCGTTCCCGAGCAGTGCCACACGCAGAACG
CCAGTACGGTACTACACGTACCTGCCTACACACGGTGGGCGAACTGTGGA
AAGAAGAGGCCGCCAGGGCCGAACATTGATAGATACAGTAGAATACAAGA
GAAGGAGACGGCCAAGGTGCCTAACGATGGAGCCATAGTGCGGGAACAGA
TGGCGGAGTTGAAGGGCGACCTGGTGGTGGTGATGGCCCAGCTGAACACG
CTACAACAGAGGGAGTTGGAGACAAATAGAAAGATGGCCAGGGTCGAAAT
AGATTGCGGCAAACGCTTATCGTCCGCGGAGGGGAAGGTGGCGAGCCTGG
CCATGGAAAACAGCTTGTTATGGGCCAAGGTTGATGAGCAGGAGGCCGCG
ATTAGAAGACTGACTGAGCAGCAAAACGTTCATGGAACGAACGCTTCCAT
GTTGAAGACCACGATGGACCTCATGGTCGATGTGAGTGCGTGTTCAAGTA
GTGTACCGTATTATACTGTAGGGCAACACGACGCAACGCTAGATATAGTT
GGATTGGTGGCAGTATCTGATGAGTTTGTCGTTGGCCACAAGAGCAATGA
TAGTAGCGTTCTCGGCACAGCCCTGTAGTCTCACAGACCTTTGGTACATC
CCATGTACACCCGTCGGCTTCTTCCTCACTCATCCCTACTCTACCCTGCC
CTACTGTACTTCCTTCGCCTGTTCCCCTATAGGAGAACACAAAAATAGAC
ACGAAGTTCGAAGGATTGGAAGCTCGCATCAAGACGAACGAGCAGGCAGT
TTATCTGTATGGGGTACGTGGGTACATTTTGTACTTTTAATATATTTATT
GTTATTTCGATATTTCTGTATCGAACGGCAATCGCGCTGTCGGTCTGAAG
GTATCCAGCGCTTGCAAATGTGTATTGTTCGTGCGCTCATACTCCCCTCA
AGAGTAGTGCAGTATCTCGATTTCTCCCCTCCGTTGTTAACGAGCGAAAC
TAGAGACTAGAGAGAGACTAGTTGGTATTTTTAGCTACAGTAGTACGGTG
AAGTAAATATATTTCGATTGCTGCGCTCCTTCCGTGTCTGTCGGTTGACT
TGCTGTCGGCGTTGTCTCGTGTTTTGCTGTTTCGCCATGACTGCAGGGAA
TCCTCTCTGATACGAACCACGCGTTGGAAGACGCTCACTCGCTCTGCAAA
GAGCTAGACGACAAGGTGGAGGAGCTGGGTTTACAGCAATTTGACATGGC
AATAGATGTTTGCGTGTTGGAGACCCGCCTGAATTTCCCCCAGAATGTGA
GTGTGTATTCAAGTGCTGTACTGTAGTATACTTGACTATACTATGCTGTA
GAGCGACGCGACGCGAGTCTAGAGTACAGTTGGGTTGGCTGCAGTGTTAG
GTCCGGTTGTCGTTGACTACACTGCTAATAGTACAGCTCTCGGAACAGGA
TTGCATCATGCCGCATTTTTCGGTATACCCGTTATTCTTTCTTCCTTCCC
CTACCTTACTGTACTGCACTGCACTGCACTGTACTACACTGCACTGTACT
GTACTGTACTATACTCTCTTCTCTTGCTCCCCTATACATAGGAGAAGGCG
AACGAAGACATGAAGCTGAAGTACCAAGGATTGGAGGCTCGAGTCGAGAA
AACCGAGGGTACCATATGTCTGCACGAGGTACGTGGGTAGACTTTGGTGT
TTCTGTAACGAGCAGCAACCATGCTGTCCATCTGGAGGTATCCAGTGCTT
GCTACAGTATTGTTTGTGCGCTCATACTTCTGCCAGCAGTAGAGCATAGA
CCACAGTTATCTAGGATTTTTCCCTCCGTTGGTACCGAGCAGAAGTAGGT
AATTATTTTTAACATACGGTGAAGGTATATTTTCGTCCTCCTATTGTTGC
CTACCTTCCTTCTTTGCTTTTTCGTTGAATTGCTGTCCGCGTTGTCTCAC
GTATTTCTTCCTGTCCATGACTGCAGGATTTATTGGTCAACGTGGAGCAG
GGTATGGAGGGCGCCCACTCGCTCTACGGCGGCATCAAGTACAACTTCTT
GCAAATGGCTAGGTACATGAACGACATGACCAATGCCGTGGACACGATGT
TCAGCATGGTGGAGGTGGGCGCCACGAAGGTGGTGACGAACGCCCACCTG
CTGGAGGCGACGATGGCAGTGGTACGGGCGTTGGCCATGGGCAACCCTCA
GGGGGGTGGGGCACCCGGATCTAACGAGCGGCGGCACGCGGCATACGGTG
GAATCGTCGACTACGGGAGAGGCTGATGGCAACGTTGCCGTGTAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig12399:1353..3897+ >mRNA_H-paniculata_contig12399.1506.1 ID=mRNA_H-paniculata_contig12399.1506.1|Name=mRNA_H-paniculata_contig12399.1506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at H-paniculata_contig12399:1353..3897+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGAGTTGAAGGGCGACCTGGTGGTGGTGATGGCCCAGCTGAACAC
GCTACAACAGAGGGAGTTGGAGACAAATAGAAAGATGGCCAGGGTCGAAA
TAGATTGCGGCAAACGCTTATCGTCCGCGGAGGGGAAGGTGGCGAGCCTG
GCCATGGAAAACAGCTTGTTATGGGCCAAGGTTGATGAGCAGGAGGCCGC
GATTAGAAGACTGACTGAGCAGCAAAACGTTCATGGAACGAACGCTTCCA
TGTTGAAGACCACGATGGACCTCATGGTCGATATGGCGGAGTTGAAGGGC
GACCTGGTGGTGGTGATGGCCCAGCTGAACACGCTACAACAGAGGGAGTT
GGAGACAAATAGAAAGATGGCCAGGGTCGAAATAGATTGCGGCAAACGCT
TATCGTCCGCGGAGGGGAAGGTGGCGAGCCTGGCCATGGAAAACAGCTTG
TTATGGGCCAAGGTTGATGAGCAGGAGGCCGCGATTAGAAGACTGACTGA
GCAGCAAAACGTTCATGGAACGAACGCTTCCATGTTGAAGACCACGATGG
ACCTCATGGTCGATGAGAACACAAAAATAGACACGAAGTTCGAAGGATTG
GAAGCTCGCATCAAGACGAACGAGCAGGCAGTTTATCTGTATGGGGAGAA
CACAAAAATAGACACGAAGTTCGAAGGATTGGAAGCTCGCATCAAGACGA
ACGAGCAGGCAGTTTATCTGTATGGGGGAATCCTCTCTGATACGAACCAC
GCGTTGGAAGACGCTCACTCGCTCTGCAAAGAGCTAGACGACAAGGTGGA
GGAGCTGGGTTTACAGCAATTTGACATGGCAATAGATGTTTGCGTGTTGG
AGACCCGCCTGAATTTCCCCCAGAATGGAATCCTCTCTGATACGAACCAC
GCGTTGGAAGACGCTCACTCGCTCTGCAAAGAGCTAGACGACAAGGTGGA
GGAGCTGGGTTTACAGCAATTTGACATGGCAATAGATGTTTGCGTGTTGG
AGACCCGCCTGAATTTCCCCCAGAATGAGAAGGCGAACGAAGACATGAAG
CTGAAGTACCAAGGATTGGAGGCTCGAGTCGAGAAAACCGAGGGTACCAT
ATGTCTGCACGAGGAGAAGGCGAACGAAGACATGAAGCTGAAGTACCAAG
GATTGGAGGCTCGAGTCGAGAAAACCGAGGGTACCATATGTCTGCACGAG
GATTTATTGGTCAACGTGGAGCAGGGTATGGAGGGCGCCCACTCGCTCTA
CGGCGGCATCAAGTACAACTTCTTGCAAATGGCTAGGTACATGAACGACA
TGACCAATGCCGTGGACACGATGTTCAGCATGGTGGAGGTGGGCGCCACG
AAGGTGGTGACGAACGCCCACCTGCTGGAGGCGACGATGGCAGTGGTACG
GGCGTTGGCCATGGGCAACCCTCAGGGGGGTGGGGCACCCGGATCTAACG
AGCGGCGGCACGCGGCATACGGTGGAATCGTCGACTACGGGAGAGGCTGA
GATTTATTGGTCAACGTGGAGCAGGGTATGGAGGGCGCCCACTCGCTCTA
CGGCGGCATCAAGTACAACTTCTTGCAAATGGCTAGGTACATGAACGACA
TGACCAATGCCGTGGACACGATGTTCAGCATGGTGGAGGTGGGCGCCACG
AAGGTGGTGACGAACGCCCACCTGCTGGAGGCGACGATGGCAGTGGTACG
GGCGTTGGCCATGGGCAACCCTCAGGGGGGTGGGGCACCCGGATCTAACG
AGCGGCGGCACGCGGCATACGGTGGAATCGTCGACTACGGGAGAGGCTGA back to top
|