prot_H-paniculata_contig6871.14789.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6871.14789.1
Unique Nameprot_H-paniculata_contig6871.14789.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length456
Homology
BLAST of mRNA_H-paniculata_contig6871.14789.1 vs. uniprot
Match: A0A6H5JQ29_9PHAE (DENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ29_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 2.340e-70
Identity = 182/430 (42.33%), Postives = 229/430 (53.26%), Query Frame = 0
Query:    1 VVPFWKAKLSLDRKNAASEERAGSPPRIAPPNWGASGRGRGVSSPADQGSPERARSYTQAAFLVGLDAELVRLATVSPSAGKRRDGARNSSQGRVWGVRSTDSCVVSVN-DDQADDAGISTTQPGAAVLESVRCMLSQSVHVDLDHDEITWPSVSRDHETFGCPSSNDVTDENSTASRNSGELLSQRPDSMSEVDGGSGSRGRGC-------GAPPAWPAEAAWRARRVMQATLFPEFETFDAVSSTPPDGSDGDPSIDPSNPNNSGDSKDGRRRQCSDXXXXXXXXXXXXXXEVRLRDKIEASRASSSAGIXXXXXXXXXXXXXXXXXXXXLTGANSRRRSVSA---SLSESVVGMYQPTPGDLALRAAAAGLMGSVLGRVKEFTTLFAQAGLLRFDTDGFVTAVAKTAVAAANRNKNLAATSSLAASG 419
            VV FW++K++LD+K A +  R+GSPPRI P +WGASGRG G  SP     P          FLVGLD ELVR+A         R+G   S +G VWGV S++ C+V    +++A  +GI+TTQP  A+LE VRC++ QSVHVDLDHD+ITWP       +           +  T S  SG+   ++     E  G +G  G          G P  WP EAA RARRV+Q+TLFP+FETFD VS TPP   D D     S              +CS               E  LRDK+EA R S++A                         A++ RR +S    +L+ES+VGMY PT  DLALRAA AGL+ SVLGRVKEFTTLFAQAGL+RFDT GFV AVA   +   ++       S L  SG
Sbjct:  498 VVSFWRSKVALDKKTALNHGRSGSPPRITPGSWGASGRG-GRGSPGXXXXPPPTPRVRATPFLVGLDGELVRMAM--------RNGG-GSGKGVVWGVASSEPCMVPEGAEEEAGASGIATTQPSPALLEVVRCIVKQSVHVDLDHDDITWPPPQAPDPSTAXXXXXXXXSK--TDSLGSGK---EKKKGXEEAAGATGDEGXXXXXXXXXVGVPLVWPEEAARRARRVVQSTLFPDFETFDVVSETPPQVDDFDXXXXXS-----------ALFKCS--------GLSGGGAEASLRDKVEACRTSAAA-------------------------ASASRRGISGGAGTLTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVATRGIGGGSKTDAGGGNSVLVGSG 868          
BLAST of mRNA_H-paniculata_contig6871.14789.1 vs. uniprot
Match: D8LDP3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP3_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 1.820e-58
Identity = 165/423 (39.01%), Postives = 205/423 (48.46%), Query Frame = 0
Query:    7 AKLSLDRKNAASEERAGSPPRIAPPNWGASGRG-RGVSSPADQGSPERARSYTQAAFLVGLDAELVRLATVSPSAGKRRDGARNSSQGRVWGVRSTDSCVVSVN-DDQADDAGISTTQPGAAVLESVRCMLSQSVHVDLDHDEITWPSVSRDHETFGCPSSNDVTDENSTASRNSGELLSQRPDSMSEVDGGSG------SRGRG----------------------CGAPPAWPAEAAWRARRVMQATLFPEFETFDAVSSTPPDGSDGDPSIDPSNPNNSGDSKDGRRRQCSDXXXXXXXXXXXXXXEVRLRDKIEASRASSSAGIXXXXXXXXXXXXXXXXXXXXLTGANSRRRSVSA---SLSESVVGMYQPTPGDLALRAAAAGLMGSVLGRVKEFTTLFAQAGLLRFDTDGFVTAVA 396
            A+++LD+K A +   +GSPPR+ P +WG SGRG RG                    FLVGLD ELVR+A        +   A  +  G VWGV S+++C+V    +++A  +GI+TTQP  A+LE VRCM+ QSVHVDLDHD+ITWP                                 Q PD+    +G  G      S G G                       GAPP WP EAA RARRV+++TLFP+FETFD V     D                    D    +CS               E  LRDK+EA R S++A                         A++ RR VS    +L+ES+VGMY PT  DLALRAA AGL+ SVLGRVKEFTTLFAQAGL+RFDT GFV AVA
Sbjct:  963 AEVALDKKTALNHGGSGSPPRLTPGSWGPSGRGGRGSPGXXXXXXXXXTPRVRATPFLVGLDGELVRMAMRKGGGSGKGVKAGPAGPGEVWGVASSEACMVPEGAEEEAGASGIATTQPSPALLEVVRCMVKQSVHVDLDHDDITWPPP-------------------------------QAPDTPPAEEGEGGGTAKTDSLGSGKEXXXXXXXXXXXXXXXXXXXXVGAPPVWPEEAARRARRVVKSTLFPDFETFDVVDDLDXD-------------------DDSALFKCS--------GLSGGGVEASLRDKVEACRTSAAA-------------------------ASAPRRGVSGGAGTLTESIVGMYIPTTADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVA 1302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6871.14789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQ29_9PHAE2.340e-7042.33DENN domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LDP3_ECTSI1.820e-5839.01RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6871contigH-paniculata_contig6871:6334..11783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6871.14789.1mRNA_H-paniculata_contig6871.14789.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6871 6334..11783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6871.14789.1 ID=prot_H-paniculata_contig6871.14789.1|Name=mRNA_H-paniculata_contig6871.14789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=456bp
VVPFWKAKLSLDRKNAASEERAGSPPRIAPPNWGASGRGRGVSSPADQGS
PERARSYTQAAFLVGLDAELVRLATVSPSAGKRRDGARNSSQGRVWGVRS
TDSCVVSVNDDQADDAGISTTQPGAAVLESVRCMLSQSVHVDLDHDEITW
PSVSRDHETFGCPSSNDVTDENSTASRNSGELLSQRPDSMSEVDGGSGSR
GRGCGAPPAWPAEAAWRARRVMQATLFPEFETFDAVSSTPPDGSDGDPSI
DPSNPNNSGDSKDGRRRQCSDDDSAALFSGGGGGGEVRLRDKIEASRASS
SAGISSSSSSGIAAASVLSAAAAVLTGANSRRRSVSASLSESVVGMYQPT
PGDLALRAAAAGLMGSVLGRVKEFTTLFAQAGLLRFDTDGFVTAVAKTAV
AAANRNKNLAATSSLAASGGGPSGSYSSGSSSVAPGGGRDAKAGGEGSQG
AVDEKK
back to top