prot_H-paniculata_contig6458.14283.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6458.14283.1
Unique Nameprot_H-paniculata_contig6458.14283.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6458.14283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 23..56
e-value: 0.0075
score: 25.5
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 27..55
e-value: 2.5E-7
score: 30.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 18..89
e-value: 1.1E-8
score: 36.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 24..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6458contigH-paniculata_contig6458:8445..8759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6458.14283.1mRNA_H-paniculata_contig6458.14283.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6458 8445..8765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6458.14283.1 ID=prot_H-paniculata_contig6458.14283.1|Name=mRNA_H-paniculata_contig6458.14283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MDKVTKEPKRRCSSDRTVFCTYRYCTKNRGLCLIKMGKPEAALSDFSKAC
ELEPTVAVYHYQKASLLHHHFTRREIKSTHSPIKRALEIVISEVWRDDYS
DSILR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001440TPR_1
IPR011990TPR-like_helical_dom_sf