mRNA_H-paniculata_contig12368.1490.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: D8LN44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN44_ECTSI) HSP 1 Score: 172 bits (436), Expect = 7.080e-48 Identity = 100/180 (55.56%), Postives = 116/180 (64.44%), Query Frame = 1 Query: 1 LLPFQRRASVGDQ---RSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVGKVVSTSEDDYEEG-------------GGGDDGSRDXXXXXXGRQRETSHMWVCTFSGPRQQQKAFFWESLTGQRFCMRQPGHLLSNKGGRRTGGKAVVPVRAHHFSTVACMFSHREFFANKQ 492 LLPF+ R++VG+Q ++WNSPHAFL+AG GD +DHALLLCSLLLGFGLDALVC G +V S+DD +G GG DG+R ET HMWVCTFSG R +KA FWESLTGQRF M P S +G R T GK V R HFS V+CMF+HREF ANKQ Sbjct: 286 LLPFRPRSTVGEQPPATQRAWNSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCG-LVHPSDDDNGDGDASGAEPGGVGVRGGDSDGNRG---------EETGHMWVCTFSGSRADKKAVFWESLTGQRFAMSAPRPRPS-RGRRTTPGKMAVTPR--HFSKVSCMFNHREFLANKQ 452
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: K3XAA1_GLOUD (CEP76-C2 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAA1_GLOUD) HSP 1 Score: 100 bits (249), Expect = 1.460e-21 Identity = 62/175 (35.43%), Postives = 87/175 (49.71%), Query Frame = 1 Query: 1 LLPFQRRASVGDQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVGKVVSTSEDDY----------EEGGGGDDGSRDXXXXXXGRQRETSHMWVCTF-SGPRQQQKAFFWESLTGQRFCMRQPGHLLSNKGGRRTGGKAVVPVRAHHFSTVACMFSHREFFANKQ 492 LLP++ VG R +W S AFLS G+GD DHALLL SLLLG GLDA VC+G + + + + + G G +G+ E H+WV T + P+ FWES+TG+R+ + KGG + H + + C+FSHR+F+AN Q Sbjct: 445 LLPYESTPVVGGTRDDTWRSISAFLSVGKGDAQDHALLLASLLLGCGLDAYVCIGTIAADVQKSHLREAKQRPSSDRRGFGSEGAA-----------EIGHVWVLTRGTNPQDPSTILFWESVTGERY-------KVLEKGGHQQ----------HGYCAIDCVFSHRQFYANLQ 591
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: A0A7R9UA61_9STRA (Centrosomal protein of 76 kDa (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA61_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.790e-19 Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 1 Query: 1 LLPFQRRASVG-DQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVGKV----VSTSEDDYEEGGGGDDGSRDXXXXXXGRQRETSHMWVCTFSGPRQQ--QKAFFWESLTGQRFCMRQPGHLLSNKGGRRTGGKAVVPVRAHHFSTVACMFSHREFFANKQ 492 L+PF+R VG +R ++W++ AFLS G GD DHA+LLCSLLLGFGLDA V +G + V T+E++ + DD +RD H WV TF+ K FWESLTGQR+ + G K R+H + +V C+F+ FF NKQ Sbjct: 315 LIPFERSYGVGVRKRHETWHNACAFLSRGAGDVEDHAVLLCSLLLGFGLDAYVVLGTIRGDRVLTAENETAKQI--DDQARD-------------HAWVVTFARTADSVGMKVSFWESLTGQRYEL---------------GSKH----RSHPYVSVGCVFNDAAFFGNKQ 451
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: A0A2R5GMW5_9STRA (Centrosomal protein of 76 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMW5_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.720e-19 Identity = 50/119 (42.02%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 1 LLPFQRRASVGDQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVGKVVSTSEDDYEEGGGGDDGSRDXXXXXXGRQRETSHMWVCTFSGPRQQQKAFFWESLTGQRFCM 357 L+P+ R VG R + W+ H FLS GRGDC DHA+LLC+LLLGFGL+A VC+G V + E+ E H+W T SG + + FWESLTG R M Sbjct: 360 LIPYTREEMVGGSRLEVWHVAHTFLSKGRGDCEDHAVLLCNLLLGFGLNAFVCMGTVQDSPEEP-----------------------ERDHVWCMTLSG-KDNRTCTFWESLTGHRVVM 454
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: A0A7S1TR63_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR63_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.780e-19 Identity = 70/172 (40.70%), Postives = 85/172 (49.42%), Query Frame = 1 Query: 1 LLPFQRRASVGDQ-RSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVG-----KVVSTSEDDYEEGGGGDDGSRDXXXXXXGRQRETSHMWVCTFSGPRQQQ--KAFFWESLTGQRFCMRQPGHLLSNKGGRRTGGKAVVPVRAHHFSTVACMFSHREFFANKQ 492 LLPF+R VG + R ++W+SP AFL+ GD DHA+LLCSLLLGFGLDA V VG KV+S E G + RD H WV TFS K FWESLTGQR+ + G K R+H + +V +FS F ANKQ Sbjct: 146 LLPFERAFGVGLRARQETWHSPAAFLARRAGDVEDHAVLLCSLLLGFGLDAYVAVGTIRGDKVISAEN---ETTGAEPEDVRD-------------HAWVVTFSRTADGVGLKVSFWESLTGQRYTL---------------GSK----TRSHPYVSVGSVFSDTSFHANKQ 282
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: A0A7S2S781_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S781_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 3.860e-17 Identity = 51/115 (44.35%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 1 LLPFQRRASVGDQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVGKVVSTSEDDYEEGGGGDDGSRDXXXXXXGRQRETSHMWVCTFSGPRQQQKAFFWESLTGQ 345 LLP+ SVG R + W++ H+ L +GD DHALLLCS LLGFGLDA VC+G + DD E GG E H+WV + SG +Q FWESLTGQ Sbjct: 402 LLPYIHEESVGGGRLEIWHTVHSILCRRQGDVEDHALLLCSFLLGFGLDAYVCIGLI-----DDDENPGG-----------------EKEHVWVVSLSGKANRQ-VLFWESLTGQ 493
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: A0A7S2JPT5_9EUKA (Centrosomal protein of 76 kDa n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JPT5_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 5.340e-15 Identity = 46/117 (39.32%), Postives = 58/117 (49.57%), Query Frame = 1 Query: 1 LLPFQRRASVGDQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVGKVVSTSEDDYEEGGGGDDGSRDXXXXXXGRQRETSHMWVCTFSGPRQQQKAFFWESLTGQRF 351 LL + R ++G R++ W+S H FLS +GDC DHA LLCSLLLGFGLDA VCVG S + H+W T +G + FWES TG R+ Sbjct: 376 LLAYVREETIGGGRAEVWSSAHTFLSKQQGDCEDHATLLCSLLLGFGLDAYVCVGSTESNA-----------------------------HVWCMTRTGSGFD-RVIFWESTTGVRY 462
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: J9J1Q5_9SPIT (Centrosomal protein of 76 kDa n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J1Q5_9SPIT) HSP 1 Score: 79.0 bits (193), Expect = 4.590e-14 Identity = 48/124 (38.71%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 1 LLPFQRRASVGDQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVGKVVSTSEDDYEEGGGGDDGSRDXXXXXXGRQRETSHMWVCTFS--GPRQQQKAFFWESLTGQRFCMRQP 366 L+PFQR + G + + W+S +FLS G GD DHA+LLC+LLLGFGL+A VC+G E SH WV T S ++K FWESLTGQ+ P Sbjct: 341 LIPFQRLEAPGKDKVEVWHSMQSFLSRGCGDSEDHAVLLCNLLLGFGLEAYVCIGT-----------------------------NSEGSHAWVLTKSLIEASGKKKVQFWESLTGQKLEFDDP 435
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: A0A078ARW6_STYLE (Centrosomal protein of 76 kDa n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078ARW6_STYLE) HSP 1 Score: 79.0 bits (193), Expect = 4.590e-14 Identity = 47/124 (37.90%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 1 LLPFQRRASVGDQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVGKVVSTSEDDYEEGGGGDDGSRDXXXXXXGRQRETSHMWVCTFS--GPRQQQKAFFWESLTGQRFCMRQP 366 L+PFQR + G + + W+S +FLS G GD DHA+LLC+LLLGFGL+A +C+G E SH WV T S ++K FWESLTGQ+ P Sbjct: 343 LIPFQRLEAPGKDKVEVWHSIQSFLSRGCGDSEDHAVLLCNLLLGFGLEAYICIGT-----------------------------NSEGSHAWVLTKSLVEASGKKKVQFWESLTGQKLEFEDP 437
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Match: A0A8J5XJ55_DIALT (CEP76-C2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJ55_DIALT) HSP 1 Score: 77.8 bits (190), Expect = 1.160e-13 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 1 Query: 1 LLPFQRRASVGDQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDALVCVG 165 LLPF R A+VGD +++W + H+FL+ G+GD +HALLLCSLLLGFGLDA V VG Sbjct: 356 LLPFARHATVGDGSAETWGTLHSFLARGKGDADEHALLLCSLLLGFGLDAYVAVG 410 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12368.1490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12368.1490.1 >prot_H-paniculata_contig12368.1490.1 ID=prot_H-paniculata_contig12368.1490.1|Name=mRNA_H-paniculata_contig12368.1490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp LLPFQRRASVGDQRSQSWNSPHAFLSAGRGDCADHALLLCSLLLGFGLDAback to top mRNA from alignment at H-paniculata_contig12368:1359..5138+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12368.1490.1 ID=mRNA_H-paniculata_contig12368.1490.1|Name=mRNA_H-paniculata_contig12368.1490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3780bp|location=Sequence derived from alignment at H-paniculata_contig12368:1359..5138+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12368:1359..5138+ >mRNA_H-paniculata_contig12368.1490.1 ID=mRNA_H-paniculata_contig12368.1490.1|Name=mRNA_H-paniculata_contig12368.1490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig12368:1359..5138+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |