prot_H-paniculata_contig6983.14925.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6983.14925.1
Unique Nameprot_H-paniculata_contig6983.14925.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length818
Homology
BLAST of mRNA_H-paniculata_contig6983.14925.1 vs. uniprot
Match: D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 4.540e-35
Identity = 192/661 (29.05%), Postives = 255/661 (38.58%), Query Frame = 0
Query:    1 MTVDGSLVRVKAFLNDGRLAPGMMHVVGLRAPDRGVAEARFKARLAPSATSWTMGEARDRGSQNDRGVRLAMELVHGEEFGVAEEANEVIRR----------LSAKRVSSLDEALEGIAYESWRRAAAAV-------------TAATVATPP--SDTPLISS-------------IMGRKRGSRVQQASQAKEHQNSNRI-----------PAGK-----VNVVSDTPDTLSQQSTGENGGSVSAIEQRPGFV--VDDYLPLDPTDYLPEEGSQSTTTRGEDRARSTVGSRHRGNTVSHAAVVDGNNDGXXXXXXXDYVVLSPMTPLEQ----------------------------------------------------------LLRLMNVLADGGKVTVADAVAGFGGDAARLGRLLELGVLRLRPRTVCA--------KSTADGGFGAGVTGGL---LHGTGYGT------RLLGLSAVLPEADVTFEVGPATPIVEGVFAILRGCKGFEEQALVRSTAFMS--GTYGVSG---------------------RTEELRQPREAFMTTLLERAFAVDSDGEKGVEGEPV----------------------------GLNGLSTRRLQSAMAAAGCMLTRLEIEYEIHAAESQEGEL 479
            + VDGSLVRVK FLNDGRLAPGMM V+ L APD  V E RF++R A +    T G A   G + +R V L MELVH E   VA+EANE++ R          LSA R++ L+E+L+G A E+WRR  AAV             T A V TP   S   L S+               G     R  Q  +A+      R            PAG      V   +   D  +  + G   G   A  + PG        +P D      +  +++  TR E + +    S         AA +  +              LSP    E+                                                          L+ L+  LADGGKV+V  AVA   GD   L RLL+LGVLRL P+T  +        +ST   G  A +   L   L G+          R    + VL EA   F+VG ATP++ GVF+IL+GC+G EEQA+  +  F+S  G    +                       +EE +  REA M  L+ RA    +                                         +   TRRLQ+A+AA GCM T +EI  E+ AA+S  G L
Sbjct:  197 LAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFAAAPQQPTQGGA---GEEGERAVTLCMELVHREGCSVADEANEILTRTDFSDDSPDKLSAARLA-LEESLDGFALEAWRRVGAAVESTAAIAPRGFAGTDAVVGTPGAVSSAALASNQRAPVPPSTSAGGSSGATSAKRNTQEGRAESGVTRTRTSXXXXXXXXXXPAGGGEEGGVQTANHDVDDGAAVAAGAGPGDDKAESEVPGLSSPAAAVVPKDGKRGHADSSAEAEATREELQQQKQQESLQDEGKEPPAADITPDEPASLEASELSSF-LSPRARGEEEAVYWEEAESLSAPVVAEEPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRLVELLGELADGGKVSVHHAVAALDGDGKALARLLDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTASILSSLSLSLPGSSLDASHSRPGRGSTSADVLAEAGAAFQVGAATPLMAGVFSILKGCQGVEEQAIAGAIHFLSRGGNENAAXXXXXXXXXXXXXXXXXXXFEEESEEWQAHREASMAMLVHRAMTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSRRSSTSAYRTRRLQTALAAVGCMTTWMEIFKELSAADSPGGML 852          
BLAST of mRNA_H-paniculata_contig6983.14925.1 vs. uniprot
Match: A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 8.030e-35
Identity = 171/518 (33.01%), Postives = 221/518 (42.66%), Query Frame = 0
Query:    1 MTVDGSLVRVKAFLNDGRLAPGMMHVVGLRAPDRGVAEARFKARLAPSATSWTMGEARDRGSQNDRGVRLAMELVHGEEFGVAEEANEVIRR----------LSAKRVSSLDEALEGIAYESWRRAAAAV-------------TAATVATPP--SDTPLISSIMG-----RKRGSRVQQASQAKEHQNSNRIPAGKV-----------------------------------------------NVVSDTPDTLSQQST-----GENGGSVSAIE----------------QRPGF-------VVDDYLPLDPTDYLPEEGSQSTTTRGEDRARSTVGSRHRGNTVSHAAVVDGNNDGXXXXXXXDYVVLSPMTPLEQLLRLMNVLADGGKVTVADAVAGFGGDAARLGRLLELGVLRLRPRT----VCAKSTADGGFGAGVTGGLLHGTGYGTRLLGLSA-------------VLPEADVTFEVGPATPIVEGVFAILRGCKGFEEQALVRSTAFMS 396
            + VDGSLVRVK FLNDGRLAPGMM V+ L APD  V E RF++R   +    + G     G + +R V L MELVH E   VAEEANE++ R          LSA R++ L+E+LEG A E+WRR  AAV              AA V TP   S   L S+           G R   A+ AK +    R  +G                                                    S+ P   S  +      G++G + S++E                QR G          D+   L+ T+  P  G    T   E +A S         + S  +        XXXXXXX      P TP+ +L+ L+  LADGGKV+V  AVA   GD   L RLL+LGVLRL P+T    V A         AG T  +L        +  L A             VL EA   F+VG ATP++ GVF+IL+GC+G EEQA+  +  F+S
Sbjct:  211 LAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFVVAPQQRSQGGG---GEEGERAVTLCMELVHREGCAVAEEANEILTRTDFSDDSPSKLSAARLA-LEESLEGFALEAWRRVGAAVESTAAIAPRGFAGAAAVVGTPGAVSSAALASNQRAPVPPSMSTGGRTG-ATYAKRNTQEGRAESGATWTRTSPGSGSEGDGDPAGGGEEGGVQSANHGFDDGAAVAAGAGPGDDKAESEVPGLSSPAAAVGPNDGKSGHADSSVEVEATPQELQQKQQESLQREGKEPPAADDTADEPAILEATELSPSSGGGEGTVYSE-KAESLSAPVVAEESSSSYSAXXXXXXXXXXXXXXXXNPGDPATPVGRLVELLGELADGGKVSVHHAVAALDGDGKALARLLDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTSSILSSLALSLPVSSLDASHSHPRTGSTSPDVLAEAGAAFQVGAATPLMAGVFSILKGCQGAEEQAIACAIHFLS 722          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6983.14925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G086_ECTSI4.540e-3529.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKL7_9PHAE8.030e-3533.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6983contigH-paniculata_contig6983:2408..8898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6983.14925.1mRNA_H-paniculata_contig6983.14925.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6983 624..10223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6983.14925.1 ID=prot_H-paniculata_contig6983.14925.1|Name=mRNA_H-paniculata_contig6983.14925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=818bp
MTVDGSLVRVKAFLNDGRLAPGMMHVVGLRAPDRGVAEARFKARLAPSAT
SWTMGEARDRGSQNDRGVRLAMELVHGEEFGVAEEANEVIRRLSAKRVSS
LDEALEGIAYESWRRAAAAVTAATVATPPSDTPLISSIMGRKRGSRVQQA
SQAKEHQNSNRIPAGKVNVVSDTPDTLSQQSTGENGGSVSAIEQRPGFVV
DDYLPLDPTDYLPEEGSQSTTTRGEDRARSTVGSRHRGNTVSHAAVVDGN
NDGDGDSDDDDYVVLSPMTPLEQLLRLMNVLADGGKVTVADAVAGFGGDA
ARLGRLLELGVLRLRPRTVCAKSTADGGFGAGVTGGLLHGTGYGTRLLGL
SAVLPEADVTFEVGPATPIVEGVFAILRGCKGFEEQALVRSTAFMSGTYG
VSGRTEELRQPREAFMTTLLERAFAVDSDGEKGVEGEPVGLNGLSTRRLQ
SAMAAAGCMLTRLEIEYEIHAAESQEGELKPSTLVRRLFELSRVINTGAI
AGEDIRQGDEAEVDPIRAEVVTDTKGAVGVALARKASISNPSSAAARLPA
LDSTAIGEIHGIDDEDTRLDIHEKLLRDSSSSSATVTLTDNVEVEAGPTS
DHVTGPPSDTATGVEHRRPDEVPDTARLETFRQGLRVATEDTSALNNPSP
VASAESTSAAEIGSFVSANARLSSQTSQSPALHASNGHDGDFDAQEEREA
PTEDKNENLMDSKGKSPFSSGDAEGQAGEDNTLVMELGDDEQIEVSTISS
GDNGDSDGNDSRGAEEPLPGDGGNESETSSSKGTRQATEKATGGPPKKGW
SWGWSVPTWGVGGGKNE*
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