prot_H-paniculata_contig68740.14791.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig68740.14791.1
Unique Nameprot_H-paniculata_contig68740.14791.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A1I9LVG2_9PHAE (30S ribosomal protein S7, chloroplastic n=37 Tax=Phaeophyceae TaxID=2870 RepID=A0A1I9LVG2_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 4.320e-95
Identity = 148/157 (94.27%), Postives = 152/157 (96.82%), Query Frame = 0
Query:    1 MSRRTNKK-RKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFRS 156
            MSRRTNKK RKFP ADAVYDSFLVNLMISKI KSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKA+KNVSP VKIK+KRVGGSTYQVPIEVKKFRGINLGLCWIIQFA+ARSGKTIAIKLANEIIDASKG GNSIR+RDETHRMARSNKAFAHFRS
Sbjct:    1 MSRRTNKKKRKFPIADAVYDSFLVNLMISKIFKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAIKNVSPVVKIKSKRVGGSTYQVPIEVKKFRGINLGLCWIIQFAKARSGKTIAIKLANEIIDASKGLGNSIRRRDETHRMARSNKAFAHFRS 157          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A8F0FAS8_9PHAE (Ribosomal protein S7 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAS8_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 2.410e-94
Identity = 143/156 (91.67%), Postives = 152/156 (97.44%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFRS 156
            MSRRTNKKRKFP AD VY+SFLVNLMISKILKSGKKT+AQKIIY+AFDII+Q+TN+QPLKIFEKA+KNVSPAVKIKAKRVGGSTYQVPIEVKKFR INLGLCWIIQFAR RSGKTIAIKLANEIIDASKGSGNSIRK+DETHRMAR+NKAFAHFRS
Sbjct:    1 MSRRTNKKRKFPLADPVYNSFLVNLMISKILKSGKKTIAQKIIYDAFDIIEQKTNNQPLKIFEKAIKNVSPAVKIKAKRVGGSTYQVPIEVKKFRAINLGLCWIIQFARTRSGKTIAIKLANEIIDASKGSGNSIRKKDETHRMARANKAFAHFRS 156          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A8F0F786_9PHAE (Ribosomal protein S7 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F786_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 5.690e-93
Identity = 140/156 (89.74%), Postives = 153/156 (98.08%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFRS 156
            MSRRTNKKRKFP +D VY+SFLVNLM+SK+LKSGKKT+AQKIIYEAFDIIKQ+T+S+PLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWII+FARARSGKTIAIKLANEII+ASKG GN+IRK++ETHRMARSNKAFAHFRS
Sbjct:    1 MSRRTNKKRKFPKSDPVYNSFLVNLMMSKVLKSGKKTIAQKIIYEAFDIIKQKTDSEPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIKFARARSGKTIAIKLANEIIEASKGVGNAIRKKEETHRMARSNKAFAHFRS 156          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A6B9TP16_SARFS (30S ribosomal protein S7, chloroplastic n=17 Tax=Fucales TaxID=3009 RepID=A0A6B9TP16_SARFS)

HSP 1 Score: 264 bits (674), Expect = 1.500e-88
Identity = 135/156 (86.54%), Postives = 148/156 (94.87%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFRS 156
            MSRRTNKKRKFPN D VY+SFLV+LMISKILK+GKKT A+KI+YEAFDIIKQ+T++QPLKIFE A+KNVSP VKIKAKR+GGSTYQVPIEVKKFRGINLGL WI+QFA+ARSGKTIAIKLANEIIDASKG GN+IRKR ETHRMARSNKAFAHFRS
Sbjct:    1 MSRRTNKKRKFPNEDPVYNSFLVSLMISKILKNGKKTTAEKILYEAFDIIKQKTDTQPLKIFEIAIKNVSPTVKIKAKRIGGSTYQVPIEVKKFRGINLGLSWILQFAKARSGKTIAIKLANEIIDASKGYGNAIRKRHETHRMARSNKAFAHFRS 156          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A2I4Q2J7_9PHAE (30S ribosomal protein S7, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2J7_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 6.240e-81
Identity = 124/155 (80.00%), Postives = 142/155 (91.61%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFR 155
            MSRR NKKRKFP AD +YDS+LVNLMI KILKSGKK VAQ I+YE+F IIK++T + PLKIFEKA+KNVSP+VKI+AKRVGGSTYQVP EVKKFRGINLGL WI+++A+ RSGKTIAIKLANEI++ASKG GNSIRK++ETHRMARSNKAFAHFR
Sbjct:    1 MSRRINKKRKFPIADPLYDSYLVNLMILKILKSGKKRVAQNILYESFTIIKRKTKTHPLKIFEKAIKNVSPSVKIQAKRVGGSTYQVPSEVKKFRGINLGLSWILKYAKTRSGKTIAIKLANEIVEASKGFGNSIRKKEETHRMARSNKAFAHFR 155          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A6P0NIV5_9CYAN (30S ribosomal protein S7 n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NIV5_9CYAN)

HSP 1 Score: 237 bits (605), Expect = 4.900e-78
Identity = 119/155 (76.77%), Postives = 139/155 (89.68%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFR 155
            MSRR N+KRKFP AD +YDS+LVNL++ KILK+GKK +AQ IIYE F IIK +T + PLK FEKAVKNVSP+VKI++KRVGGSTYQVP EVKKFRGINLGL WI+++AR RSGKT+AIKLANEI++ASKG GNSIRK++ETHRMARSNKAFAHFR
Sbjct:    1 MSRRINRKRKFPIADPLYDSYLVNLIVLKILKNGKKRIAQSIIYETFSIIKSKTKNNPLKTFEKAVKNVSPSVKIQSKRVGGSTYQVPSEVKKFRGINLGLSWILKYARTRSGKTMAIKLANEILEASKGFGNSIRKKEETHRMARSNKAFAHFR 155          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A8E5XRR3_9PHAE (30S ribosomal protein S7, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRR3_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 1.930e-77
Identity = 115/155 (74.19%), Postives = 142/155 (91.61%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFR 155
            MSRR N +R+FP AD +Y+S LVNLMI KILK GKKT AQKIIYE+F+I+KQ+T+ +PLKIFEKAVKNV+P VKIK+KRVGGST+QVP+E+KKFR INLGLCWII+FAR RSGKTIAIKLA+EI+DASKGSG++I+K+++THRMA +N+AFAH+R
Sbjct:    1 MSRRINTRRRFPTADPIYNSLLVNLMILKILKRGKKTTAQKIIYESFNILKQKTDDEPLKIFEKAVKNVTPTVKIKSKRVGGSTFQVPVELKKFRAINLGLCWIIKFARDRSGKTIAIKLAHEILDASKGSGSAIKKKEDTHRMAEANRAFAHYR 155          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A7S6UA20_9STRA (30S ribosomal protein S7, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA20_9STRA)

HSP 1 Score: 234 bits (598), Expect = 5.710e-77
Identity = 119/156 (76.28%), Postives = 140/156 (89.74%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFRS 156
            MSRR+NKKR+FP  D VY+SFLV+L  SKILK+GKKT+A +II E F II+QRT+ +PLKIFE+AVKNV P++++KAKRVGGSTYQVP EV KF+GINL LCWII+FAR RSG TIAIKLANEII+ASKGSGNSIRK++ETHRMA+SNKAFAHFRS
Sbjct:    1 MSRRSNKKREFPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFRS 156          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: A0A8E5BF30_9PHAE (Ribosomal protein S7 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BF30_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 6.410e-67
Identity = 107/153 (69.93%), Postives = 132/153 (86.27%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAH 153
            MSRRT  KR FP AD+VY+S LV+LMISKILK+GKK  A+KIIYEAF+II+++T   PL+IFEKA+K VSP+V+IK+KR   ST QVP E++ FRGINL LCWIIQFA+ R G+T+AIKLANEIIDAS+GSGNSIRK++ETHRMA++NK FA+
Sbjct:    1 MSRRTKIKRNFPLADSVYNSVLVSLMISKILKNGKKIRAEKIIYEAFEIIEKKTKVSPLRIFEKAIKRVSPSVQIKSKRNSNSTLQVPKEIRFFRGINLSLCWIIQFAKVRPGRTMAIKLANEIIDASRGSGNSIRKKEETHRMAKANKVFAY 153          
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Match: F3Y7C8_FISSO (30S ribosomal protein S7, chloroplastic n=2 Tax=Fistulifera TaxID=880756 RepID=F3Y7C8_FISSO)

HSP 1 Score: 204 bits (520), Expect = 4.300e-65
Identity = 98/155 (63.23%), Postives = 128/155 (82.58%), Query Frame = 0
Query:    1 MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDIIKQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLGLCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKAFAHFR 155
            MSRR   K++FP  D VY S+LV+L+ ++ILKSGKKT+A+KI+Y+AFDII+++TN  PL +FEKA++N SP V++KA+RVGGSTYQVPIEV  FR  NL L WIIQF+  R G+++AIKLANEIID +   GN+I+K++ETHRMA +NKAFAHFR
Sbjct:    1 MSRRNISKKRFPQPDPVYSSYLVSLLTTRILKSGKKTIARKIVYQAFDIIRKKTNEDPLSVFEKAIRNASPIVEVKARRVGGSTYQVPIEVSSFRATNLSLRWIIQFSNKRVGRSMAIKLANEIIDTANDIGNTIKKKEETHRMAEANKAFAHFR 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig68740.14791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1I9LVG2_9PHAE4.320e-9594.2730S ribosomal protein S7, chloroplastic n=37 Tax=P... [more]
A0A8F0FAS8_9PHAE2.410e-9491.67Ribosomal protein S7 n=1 Tax=Desmarestia aculeata ... [more]
A0A8F0F786_9PHAE5.690e-9389.74Ribosomal protein S7 n=1 Tax=Protohalopteris sp. T... [more]
A0A6B9TP16_SARFS1.500e-8886.5430S ribosomal protein S7, chloroplastic n=17 Tax=F... [more]
A0A2I4Q2J7_9PHAE6.240e-8180.0030S ribosomal protein S7, chloroplastic n=1 Tax=Di... [more]
A0A6P0NIV5_9CYAN4.900e-7876.7730S ribosomal protein S7 n=1 Tax=Moorena sp. SIO3C... [more]
A0A8E5XRR3_9PHAE1.930e-7774.1930S ribosomal protein S7, chloroplastic n=1 Tax=Is... [more]
A0A7S6UA20_9STRA5.710e-7776.2830S ribosomal protein S7, chloroplastic n=1 Tax=Sc... [more]
A0A8E5BF30_9PHAE6.410e-6769.93Ribosomal protein S7 n=1 Tax=Phaeophyceae sp. TaxI... [more]
F3Y7C8_FISSO4.300e-6563.2330S ribosomal protein S7, chloroplastic n=2 Tax=Fi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 3..156
e-value: 5.2E-51
score: 169.8
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 13..155
IPR005717Ribosomal protein S7, bacterial/organellar-typeTIGRFAMTIGR01029TIGR01029coord: 3..155
e-value: 2.8E-56
score: 187.7
IPR005717Ribosomal protein S7, bacterial/organellar-typeHAMAPMF_00480_BRibosomal_S7_Bcoord: 1..156
score: 31.418
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 1..149
e-value: 2.6E-53
score: 179.7
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10coord: 2..155
e-value: 4.1E-54
score: 184.5
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 7..149
NoneNo IPR availablePANTHERPTHR11205:SF1928S RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 13..155
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 20..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig68740contigH-paniculata_contig68740:241..711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig68740.14791.1mRNA_H-paniculata_contig68740.14791.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig68740 241..711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig68740.14791.1 ID=prot_H-paniculata_contig68740.14791.1|Name=mRNA_H-paniculata_contig68740.14791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MSRRTNKKRKFPNADAVYDSFLVNLMISKILKSGKKTVAQKIIYEAFDII
KQRTNSQPLKIFEKAVKNVSPAVKIKAKRVGGSTYQVPIEVKKFRGINLG
LCWIIQFARARSGKTIAIKLANEIIDASKGSGNSIRKRDETHRMARSNKA
FAHFRS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR005717Ribosomal_S7_bac/org-type
IPR023798Ribosomal_S7_dom
IPR036823Ribosomal_S7_dom_sf
IPR020606Ribosomal_S7_CS