mRNA_H-paniculata_contig6472.14299.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6472.14299.1
Unique NamemRNA_H-paniculata_contig6472.14299.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A438H3Q3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H3Q3_VITVI)

HSP 1 Score: 127 bits (320), Expect = 7.090e-30
Identity = 74/209 (35.41%), Postives = 114/209 (54.55%), Query Frame = 2
Query:  575 RNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETS-RIRAMSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVN 1198
            + +L  +F++ DLG+A F +  H+ R+R    L L Q  Y+  +  +      + R   ++     S+   PK   EK+++ +FPY  A+G+LM     TRP IA  V ++ R   NPG  H K   +++QYL  T +  +T  R+   L +  Y+ SDF  CLD++RS SG + MLA GA+SW S  Q + A  T+EAE +A  E+ N
Sbjct:  105 KRFLSSKFDMKDLGNASFVLGIHIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAPRDTPVAKGNKFSLHQCPKNELEKKDMERFPYASAIGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMQYLQRTKDYMLTY-RRSSHLEIVGYSDSDFARCLDSKRSTSGYIFMLAGGAVSWKSVKQTLIASSTMEAEFIACYEASN 312          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A6A3IVK9_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3IVK9_9STRA)

HSP 1 Score: 125 bits (314), Expect = 9.270e-30
Identity = 74/218 (33.94%), Postives = 119/218 (54.59%), Query Frame = 2
Query:  572 IRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETSRIRAMSG-APALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCG-----RQGCGLSMEEYTGSDFGACLDTRRSVSGRVVML-AKGAISWHSRVQEIAAWGTLEAEDVAVSESVNDV 1204
            +++ L+ RF + DLG   + + +H+ R R  R + + Q  Y   + ++    +   +R+    +  LS  D P+T EEK+ + KFPY EAVG+ M     TRP +A  +R V+R  +NPGP H   +++ ++YL  T   GIT G     +     ++  Y+ +D+   +DTRRSVSG V  L     ISW S +Q++    T EAE VA++ +V +V
Sbjct:   46 MKDILKRRFQMADLGGVSYPLGWHIERRRSERIIFVHQEKYATKVLDRFGLAQCRPVRSPEETSQKLSESDFPQTEEEKQNMEKFPYREAVGSFMYLMMGTRPDLANFIRQVSRYLQNPGPHHWNYVVRGLKYLNGTRNFGITLGARDVTKASLAHALSAYSDADYANSVDTRRSVSGYVTYLFGNSPISWRSSLQKLVTLATTEAEYVALASTVQEV 263          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A151QLV5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QLV5_CAJCA)

HSP 1 Score: 127 bits (320), Expect = 2.840e-29
Identity = 75/210 (35.71%), Postives = 113/210 (53.81%), Query Frame = 2
Query:  572 IRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETS-RIRAMSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVN 1198
            ++ +L   F++ D+G+A + +   + R R    L L Q  Y+  + E+   ++ S  +  +     L +   PK   E+E +   PY  AVG+LM     TRP IA AV V+ R   NPG  H KA  K+++YL  T +  +   R+   L +  Y+ SDF  C+DTR+S SG V MLA GA+SW SR Q + A  T+EAE V+  E+ +
Sbjct:  117 VKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKGDKLELSQCPKNNLEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGVDHWKAAKKVMRYLQGTKD-FMLIYRRTDSLEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQTLTATSTMEAEFVSCFEATS 325          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A2N9GE28_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GE28_FAGSY)

HSP 1 Score: 129 bits (323), Expect = 1.350e-28
Identity = 74/217 (34.10%), Postives = 119/217 (54.84%), Query Frame = 2
Query:  563 DGVIRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETSRIRA-MSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVNDVMF 1210
            D + R ++   F + D+G+A F +   +TR+R  + L L Q  Y++ + E+     +  I   M     LS+   PK  EEK +++K PY  A+G+LM     TRP I  AV +V+R   NPGPAH +A+ +I++YL  T +  +     G  L +  Y+ +D+ +  D R+S SG   +L  GA+SW S+ Q   A  T+E+E VA S +V + ++
Sbjct:  843 DSIPRVHITSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCY--HGGDLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVW 1057          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A2N9GPY6_FAGSY (Uncharacterized protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GPY6_FAGSY)

HSP 1 Score: 128 bits (322), Expect = 1.970e-28
Identity = 73/215 (33.95%), Postives = 118/215 (54.88%), Query Frame = 2
Query:  569 VIRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETSRIRA-MSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVNDVMF 1210
              + +L   F + D+G+A F +   +TR+R  + L L Q  Y++ + E+     +  I   M     LS+   PK  EEK +++K PY  A+G+LM     TRP I  AV +V+R   NPGPAH +A+ +I++YL  T++  +     G  L +  Y+ +D+ +  D R+S SG   +L  GA+SW S+ Q   A  T+E+E VA S +V + ++
Sbjct: 1186 TTKKWLSSTFEMKDIGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKMPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTIDHALCY--HGEDLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVW 1398          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A2N9IUC8_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUC8_FAGSY)

HSP 1 Score: 127 bits (320), Expect = 2.830e-28
Identity = 78/214 (36.45%), Postives = 118/214 (55.14%), Query Frame = 2
Query:  572 IRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETSR-IRAMSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVNDVMF 1210
            I+ +L   F + DLG+A + +   + R+RK R L L Q  Y+  +  +   +++ +          LS    PKT EE+E++   PY  AVG+LM     TRP I  AV +V+R   NPGP H  A+  I++YL  T    +  G +   L+++ YT SDF + +D R+S+SG V  L KGAISW S  Q+  A  T+EAE +A SE+  + ++
Sbjct:  528 IKMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFSPFRHGVHLSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSKD--LNIQGYTDSDFQSDIDDRKSISGFVFTLGKGAISWRSCKQDTTADSTIEAEYIAASEAAKEAVW 739          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A2N9H9J3_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H9J3_FAGSY)

HSP 1 Score: 127 bits (320), Expect = 2.900e-28
Identity = 73/215 (33.95%), Postives = 117/215 (54.42%), Query Frame = 2
Query:  569 VIRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETSRIRA-MSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVNDVMF 1210
              + +L   F + D+G+A F +   +TR+R  + L L Q  Y++ + E+     +  I   M     LS+   PK  EEK +++K PY  A+G+LM     TRP I  AV +V+R   NPGPAH +A+ +I++YL  T +  +     G  L +  Y+ +D+ +  D R+S SG   +L  GA+SW S+ Q   A  T+E+E VA S +V + ++
Sbjct:  564 TTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCY--HGGDLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVW 776          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A438JMN5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JMN5_VITVI)

HSP 1 Score: 126 bits (316), Expect = 2.910e-28
Identity = 83/226 (36.73%), Postives = 123/226 (54.42%), Query Frame = 2
Query:  560 DDGVIRN---YLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETSRIRAMSGAPALSIGDE------PKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVNDVMF 1210
            D G++R    YL   F++ D+G+A + +S  + R+R    L L Q  Y+  + E+   +  S     SG   +  GD+      P+   E+E++ K PY  AVG+LM   T TRP I+ AV ++ R   +PG  H KA  K+++YL  T +  +T  R    L +  Y+ SD+G CLD+ +S SG V MLA GAISW S  Q I A  T+EAE VA  E+ +  ++
Sbjct:  200 DLGLLRETKEYLSKNFHMVDMGEANYVISIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCS-----SGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYKRSE-QLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALW 419          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A2N9F135_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F135_FAGSY)

HSP 1 Score: 127 bits (320), Expect = 3.040e-28
Identity = 73/215 (33.95%), Postives = 117/215 (54.42%), Query Frame = 2
Query:  569 VIRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETSRIRA-MSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVNDVMF 1210
              + +L   F + D+G+A F +   +TR+R  + L L Q  Y++ + E+     +  I   M     LS+   PK  EEK +++K PY  A+G+LM     TRP I  AV +V+R   NPGPAH +A+ +I++YL  T +  +     G  L +  Y+ +D+ +  D R+S SG   +L  GA+SW S+ Q   A  T+E+E VA S +V + ++
Sbjct:  644 TTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCY--HGGDLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVW 856          
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Match: A0A2N9HQ47_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HQ47_FAGSY)

HSP 1 Score: 127 bits (320), Expect = 3.210e-28
Identity = 73/215 (33.95%), Postives = 117/215 (54.42%), Query Frame = 2
Query:  569 VIRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQSMAEKIRCRETSRIRA-MSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALMRTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*GITCGRQGCGLSMEEYTGSDFGACLDTRRSVSGRVVMLAKGAISWHSRVQEIAAWGTLEAEDVAVSESVNDVMF 1210
              + +L   F + D+G+A F +   +TR+R  + L L Q  Y++ + E+     +  I   M     LS+   PK  EEK +++K PY  A+G+LM     TRP I  AV +V+R   NPGPAH +A+ +I++YL  T +  +     G  L +  Y+ +D+ +  D R+S SG   +L  GA+SW S+ Q   A  T+E+E VA S +V + ++
Sbjct:  766 TTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCY--HGGDLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVW 978          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6472.14299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438H3Q3_VITVI7.090e-3035.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3IVK9_9STRA9.270e-3033.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151QLV5_CAJCA2.840e-2935.71Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9GE28_FAGSY1.350e-2834.10Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9GPY6_FAGSY1.970e-2833.95Uncharacterized protein n=6 Tax=Fagus sylvatica Ta... [more]
A0A2N9IUC8_FAGSY2.830e-2836.45Integrase catalytic domain-containing protein n=2 ... [more]
A0A2N9H9J3_FAGSY2.900e-2833.95Integrase catalytic domain-containing protein n=1 ... [more]
A0A438JMN5_VITVI2.910e-2836.73Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9F135_FAGSY3.040e-2833.95CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]
A0A2N9HQ47_FAGSY3.210e-2833.95Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6472contigH-paniculata_contig6472:3602..4811 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score95.9
Seed ortholog evalue2.2e-17
Seed eggNOG ortholog65672.G4TWW2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons1
Model size1210
Cds size585
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6472.14299.1prot_H-paniculata_contig6472.14299.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6472 4005..4589 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930754.585585-UTR-H-paniculata_contig6472:3601..40041622930754.585585-UTR-H-paniculata_contig6472:3601..4004Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6472 3602..4004 +
1691481437.53529-UTR-H-paniculata_contig6472:3601..40041691481437.53529-UTR-H-paniculata_contig6472:3601..4004Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6472 3602..4004 +
1622930754.6316857-UTR-H-paniculata_contig6472:4589..48111622930754.6316857-UTR-H-paniculata_contig6472:4589..4811Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6472 4590..4811 +
1691481437.5627465-UTR-H-paniculata_contig6472:4589..48111691481437.5627465-UTR-H-paniculata_contig6472:4589..4811Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6472 4590..4811 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930754.6091402-CDS-H-paniculata_contig6472:4004..45891622930754.6091402-CDS-H-paniculata_contig6472:4004..4589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6472 4005..4589 +
1691481437.549965-CDS-H-paniculata_contig6472:4004..45891691481437.549965-CDS-H-paniculata_contig6472:4004..4589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6472 4005..4589 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6472.14299.1

>prot_H-paniculata_contig6472.14299.1 ID=prot_H-paniculata_contig6472.14299.1|Name=mRNA_H-paniculata_contig6472.14299.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MLEYQVLRRHDGNLVRAVKDRPVHVQEGRRRRGGNGGGREHGQHSCPRKG
PRDDGVIRNYLRGRFNLTDLGDAEFYMSYHVTRNRKARELKLDQHIYVQS
MAEKIRCRETSRIRAMSGAPALSIGDEPKTPEEKEEVTKFPYGEAVGALM
RTATMTRPGIACAVRVVARSCENPGPAHKKAMIKIVQYLLHTME*
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mRNA from alignment at H-paniculata_contig6472:3602..4811+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6472.14299.1 ID=mRNA_H-paniculata_contig6472.14299.1|Name=mRNA_H-paniculata_contig6472.14299.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1210bp|location=Sequence derived from alignment at H-paniculata_contig6472:3602..4811+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACGAGAGGCGTGGAATAGTAGACAACAGACTATGGAAACACACGGCTCG ATCAAAGGTCAACCTTGTGGTGAGAACAAAAATGCTTTACAAACGCAAGG TCGGCAAGGACGGCAAGGTGGAGAAATTCGAATGTAGACTTGTCGCCCAG GGCTTCCGGCAGATGGAAGGGGTACACTATACGGAGAAGTACTCACCTAC GCCGGCAACCGCGTCCATCCGGATGCTCTTGGCGACCCCAGCGACGAAGG ACGGAGACCTGCGACACTTTGACGCAAACAGGCGTTTCTTAAGGAGGACA TGGATGAGGAGGTGTATACCGAGATCCCCGAAAGATTCCAACGATTCCCG GCAGCAGCGGGTAAGCTGAACAAGGCAATCTACGGGTTCGTTCAGTCAGG GCGATGCTGGAATATCAAGTTCTACGACGACATGACGGCAATCTCGTTCG AGCAGTCAAGGACAGACCCGTGCATGTTCAGGAAGGTCGTCGACGGAGAG GTGGAAATGGTGGTGGTCGTGAACATGGACAACATTCTTGCCCACGCAAA GGACCGCGCGACGATGGAGTGATTCGCAACTATCTAAGGGGAAGGTTCAA TCTAACGGACTTGGGTGATGCCGAGTTCTACATGAGTTATCACGTTACCC GAAACAGGAAGGCGCGCGAGCTGAAACTCGATCAACATATATACGTACAG TCGATGGCGGAAAAAATTCGATGTCGAGAGACGAGCAGGATACGAGCCAT GTCGGGAGCACCAGCATTATCAATAGGGGACGAACCGAAGACCCCGGAGG AGAAGGAGGAGGTGACGAAGTTCCCATATGGAGAGGCAGTGGGGGCGCTA ATGAGGACAGCGACGATGACTCGACCGGGTATAGCGTGCGCCGTACGTGT CGTTGCAAGGTCCTGCGAAAACCCCGGGCCAGCACACAAGAAGGCGATGA TTAAGATAGTGCAGTATTTATTACACACGATGGAATGAGGCATCACATGT GGTAGACAAGGCTGTGGGCTTAGCATGGAAGAATATACAGGCTCGGATTT TGGAGCCTGCTTGGACACTAGACGCTCGGTATCTGGTCGAGTCGTGATGT TAGCGAAGGGGGCGATAAGTTGGCATTCCAGGGTGCAGGAGATAGCGGCA TGGGGTACTTTGGAAGCAGAGGACGTAGCAGTGTCGGAATCAGTAAATGA TGTGATGTTT
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Coding sequence (CDS) from alignment at H-paniculata_contig6472:3602..4811+

>mRNA_H-paniculata_contig6472.14299.1 ID=mRNA_H-paniculata_contig6472.14299.1|Name=mRNA_H-paniculata_contig6472.14299.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig6472:3602..4811+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGGAATATCAAGTTCTACGACGACATGACGGCAATCTCGTTCGAGC
AGTCAAGGACAGACCCGTGCATGTTCAGGAAGGTCGTCGACGGAGAGGTG
GAAATGGTGGTGGTCGTGAACATGGACAACATTCTTGCCCACGCAAAGGA
CCGCGCGACGATGGAGTGATTCGCAACTATCTAAGGGGAAGGTTCAATCT
AACGGACTTGGGTGATGCCGAGTTCTACATGAGTTATCACGTTACCCGAA
ACAGGAAGGCGCGCGAGCTGAAACTCGATCAACATATATACGTACAGTCG
ATGGCGGAAAAAATTCGATGTCGAGAGACGAGCAGGATACGAGCCATGTC
GGGAGCACCAGCATTATCAATAGGGGACGAACCGAAGACCCCGGAGGAGA
AGGAGGAGGTGACGAAGTTCCCATATGGAGAGGCAGTGGGGGCGCTAATG
AGGACAGCGACGATGACTCGACCGGGTATAGCGTGCGCCGTACGTGTCGT
TGCAAGGTCCTGCGAAAACCCCGGGCCAGCACACAAGAAGGCGATGATTA
AGATAGTGCAGTATTTATTACACACGATGGAATGAATGCTGGAATATCAA
GTTCTACGACGACATGACGGCAATCTCGTTCGAGCAGTCAAGGACAGACC
CGTGCATGTTCAGGAAGGTCGTCGACGGAGAGGTGGAAATGGTGGTGGTC
GTGAACATGGACAACATTCTTGCCCACGCAAAGGACCGCGCGACGATGGA
GTGATTCGCAACTATCTAAGGGGAAGGTTCAATCTAACGGACTTGGGTGA
TGCCGAGTTCTACATGAGTTATCACGTTACCCGAAACAGGAAGGCGCGCG
AGCTGAAACTCGATCAACATATATACGTACAGTCGATGGCGGAAAAAATT
CGATGTCGAGAGACGAGCAGGATACGAGCCATGTCGGGAGCACCAGCATT
ATCAATAGGGGACGAACCGAAGACCCCGGAGGAGAAGGAGGAGGTGACGA
AGTTCCCATATGGAGAGGCAGTGGGGGCGCTAATGAGGACAGCGACGATG
ACTCGACCGGGTATAGCGTGCGCCGTACGTGTCGTTGCAAGGTCCTGCGA
AAACCCCGGGCCAGCACACAAGAAGGCGATGATTAAGATAGTGCAGTATT
TATTACACACGATGGAATGA
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