prot_H-paniculata_contig6599.14471.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6599.14471.1
Unique Nameprot_H-paniculata_contig6599.14471.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: UPI0019007968 (secreted RxLR effector protein 161-like n=1 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019007968)

HSP 1 Score: 94.0 bits (232), Expect = 5.360e-22
Identity = 57/114 (50.00%), Postives = 67/114 (58.77%), Query Frame = 0
Query:   11 GRSGNSTEYRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGITF--GGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQ 122
            G+  NST Y+ MVGSLMY +T +RPDI +AV    R M  P    F   KRI R L   P LGI +  G K N   L GF D+D V D+ D KST GY+F L  GAISW  +KQ
Sbjct:   23 GKKVNSTIYKQMVGSLMYLTT-TRPDIMYAVSLISRFMESPTELHFLAAKRILRYLKGTPGLGILYQKGEKLN---LVGFSDSDYVGDLNDRKSTPGYIFMLGSGAISWSSKKQ 132          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: A0A4Y1REE4_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1REE4_PRUDU)

HSP 1 Score: 95.5 bits (236), Expect = 1.270e-20
Identity = 53/126 (42.06%), Postives = 71/126 (56.35%), Query Frame = 0
Query:    2 GTGVQESRSGRSGNSTEYRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGI-----TFGGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQ 122
            GT + +   GR  +ST ++ +VGSLMY  T +RPD+ FAV    R M  P    + T KR+ R L    DLG+     T   K  G  L GF D+D   D++D KST+GYVF L+  A+SW  +KQ
Sbjct:  158 GTKLNKDVGGREVDSTHFKQIVGSLMY-LTATRPDLMFAVSLISRYMESPTELHYQTAKRVLRYLKGTTDLGLFYKKETINKKEAGDELMGFSDSDYAGDLDDRKSTSGYVFMLSSAAVSWSSKKQ 282          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: A0A2P6V0U2_9CHLO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0U2_9CHLO)

HSP 1 Score: 95.1 bits (235), Expect = 1.300e-20
Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   19 YRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGITFGGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQ 122
            Y  +VGSLMY S  +RPDIA AV    R M +P  + ++  K + R LT  PD+GITFG    G  L+ F DAD   D++  +STTGY F  N GAISW  R Q
Sbjct:  182 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGPPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQ 283          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: A0A2P6UYX8_9CHLO (Retrotransposon Ty1-copia subclass n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYX8_9CHLO)

HSP 1 Score: 95.5 bits (236), Expect = 1.310e-20
Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   19 YRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGITFGGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQ 122
            Y  +VGSLMY S  +RPDIA AV    R M +P  + ++  K + R LT  PD+GITFG    G  L+ F DAD   D++  +STTGY F  N GAISW  R Q
Sbjct:  184 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQ 285          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: UPI0016530422 (secreted RxLR effector protein 161-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI0016530422)

HSP 1 Score: 92.4 bits (228), Expect = 1.610e-20
Identity = 51/107 (47.66%), Postives = 66/107 (61.68%), Query Frame = 0
Query:   19 YRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGITF--GGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQQ 123
            YR +VGSLMY  T +RPDI FAV +  R M +P R  +   KRI R +    + GIT+  GGK+    L GF D+D   DV+D KST+GY+F L  G ISW  +KQ+
Sbjct:   75 YRSLVGSLMY-LTNTRPDIMFAVSKVSRFMENPRRSHWEAAKRILRYIKGTQNQGITYSKGGKKI---LVGFSDSDYAGDVDDSKSTSGYIFHLGSGPISWQSKKQK 177          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: A0A2P6UYV9_9CHLO (Retrovirus-related Pol poly from transposon TNT 1-94 n=3 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV9_9CHLO)

HSP 1 Score: 95.5 bits (236), Expect = 2.060e-20
Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   19 YRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGITFGGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQ 122
            Y  +VGSLMY S  +RPDIA AV    R M +P  + ++  K + R LT  PD+GITFG    G  L+ F DAD   D++  +STTGY F  N GAISW  R Q
Sbjct:  736 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQ 837          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: A0A4Y1QMM4_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QMM4_PRUDU)

HSP 1 Score: 95.5 bits (236), Expect = 2.090e-20
Identity = 53/126 (42.06%), Postives = 71/126 (56.35%), Query Frame = 0
Query:    2 GTGVQESRSGRSGNSTEYRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGI-----TFGGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQ 122
            GT + +   GR  +ST ++ +VGSLMY  T +RPD+ FAV    R M  P    + T KR+ R L    DLG+     T   K  G  L GF D+D   D++D KST+GYVF L+  A+SW  +KQ
Sbjct: 1006 GTKLNKDVGGREVDSTHFKQIVGSLMY-LTATRPDLMFAVSLISRYMESPTELHYQTAKRVLRYLKGTTDLGLFYKKETINKKEAGDELMGFSDSDYAGDLDDRKSTSGYVFMLSSAAVSWSSKKQ 1130          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: A0A2P6UYV5_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV5_9CHLO)

HSP 1 Score: 95.5 bits (236), Expect = 2.120e-20
Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   19 YRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGITFGGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQ 122
            Y  +VGSLMY S  +RPDIA AV    R M +P  + ++  K + R LT  PD+GITFG    G  L+ F DAD   D++  +STTGY F  N GAISW  R Q
Sbjct:  840 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQ 941          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: A0A2P6UZ08_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ08_9CHLO)

HSP 1 Score: 95.5 bits (236), Expect = 2.150e-20
Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   19 YRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGITFGGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQ 122
            Y  +VGSLMY S  +RPDIA AV    R M +P  + ++  K + R LT  PD+GITFG    G  L+ F DAD   D++  +STTGY F  N GAISW  R Q
Sbjct: 1002 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQ 1103          
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Match: UPI001AD8DFC8 (secreted RxLR effector protein 161-like n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8DFC8)

HSP 1 Score: 90.1 bits (222), Expect = 2.320e-20
Identity = 51/122 (41.80%), Postives = 69/122 (56.56%), Query Frame = 0
Query:    2 GTGVQESRSGRSGNSTEYRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRDPCREDFSTCKRIFRCLTTVPDLGITFGGKRNGHRLEGFVDADCVEDVEDPKSTTGYVFKLNVGAISWCPRKQQ 123
            G  + ++  G+  N+T Y+ +VGSLMY  T +RPDI   V    R M +P  E F   KRIF  L    DLGI F  K     L GF D+D   D++D +ST+G+VF +  G +SW  +KQQ
Sbjct:   38 GLKLMKNSRGKKVNNTLYKKIVGSLMY-LTATRPDIKHGVSLVSRYMENPTEEHFLAAKRIFLYLQGTIDLGI-FYKKGEQSSLIGFTDSDYAGDIDDRRSTSGHVFVMGTGTVSWSSKKQQ 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6599.14471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00190079685.360e-2250.00secreted RxLR effector protein 161-like n=1 Tax=Be... [more]
A0A4Y1REE4_PRUDU1.270e-2042.06Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A2P6V0U2_9CHLO1.300e-2048.08Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2P6UYX8_9CHLO1.310e-2048.08Retrotransposon Ty1-copia subclass n=1 Tax=Micract... [more]
UPI00165304221.610e-2047.66secreted RxLR effector protein 161-like n=1 Tax=He... [more]
A0A2P6UYV9_9CHLO2.060e-2048.08Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A4Y1QMM4_PRUDU2.090e-2042.06Transposable element protein (Fragment) n=1 Tax=Pr... [more]
A0A2P6UYV5_9CHLO2.120e-2048.08Gag-Pol poly (Fragment) n=1 Tax=Micractinium condu... [more]
A0A2P6UZ08_9CHLO2.150e-2048.08Gag-Pol poly (Fragment) n=1 Tax=Micractinium condu... [more]
UPI001AD8DFC82.320e-2041.80secreted RxLR effector protein 161-like n=1 Tax=Ro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 15..123
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 15..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6599contigH-paniculata_contig6599:11390..11761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6599.14471.1mRNA_H-paniculata_contig6599.14471.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6599 10688..12091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6599.14471.1 ID=prot_H-paniculata_contig6599.14471.1|Name=mRNA_H-paniculata_contig6599.14471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MGTGVQESRSGRSGNSTEYRGMVGSLMYGSTGSRPDIAFAVHQAVRRMRD
PCREDFSTCKRIFRCLTTVPDLGITFGGKRNGHRLEGFVDADCVEDVEDP
KSTTGYVFKLNVGAISWCPRKQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like