mRNA_H-paniculata_contig6682.14569.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: D7G2H9_ECTSI (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H9_ECTSI) HSP 1 Score: 383 bits (983), Expect = 1.270e-126 Identity = 207/297 (69.70%), Postives = 235/297 (79.12%), Query Frame = 3
Query: 3 ENMKGITGSRHKVRPSTTRLDMSAN--TAATAAGTDTTPLDC-SALEFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKG-SAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
E +KG SR R S TRL +A T +T + + P D S+LEF+S E +H H+EGQ KLPLGFRVGTD L FV +EVP EPSDRWAAVFTRN+FPGAPVI+G+ERLAAEG AIQ V+VNNK+SNVCP GD G G SAGVADSESI Q+ A+VFG G V+PCSTGVIGWRLPV+AIC+ L VKAKMQS+SL+PA KSIMTTDRYPK+RGTEVGSNGGRLVGIAKGAGMIEP+MATMLVY++TDLQIPREKMRELLSKK+DA+FNCISIDSDTSTS
Sbjct: 31 EKVKGFARSRGPFRRSATRLASTAGAETTSTISTSSGPPTDAASSLEFNSEEAYHDHLEGQGKLPLGFRVGTDGLRFVPKEVPT------------EPSDRWAAVFTRNMFPGAPVIVGKERLAAEGRAIQAVVVNNKISNVCPGGDGEGGGASAGVADSESICQRAAEVFGLEGGAGAVIPCSTGVIGWRLPVDAICDHLAPVKAKMQSASLYPACKSIMTTDRYPKMRGTEVGSNGGRLVGIAKGAGMIEPDMATMLVYLVTDLQIPREKMRELLSKKSDASFNCISIDSDTSTS 315
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: A0A835Z9Q2_9STRA (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q2_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.540e-92 Identity = 152/251 (60.56%), Postives = 189/251 (75.30%), Query Frame = 3
Query: 132 EFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVP-KKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
EF++ +E+ A + Q LP GF VG +F EVP KK MNVT I LDEP++ WAAVFTRN+FPGAPV++GR RLA+ G ++QG++VNNK+SNVCP G++ AG DSE++ K+A+V+GF G VLP STGVIGWRLP +AI + L V+ ++Q SL PAA+SIMTTDRYPKLRG VG+ G +VGIAKGAGMIEPNMATMLVYILTDL +PR ++ LL K DA+FNCIS+DSDTSTS
Sbjct: 57 EFANKDEYLAFLREQGDLPAGFSVGAAGFSFSPIEVPTKKSIMNVTVIALDEPTENWAAVFTRNLFPGAPVLVGRRRLAS-GASLQGIVVNNKISNVCPGGEAG----AGERDSEAVCGKVAEVWGFAGGADAVLPSSTGVIGWRLPTQAILDNLSLVQGRIQRDSLAPAARSIMTTDRYPKLRGCRVGATGASVVGIAKGAGMIEPNMATMLVYILTDLDVPRSALQSLLRAKVDASFNCISVDSDTSTS 302
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: UPI001F56F385 (bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ n=1 Tax=Anaeromyxobacter sp. SG63 TaxID=2925408 RepID=UPI001F56F385) HSP 1 Score: 248 bits (633), Expect = 1.600e-74 Identity = 137/251 (54.58%), Postives = 167/251 (66.53%), Query Frame = 3
Query: 129 LEFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
L F+S EH A +E Q+ LP GFRVGT +FV EVPK MN+T + LD PS +AA FTRN FPGAPVI+GR RL +G ++ ++VNNKVSNVC G GV SE + + + G VLPCSTGVIGWRLPV+ + L +Q S+ PAA++IMTTD YPK+R E+G GG +VG AKGAGMIEPN+ATMLV+ILTDL +PR +R L +ATFNCISIDSDTSTS
Sbjct: 6 LTFASKAEHRAWLESQAALPEGFRVGTCAFDFVPVEVPKPGRMNLTLVALDRPSPAFAAKFTRNAFPGAPVIVGRRRL--DGESLGALVVNNKVSNVCAPG--------GVEASERVCAEAGRLLGLAP--EQVLPCSTGVIGWRLPVDKMVEALPQAHGALQGRSVLPAAEAIMTTDLYPKIRRAELG--GGSIVGFAKGAGMIEPNLATMLVFILTDLDVPRGALRAALDAAVEATFNCISIDSDTSTS 242
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: A0A290Q6Z9_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Nibricoccus aquaticus TaxID=2576891 RepID=A0A290Q6Z9_9BACT) HSP 1 Score: 246 bits (629), Expect = 6.110e-74 Identity = 134/251 (53.39%), Postives = 170/251 (67.73%), Query Frame = 3
Query: 129 LEFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
L FSS + H + Q+ LP GFRVGT F+ +E PK M +T I LD+P+ +AA+FTRN FPGAP+I+GR+RL A+ +IVNNK+SNVC G GV SE I K A + G + VLP STGVIGW LPV+AI N L A + +SS+ PAA+ I+TTD YPK+R ++G GG +VGIAKGAGMIEPN+ATMLVYILTD+ IPR ++R +L++ D +FN ISIDSDTSTS
Sbjct: 6 LTFSSRDAHRTWLASQASLPAGFRVGTTRFEFMPREAPKPAKMTLTLITLDQPTPDFAAMFTRNAFPGAPIIVGRKRLDEP--ALGAIIVNNKISNVCAPG--------GVEASEQICAKAAALLGIAP--TSVLPSSTGVIGWTLPVDAILNGLPAAAASLTASSILPAAEGIVTTDLYPKIRRADLG--GGSIVGIAKGAGMIEPNLATMLVYILTDIAIPRAELRTMLARAVDVSFNTISIDSDTSTS 242
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: A0A250IIC9_9DELT (Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Archangiaceae TaxID=39 RepID=A0A250IIC9_9DELT) HSP 1 Score: 246 bits (629), Expect = 9.160e-74 Identity = 135/251 (53.78%), Postives = 167/251 (66.53%), Query Frame = 3
Query: 129 LEFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
L FSS E H +EGQS LP GFRVG +F+ EV + MN+T +VLDEP+ +AAVFT+N FPGAPV++GRERL E + +I+NNKVSNVC G G SE + +A G T S VLPCSTGVIGWRLPV+A+ + A + S+ PAA+ IMTTD YPK+R +VG G +VGIAKGAGMIEPN+ATMLV++LTDL +PR+ +R L A TF CIS+DSDTSTS
Sbjct: 20 LTFSSAEAHRTWLEGQSALPRGFRVGRTRFDFMPAEVARPAKMNLTLVVLDEPTPAFAAVFTKNAFPGAPVLVGRERL--ESPTLGALIINNKVSNVCAPG--------GREASERVCAAVAAGLGLT--ASQVLPCSTGVIGWRLPVDAMEQAVPAAVASLAGGSVLPAAEGIMTTDLYPKVRRAQVGEGG--IVGIAKGAGMIEPNLATMLVFLLTDLDVPRDTLRACLRSVASRTFGCISVDSDTSTS 256
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: A0A8F9TW03_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Oleiharenicola sp. KSB-15 TaxID=2862869 RepID=A0A8F9TW03_9BACT) HSP 1 Score: 246 bits (627), Expect = 1.210e-73 Identity = 138/252 (54.76%), Postives = 174/252 (69.05%), Query Frame = 3
Query: 129 LEFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAA-EGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
LEFSS +H A + Q+ LPLGFRVGT FV +E PK M +T I LDEP+ +AAVFTRN FPGAP+++GR RL++ E GAI IVNNK+SNVC G GV +E I A + G + + VLP STGVIGW LPV+AI L A + ++S+ PAA+ I+TTD YPK+R EV +GGR+VGIAKGAGMIEPN+ATMLVYILTD+ +PR ++R +L++ +FN ISIDSDTSTS
Sbjct: 6 LEFSSRADHRAWLAAQAALPLGFRVGTSRFEFVPREAPKPARMTLTLIALDEPTTDFAAVFTRNAFPGAPIVVGRARLSSPELGAI---IVNNKISNVCAPG--------GVDAAERICAATAQLLG--RKSTEVLPSSTGVIGWTLPVDAILAALPATHAALTATSILPAAEGIVTTDLYPKIRCAEV--SGGRIVGIAKGAGMIEPNLATMLVYILTDVAVPRAELRAMLTRVVQPSFNAISIDSDTSTS 242
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: A0A0E3YVV1_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Verrucomicrobia bacterium IMCC26134 TaxID=1637999 RepID=A0A0E3YVV1_9BACT) HSP 1 Score: 245 bits (625), Expect = 2.410e-73 Identity = 131/249 (52.61%), Postives = 168/249 (67.47%), Query Frame = 3
Query: 135 FSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
FSS E H A + + LP GFRVGT +F+ +E PK M +T I LDEP+ +AA+FTRN FPGAPVI+GR RLAA + +++NNK+SNVC G GV SE++ + G VLPCSTGVIGW LPVEA+ L +A + S+ PAA+ I+TTD +PK+R +G GGR+VGIAKGAGMIEPN+ATMLVY+LTDL +PRE++R +L++ D TFN IS+DSDTSTS
Sbjct: 8 FSSREAHRAWLSSLAALPQGFRVGTTRFDFMPKEAPKPARMTLTLIALDEPTPDFAALFTRNAFPGAPVIVGRRRLAAP--KLGAILINNKISNVCAPG--------GVEASEALCSAAGGLLGLK--ADEVLPCSTGVIGWGLPVEAMVAALPKAQAALAGGSVMPAAEGIVTTDLFPKVRSASIG--GGRIVGIAKGAGMIEPNLATMLVYVLTDLAVPREQLRAILARVGDETFNRISVDSDTSTS 242
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: UPI001EF0A482 (bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI001EF0A482) HSP 1 Score: 245 bits (626), Expect = 2.560e-73 Identity = 137/253 (54.15%), Postives = 167/253 (66.01%), Query Frame = 3
Query: 129 LEFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTSVS 887
L F S E H +EGQS LP GFRVG L F+ EV K MN+T IVLDEP+ +AA+FTRN FPGAPV+IGRERL + V+VNNKVSNVC G GV SE + +A G + S VLPCSTGVIGWRLPV+A+ + + + + S+ PAA+ IMTTD YPK+R VGS G +VGIAKGAGMIEPN+ATMLV+++TD+ +PRE +R L TF CIS+DSDTSTS S
Sbjct: 20 LTFPSAEAHRNWLEGQSALPRGFRVGRTSLEFMPVEVAKPAKMNLTLIVLDEPTPSFAALFTRNAFPGAPVLIGRERLKEP--TLGAVVVNNKVSNVCAPG--------GVEASERLCAAVAGKLGLS--ASHVLPCSTGVIGWRLPVDAMVEAVPQAVSALDTGSVMPAAEGIMTTDLYPKVRRATVGS--GSIVGIAKGAGMIEPNLATMLVFLMTDVDVPREALRTTLHAVTQRTFGCISVDSDTSTSDS 258
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: A0A556QS18_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Rariglobus hedericola TaxID=2597822 RepID=A0A556QS18_9BACT) HSP 1 Score: 244 bits (624), Expect = 3.390e-73 Identity = 136/252 (53.97%), Postives = 171/252 (67.86%), Query Frame = 3
Query: 126 ALEFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
AL FSS +EH A + QS LPLGFRVGT +F+ +E PK M +T I LD+P+ +AA+FT+N FPGAPVI+GR+RL + +IVNNK+SNVC G GV SE + + A + G + VLP STGVIGW LP + I L A + + S+ PAA+ I+TTD YPK+R VG+ GR+VGIAKGAGMIEPNMATMLVYILTDL +PR+ +R LL+K +A+FN ISIDSDTSTS
Sbjct: 5 ALSFSSRDEHRAWLATQSALPLGFRVGTARFDFMPKEAPKPAKMTLTLIALDKPTPDFAAMFTKNAFPGAPVIVGRQRLDEP--LLGAIIVNNKISNVCAPG--------GVETSERVCVETAKLLGLP--ATAVLPSSTGVIGWGLPADDIVANLPKAAAALAAGSIMPAAEGIVTTDLYPKVRSAAVGA--GRIVGIAKGAGMIEPNMATMLVYILTDLAVPRDTLRALLTKTVNASFNRISIDSDTSTS 242
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Match: W7THG9_9STRA (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THG9_9STRA) HSP 1 Score: 247 bits (631), Expect = 4.010e-73 Identity = 132/253 (52.17%), Postives = 174/253 (68.77%), Query Frame = 3
Query: 123 SALEFSSLEEHHAHMEGQSKLPLGFRVGTDDLNFVSQEVPKKVTMNVTAIVLDEPSDRWAAVFTRNVFPGAPVIIGRERLAAEGGAIQGVIVNNKVSNVCPAGDSAGKGSAGVADSESISQKMADVFGFTQGGSVVLPCSTGVIGWRLPVEAICNQLEGVKAKMQSSSLFPAAKSIMTTDRYPKLRGTEVGSNGGRLVGIAKGAGMIEPNMATMLVYILTDLQIPREKMRELLSKKADATFNCISIDSDTSTS 881
S+L FSS E++ AH++ +LP GF+ GT ++F E MNVT I LDEP+D++A FT+N FPGAP+ +GRERL +Q ++VNNK+SNVCP G+ G GV D+E + Q +A G G +VLP STGVIGWRLP +AI + + V MQ++S+ PAA I+TTDRYPK+R V GG++VGIAKGAGMIEPN+ATMLVY+LTDL +PR+ +R L + +FNCIS+DSD STS
Sbjct: 94 SSLSFSSKEDYLAHLKRIGQLPAGFKCGTSWISFTPVEANFPSRMNVTLIALDEPTDKFAIAFTKNAFPGAPIRVGRERLKET--HLQAIVVNNKISNVCPGGE----GDGGVGDAEEVCQAVARRLGLPS-GKLVLPSSTGVIGWRLPRQAIIDAVPRVLETMQAASVVPAAAGILTTDRYPKVRAATVA--GGKIVGIAKGAGMIEPNLATMLVYLLTDLALPRDVLRAWLPEVVGGSFNCISVDSDQSTS 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6682.14569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6682.14569.1 >prot_H-paniculata_contig6682.14569.1 ID=prot_H-paniculata_contig6682.14569.1|Name=mRNA_H-paniculata_contig6682.14569.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=294bp MKGITGSRHKVRPSTTRLDMSANTAATAAGTDTTPLDCSALEFSSLEEHHback to top mRNA from alignment at H-paniculata_contig6682:2..7200- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6682.14569.1 ID=mRNA_H-paniculata_contig6682.14569.1|Name=mRNA_H-paniculata_contig6682.14569.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7199bp|location=Sequence derived from alignment at H-paniculata_contig6682:2..7200- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6682:2..7200- >mRNA_H-paniculata_contig6682.14569.1 ID=mRNA_H-paniculata_contig6682.14569.1|Name=mRNA_H-paniculata_contig6682.14569.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1764bp|location=Sequence derived from alignment at H-paniculata_contig6682:2..7200- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |