prot_H-paniculata_contig633.14122.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig633.14122.1
Unique Nameprot_H-paniculata_contig633.14122.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length574
Homology
BLAST of mRNA_H-paniculata_contig633.14122.1 vs. uniprot
Match: A0A6H5JGJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ1_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 5.460e-117
Identity = 226/543 (41.62%), Postives = 276/543 (50.83%), Query Frame = 0
Query:  108 RPKVSVKQAMQQWSADSLDLRRLKYKRVYVCKATTLPDVLSEFWSLTADCAQANYQAISDDRDYAAHVLFVIPHCDLLKDYGMMRHLD--------------------------------KVVDFCSGGCTDFGRTVTMQHYHPDFVLPPS---ASSQDGKKERRNHGRAHDSTTVHPTDLARVVNLSRSPFPAFGLTVAGGNAARSDPTQLGDKTGRFRLDLEMLYNSVSGCSTDDDVDAHGSEHGTIPSEPHVVMDKTQKWLAGCAEAL----EGSGGDEAERDSYGRSLNSA----------------------------------GGFVMTSFTTAEEVFSEAWSIVRDLQARVAPAVTNETNIGKSFSA-----------------------------------SKPSCSTSQGQQEAXXXXXXXXXXXXXXXXXRVVRDEPLAATLLVAPRVHPFNAALFENLSLNLAIALKQTPIMDHIEVEVYHPEYVCDSGNIDPIRRSPFPTLLIKHCGLKDQLFEPSGTYRHAVPPIQIPLE 542
            R    +KQA++ W+ +SLDLRR + KRV++CKA TLP+VLSEFWSL A  AQ  Y A++ D DYAAH LFV P C LLK+Y MMRHLD                                KV+DFCSGGC+DFGRTVT+QHYHPDFVLPPS   +SS     +  N G            L+R VN SR+P+P FGLT A G+  RS+P +  DK G  RLDLE++YNSV+G STDD VD+ G   G IPS    V DKT  WL     AL    EG+ G   ER + G    S                                   GG V +   + E++  EA   +   +   AP   +                                             +K +     G Q+                   V   + LA+TLLVAPR+HPFNAA FEN +  LAIALKQ PI+D IEVEVYHPE VCD G ID  RRSP+PTLL+KHCGLKD LFEPSG YRH +PP+++PLE
Sbjct:  110 RQNTLIKQAVEAWAEESLDLRRFQGKRVHICKAETLPEVLSEFWSLAAMMAQEKYSAMAGDHDYAAHALFVAPRCALLKNYAMMRHLDPSLSEEIGTCFFIASSPEGLKAKTSRFVFARDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKG------------LSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKTDKIGHLRLDLELVYNSVAGRSTDDCVDSGGGGRGGIPSSLEEVQDKTLDWLYSLPPALRAGQEGAVGGVEERGAAGDEAVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKLREEALPFLAAAEHEEAPPSPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVEHWTKAATKLKAGAQQDVADEDRGEGAAEAAVGAGVEAKKSLASTLLVAPRLHPFNAAQFENFARTLAIALKQAPIVDRIEVEVYHPELVCDGGVIDLDRRSPYPTLLLKHCGLKDVLFEPSGNYRHVLPPLKLPLE 640          
BLAST of mRNA_H-paniculata_contig633.14122.1 vs. uniprot
Match: D7G0L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L3_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 8.390e-105
Identity = 193/442 (43.67%), Postives = 235/442 (53.17%), Query Frame = 0
Query:  108 RPKVSVKQAMQQWSADSLDLRRLKYKRVYVCKATTLPDVLSEFWSLTADCAQANYQAISDDRDYAAHVLFVIPHCDLLKDYGMMRHLDKVVDFCSGGCTDFGRTVTMQHYHPDFVLPPS---ASSQDGKKERRNHGRAHDSTTVHPTDLARVVNLSRSPFPAFGLTVAGGNAARSDPTQLGDKTGRFRLDLEMLYNSVSGCSTDDDVDAHGSEHGTIPSEPHVVMDKTQKWLAGCAEAL----EGSGGDEAERDSYGRSLNSAGGFVMTSFTTAEEVFSEAWSIVRDLQARVAPAVTNETNIGKSFSASKPSCSTSQGQQEAXXXXXXXXXXXXXXXXXRVVRDEPLAATLLVAPRVHPFNAALFENLSLNLAIALKQTPIMDHIEVEVYHPEYVCDSGNIDPIRRSPFPTLLIKHCGLKDQLFEPSGTYRHAVPPIQIPLE 542
            R    +KQA++ W+ +SLDLRR + KRV++CKA TLP+VLSEFWSL +  AQ  Y A++ DRDYAAH LFV P C LLKDY MMRHLDKV+DFCSGGC+DFGRTVT+QHYHPDFVLPPS   +SS     +  N G            L+R VN SR+P+P FGLT A G+  RS+P +  DK G  RLDLE++YNSV+G STDD VD+HGS HGTIPS P  V DK   WL     AL    EG+ G   ER + G            + +TA  V                        +  S+                                        L  + L +P                                +VYHPE VCD G ID  RRSP+PTLL+KHCGLKD LFEPSG YRH +PP+++PLE
Sbjct:  122 RQNTLIKQAVEAWADESLDLRRFQGKRVHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYAMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKG------------LSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKTDKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKALDWLYSLPPALQAGQEGAEGSVEERGAAGDE----------AVSTAAIVNXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGG-------------------------------------LVTSGLNSPE-------------------------------KVYHPELVCDGGVIDIDRRSPYPTLLLKHCGLKDVLFEPSGNYRHVLPPLKLPLE 473          
BLAST of mRNA_H-paniculata_contig633.14122.1 vs. uniprot
Match: A0A835ZA02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA02_9STRA)

HSP 1 Score: 190 bits (482), Expect = 3.700e-50
Identity = 149/469 (31.77%), Postives = 199/469 (42.43%), Query Frame = 0
Query:  106 GKRPKVSVKQAMQQWSADSLDLRRLKYKRVYVCKATTLPDVLSEFWSLTADCAQANYQAISD-DRDYAAHVLFVIPHCDLLKDYGMMRHLDKVVDFCSGGCTDFGRTVTMQHYHPDFVLPPSASSQDGKKERRNHGRAHDSTTVHPTDLARVVNLSRSPFPAFGLTVAGGNAARSDPTQLGDKTGRFRLDLEMLYNSVSGCSTDDDVDAHGSEH--GTIPSEPHV--VMDKTQKWLAGCAEALEG--SGGDEAERDSY--------GRSLNSA-------------GGFV----------MTSFTTAEEVFSEAWSIVRDLQARVAPAVTNETNI-GKSFSASKPSCSTSQGQQEAXXXXXXXXXXXXXXXXXRVVRDEPLAATLLVAPRVHPFNAALFENLSLNLAIALKQTPIMDHIEVEVYHPEYVCDSGNIDPIRRSPFPTLLIKHCGLKDQLFEPSGTYRHAVP 535
            G  PK  VK AM  W A ++        RV V    TLP VLS+FW+  ADC +A Y+   + D  + A +LF  P+C+LL D  +M  +DK +DFC+G C  FG+TV +Q YHP               ERR                        +PFPAFGL +A G       +   DK  + R+ LE+L NS +  S+ D +   G     G   S P    V+ KT+ W A   E LEG  S G  A             G SL  +             GG+V          ++   T EEV S+ W  V ++ A+ A       N  G S + S                                    P  + L VAPR H FNA  F+     LAI LKQ+PI+D + +E+YHPE + D G +D  RR+P+PT+  KH G K +LF      R A P
Sbjct:   68 GPPPKAEVKAAMVNW-AKAVRPEGFSSSRVVVSTGRTLPAVLSQFWTAVADCVEAKYEEERNGDSGFTAQLLFAAPYCELLSDARIMAQVDKTLDFCAGSCVAFGKTVLLQQYHPQLEGGXXXXXXXXXXERR------------------------APFPAFGLRIAPGPVEAEVVST--DKIAQSRMHLELLLNSAASSSSADTIVPAGKRGYCGYPESVPTAESVLTKTKAWAA---EVLEGARSQGTAAXXXXXXXXXXAPEGLSLMPSTTGVPTRAGQQPLGGWVADLEMVFQYSISGSRTTEEVLSDLWGTVEEVIAKAAETQCRVLNADGTSHTYS------------------------------------PAISALFVAPRFHSFNAEAFKKFGATLAIVLKQSPILDDMTIELYHPEVIQDDGEVDARRRAPYPTIHFKHVGKKAELFPAPRRSRVAFP 470          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig633.14122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JGJ1_9PHAE5.460e-11741.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0L3_ECTSI8.390e-10543.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZA02_9STRA3.700e-5031.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..573
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.742

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig633contigH-paniculata_contig633:331..12544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig633.14122.1mRNA_H-paniculata_contig633.14122.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig633 98..14577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig633.14122.1 ID=prot_H-paniculata_contig633.14122.1|Name=mRNA_H-paniculata_contig633.14122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=574bp
MMNLSPRSGYATLGLLVVALGSICSSGVQAFHQAGWWRGGRRLNHQVAKV
SAAKQQQLDLPHGTCRRRKWELHASAKNKSADPSVPSKKSSSNSSSNSGG
ESGGGGKRPKVSVKQAMQQWSADSLDLRRLKYKRVYVCKATTLPDVLSEF
WSLTADCAQANYQAISDDRDYAAHVLFVIPHCDLLKDYGMMRHLDKVVDF
CSGGCTDFGRTVTMQHYHPDFVLPPSASSQDGKKERRNHGRAHDSTTVHP
TDLARVVNLSRSPFPAFGLTVAGGNAARSDPTQLGDKTGRFRLDLEMLYN
SVSGCSTDDDVDAHGSEHGTIPSEPHVVMDKTQKWLAGCAEALEGSGGDE
AERDSYGRSLNSAGGFVMTSFTTAEEVFSEAWSIVRDLQARVAPAVTNET
NIGKSFSASKPSCSTSQGQQEAHHGGAAAAATGGGAKEERVVRDEPLAAT
LLVAPRVHPFNAALFENLSLNLAIALKQTPIMDHIEVEVYHPEYVCDSGN
IDPIRRSPFPTLLIKHCGLKDQLFEPSGTYRHAVPPIQIPLEALEAAAAT
GDGDELLEDGETATEMSADDVQL*
back to top