prot_H-paniculata_contig65408.14396.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig65408.14396.1
Unique Nameprot_H-paniculata_contig65408.14396.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length84
Homology
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BLAST of mRNA_H-paniculata_contig65408.14396.1 vs. uniprot
Match: A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 8.890e-20
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:    1 ELQSWDEECLAKHLDAINGSAISLEELQDLCLMNNESVVQVMDLAGVVNAPGLLTDVTQRCRLTLTDKNRLIFTQVG 77
            +L+ WD EC  KHLDAI  S  + ++L +  LM  E VV  +DLAG+V+APGL  D+TQRCR+  T+K RLIFTQ  
Sbjct:   21 DLEEWDIECATKHLDAIKDSVTTHDDLHEFTLMKGEKVVNALDLAGLVDAPGLFDDLTQRCRVVFTNKKRLIFTQAN 97
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BLAST of mRNA_H-paniculata_contig65408.14396.1 vs. uniprot
Match: D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 4.280e-6
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:   33 MNNESVVQVMDLAGVVNAPGLLTDVTQRCRLTLTDKNRLIFTQVG 77
            M  E  V V+DLAG+ +APGL   VTQ+CR+  T++ RL+FTQ  
Sbjct:    1 MKGEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNEKRLVFTQAN 45
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65408.14396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KA59_9PHAE8.890e-2053.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWP8_ECTSI4.280e-651.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65408contigH-paniculata_contig65408:177..428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65408.14396.1mRNA_H-paniculata_contig65408.14396.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig65408 177..428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig65408.14396.1 ID=prot_H-paniculata_contig65408.14396.1|Name=mRNA_H-paniculata_contig65408.14396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=84bp
ELQSWDEECLAKHLDAINGSAISLEELQDLCLMNNESVVQVMDLAGVVNA
PGLLTDVTQRCRLTLTDKNRLIFTQVGLRIQHR*
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