mRNA_H-paniculata_contig6371.14171.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: D8LBE2_ECTSI (Non ribosomal peptide synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBE2_ECTSI) HSP 1 Score: 296 bits (759), Expect = 4.280e-94 Identity = 147/164 (89.63%), Postives = 156/164 (95.12%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVMYFTNMKNLHEDEWERTVDVNCKG MFG+GAVLGGMIERGSGHIVNISSDAGRR+FP+LAVY ASK+FVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAA+ GV IGVKVGTGST QVLQP D+A+AVLYA+TAPS+VAVNEVLVEPRDQ
Sbjct: 92 AGVMYFTNMKNLHEDEWERTVDVNCKGTMFGIGAVLGGMIERGSGHIVNISSDAGRRIFPSLAVYCASKYFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAADEQGVAIGVKVGTGSTETQVLQPEDVAAAVLYAVTAPSHVAVNEVLVEPRDQ 255
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: A0A835ZEL1_9STRA (Non ribosomal peptide synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL1_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.680e-70 Identity = 119/164 (72.56%), Postives = 135/164 (82.32%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVMYFT+M +L EDEWE VDVNCKGVM GVGAVL GMI+RGSGHIVNISSDAGRRVFPALAVYS +K FVEA+SEGLRREVVGTG++VTTIQPGD +TDLV+NNTD A G+ VN VLQPSD+A AVLYA+TAP +VAVNE+++EPRDQ
Sbjct: 93 AGVMYFTHMAHLREDEWEHMVDVNCKGVMNGVGAVLKGMIDRGSGHIVNISSDAGRRVFPALAVYSGTKFFVEALSEGLRREVVGTGVRVTTIQPGDVSTDLVVNNTDAATAAXXXXXXXXXXXXGADVNAVLQPSDVAGAVLYAVTAPPHVAVNEIMIEPRDQ 256
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: A0A7S0WXH8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WXH8_9CHLO) HSP 1 Score: 235 bits (600), Expect = 2.210e-70 Identity = 114/164 (69.51%), Postives = 141/164 (85.98%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVMYFT MKNLHEDEWER VD+NCKGV+ GV AVL GM++R +GHI+NISSDAGR VFP+L VYSA+KHFV A+S+GLR+E++GT +KVT IQPGD ATDL+M NTDKEAA+A GV IG KVGTG +QVL DIASAV+YA+TAP++V ++E+++EP+DQ
Sbjct: 91 AGVMYFTLMKNLHEDEWERQVDINCKGVLNGVAAVLDGMVKRDAGHIINISSDAGRDVFPSLTVYSATKHFVWAISKGLRKELIGTKVKVTDIQPGDVATDLIMENTDKEAADALGVAIGQKVGTGLKRSQVLDVEDIASAVVYAVTAPAHVGIHELMIEPKDQ 254
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: A0A6G8Q6J5_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Rubrobacter tropicus TaxID=2653851 RepID=A0A6G8Q6J5_9ACTN) HSP 1 Score: 206 bits (523), Expect = 4.070e-59 Identity = 105/164 (64.02%), Postives = 128/164 (78.05%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVMYFT MKN+ E+EW+RTVDVNCKG + VGAVL GM+ERG GHIV ISSDAGRRVFP LAVYSASK FVEA+S+GLR E GTG+KVTTIQPG+ ATDL+ + D+EA + G P G +V L P D+A++++YAL+ P +VAVNE+LVEPRD+
Sbjct: 91 AGVMYFTLMKNVREEEWDRTVDVNCKGTVNCVGAVLPGMLERGRGHIVTISSDAGRRVFPGLAVYSASKFFVEALSQGLRLETAGTGVKVTTIQPGNVATDLLELSGDEEALQQYGQPTGARV---------LDPEDVAASIVYALSQPDHVAVNEILVEPRDE 245
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: A0A510HGT1_9ACTN (Oxidoreductase n=1 Tax=Rubrobacter xylanophilus TaxID=49319 RepID=A0A510HGT1_9ACTN) HSP 1 Score: 202 bits (513), Expect = 1.160e-57 Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVMY+T M+NL +EWERTV+VNCKGV+ VGAVLGGM+ERG GHIV ISSDAGR+VFP LAVYSASK FVE +S+GLR E GTG+KVTT+QPG+ T L+ ++D+EA E G P G +V L P D+A++V++ALT P +VAVNE+LVEPRD+
Sbjct: 90 AGVMYYTLMRNLRTEEWERTVEVNCKGVLNCVGAVLGGMVERGRGHIVTISSDAGRKVFPGLAVYSASKFFVEGLSQGLRLETAGTGIKVTTVQPGNVDTGLLGMSSDREALERYGKPSGARV---------LDPEDVAASVVHALTQPEHVAVNEILVEPRDE 244
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: A0A7W1DHM8_9ACTN (SDR family oxidoreductase n=2 Tax=Rubrobacteraceae bacterium TaxID=2740537 RepID=A0A7W1DHM8_9ACTN) HSP 1 Score: 202 bits (513), Expect = 1.240e-57 Identity = 104/164 (63.41%), Postives = 126/164 (76.83%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVMY+T MKN E+EWERTV+VNCKG + VGAVL GM+ERG GHIV ISSDAGR+VFP LAVYSASK FVEA+S+GLR E GTG+KVTTIQPG+ ATDL+ + D+EA E G P G +V L P D+A++V++AL P +VAVNE+LVEPRD+
Sbjct: 92 AGVMYYTLMKNRREEEWERTVEVNCKGALNCVGAVLPGMLERGRGHIVTISSDAGRKVFPGLAVYSASKFFVEALSQGLRLETAGTGVKVTTIQPGNVATDLISMSGDEEALEEYGQPGGARV---------LDPEDVAASVVHALVQPEHVAVNEILVEPRDE 246
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: UPI0001CBBBDA (dehydrogenase/reductase SDR family member 11-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBBBDA) HSP 1 Score: 201 bits (512), Expect = 1.960e-57 Identity = 104/163 (63.80%), Postives = 124/163 (76.07%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRD 489
AGVMY+T MKNL+ED+WERT+DVNCKGV+ GVGAVL GMI RG GHIVN+SS+AGRR FP LAVYS +K FVEAMS LR+E++GTG+KVTTIQPGD TDL NTDKEA E K ST + LQ +DI AV+YA++ P V VNE+L+EPR+
Sbjct: 95 AGVMYYTLMKNLNEDQWERTIDVNCKGVVNGVGAVLSGMISRGKGHIVNMSSNAGRRAFPGLAVYSGTKFFVEAMSSALRQELIGTGVKVTTIQPGDVKTDLAAENTDKEAIE--------KYDMSSTYD-TLQAADIGRAVVYAVSQPPYVGVNEILIEPRE 248
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: A0A6J4R0T1_9ACTN (Uncharacterized protein n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4R0T1_9ACTN) HSP 1 Score: 201 bits (511), Expect = 2.500e-57 Identity = 105/164 (64.02%), Postives = 128/164 (78.05%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVMY+T MKNL E+EWERTV+VNCKG + VGAVL GM+ERGSGHIV ISSDAGR+VFP LAVYSASK FVEA+S+GLR E GTG+KVTT+QPG+ AT+L +TD+EA EA G GS +VL P D+A++V++AL P +VAVNE+LVEP D+
Sbjct: 93 AGVMYYTMMKNLREEEWERTVEVNCKGSINCVGAVLPGMLERGSGHIVTISSDAGRKVFPGLAVYSASKFFVEALSQGLRLETAGTGVKVTTVQPGNVATNLHSMSTDEEALEAYG---------GSGEARVLDPEDVAASVVHALMQPEHVAVNEILVEPSDE 247
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: A0A2N5KFC4_9ACTN (Oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5KFC4_9ACTN) HSP 1 Score: 199 bits (507), Expect = 9.380e-57 Identity = 103/164 (62.80%), Postives = 125/164 (76.22%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVMY+T M+NL E+EWE+TV+VNCKG + VGAVL GM+ RG GHIV ISSDAGR+VF LAVYSASK FVEA+S+GLR E GTGLKVTTIQPG+ ATDL +TD EA + G P G +V L P D+A++++YAL+ P +VAVNEVLVEPRD+
Sbjct: 92 AGVMYYTLMRNLCEEEWEKTVEVNCKGTLNCVGAVLPGMVSRGRGHIVTISSDAGRKVFAGLAVYSASKFFVEALSQGLRLETAGTGLKVTTIQPGNVATDLAAMSTDGEALKLYGQPTGARV---------LDPEDVAASIVYALSQPEHVAVNEVLVEPRDE 246
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Match: A0A6J4QBM0_9ACTN (3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4QBM0_9ACTN) HSP 1 Score: 199 bits (506), Expect = 1.030e-56 Identity = 104/164 (63.41%), Postives = 124/164 (75.61%), Query Frame = 1
Query: 1 AGVMYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDAGRRVFPALAVYSASKHFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAAEAAGVPIGVKVGTGSTVNQVLQPSDIASAVLYALTAPSNVAVNEVLVEPRDQ 492
AGVM++T MKNL ED+WERTVDVNCKG + +GAVL GMI RG GHIV ISSDAGR+VFP L+ YSASK FVEA+S+GLR E VGTG+KVTTIQPG+ ATDL+ + D EA E G P G +V L P D+A++V++AL P VAVNEVLVEPRD+
Sbjct: 84 AGVMFYTLMKNLQEDDWERTVDVNCKGALNCIGAVLPGMISRGRGHIVTISSDAGRKVFPGLSAYSASKFFVEALSQGLRLETVGTGVKVTTIQPGNVATDLLSLSKDVEALEMYGQPGGARV---------LDPEDVAASVMHALRQPEYVAVNEVLVEPRDE 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6371.14171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6371.14171.1 >prot_H-paniculata_contig6371.14171.1 ID=prot_H-paniculata_contig6371.14171.1|Name=mRNA_H-paniculata_contig6371.14171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp MYFTNMKNLHEDEWERTVDVNCKGVMFGVGAVLGGMIERGSGHIVNISSDback to top mRNA from alignment at H-paniculata_contig6371:812..5795+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6371.14171.1 ID=mRNA_H-paniculata_contig6371.14171.1|Name=mRNA_H-paniculata_contig6371.14171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4984bp|location=Sequence derived from alignment at H-paniculata_contig6371:812..5795+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6371:812..5795+ >mRNA_H-paniculata_contig6371.14171.1 ID=mRNA_H-paniculata_contig6371.14171.1|Name=mRNA_H-paniculata_contig6371.14171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at H-paniculata_contig6371:812..5795+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |