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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2489 |
| Cds size | 2172 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6296.14067.1 >prot_H-paniculata_contig6296.14067.1 ID=prot_H-paniculata_contig6296.14067.1|Name=mRNA_H-paniculata_contig6296.14067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=724bp
MEVRKAQAVPNYSSECSKDLTIARAESIGEFATAPHDNDKSWQRQDKGQI
IGGTGKNHARVIVGPAASADRGKPRERHESHEWGRGLGPTVEVDLSDAGR
ASSPPSIAGSAGRVSGGGVVADVEEQGVYGVGGADVVGDEHLERDNRNGI
REKEGGILMFGKTERPDNRGSSDWTPTRGLRGDSNHSRNDDEVEQRWTTE
RDWGDQGSAGGAPKTTNCVATAGTKSTHVMPTEVQEHPPAPSSAIRQAGW
AFATALASAGSGIDGRDTGQRRPWGKEGGSGDRLSSDEDDEDGDDDEEKQ
KGLNGGSTLYVGWRTPAESTQSRPATVRSDHDTSTSYMTQAKAVASRPMA
VPDRTRRPSSFSSSSSSGSLDISSKGKQQQRQQSAHAAVEAPQVQRNDLI
LLPAKTTITSAAGKIQGDHGGGGDIVTRFGSSIESSDDDKNEQNHSGTTQ
AATILSSYQRTPAREPATFAKPGVDPAKPPSEQRAADETAALPSLGADVT
STTNDTTAVTNVMGFDADDDGSAADNLDTRINSIPAAANWNGEARTGARG
PDPGDTILEKGELVGGSSRVKRVDSDGGVRSAGDKEGERVATEVLVSDEA
AVQDFDEDGEDWGENYEDEDAVVQPGMAALGTKSKEEEAEEAMVVERVVI
TDFETASSPASAVGDPSSDDDGAESGAGFKTPKYGLFTLGSGLSQFPRRG
KSGNSDEDITATRAVVTSMADGR* back to topmRNA from alignment at H-paniculata_contig6296:1028..5748- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6296.14067.1 ID=mRNA_H-paniculata_contig6296.14067.1|Name=mRNA_H-paniculata_contig6296.14067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4721bp|location=Sequence derived from alignment at H-paniculata_contig6296:1028..5748- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCACTACTAACGCGGTCGAGATGGAGGTCAGAAAAGCACAAGCGGTGCC
GAATTACTCCAGCGAGTGCTCTAAAGATTTGACGATTGCGCGTGCTGAAT
CCATCGGGGAATTCGCGACGGCTCCGCATGACAACGACAAATCCTGGCAA
CGGCAAGACAAAGGGCAGATCATCGGTGGGACTGGGAAAAACCATGCTCG
AGTGATCGTAGGACCGGCGGCAAGCGCCGACAGAGGGAAGCCACGCGAGC
GGCACGAGTCGCATGAGTGGGGGCGAGGTTTAGGGCCGACGGTGGAAGTT
GACTTGAGCGATGCGGGCCGTGCGAGTTCCCCGCCTTCGATCGCGGGTTC
GGCTGGAAGAGTGTCGGGTGGTGGCGTTGTCGCGGATGTCGAAGAGCAGG
GCGTGTACGGTGTTGGAGGCGCTGATGTTGTTGGTGATGAACACCTGGAG
CGAGATAACAGGAACGGCATACGGGAGAAGGAAGGCGGTATTTTGATGTT
CGGAAAGACGGAACGGCCGGATAATCGAGGGAGCAGCGATTGGACGCCCA
CGCGTGGACTCCGAGGTGATTCGAACCACAGCAGAAATGATGACGAGGTC
GAACAGCGATGGACAACGGAGCGGGACTGGGGTGATCAAGGCTCCGCCGG
CGGTGCACCAAAGACAACAAATTGCGTTGCGACAGCGGGGACTAAATCGA
CCCATGTCATGCCAACGGAAGTACAGGAACACCCGCCTGCACCCTCCTCT
GCTATAAGGCAAGCGGGATGGGCTTTTGCTACAGCTCTCGCCTCCGCGGG
TAGTGGCATTGATGGCCGCGATACGGGCCAACGGCGACCATGGGGCAAGG
AGGGGGGTTCGGGTGACAGACTTTCCTCGGACGAAGATGATGAAGATGGT
GATGACGATGAAGAGAAGCAGAAAGGTAAGGTTATCCTCGTGTTATCGTG
TGTATATTCACGTTCCACATTTTAGCGCCGGAAAAATAGCCTGTGTACTG
CAAGTAGTACCCGCGAACATCGCGCGTTTCAACTGGTGTGTACCTAGTCT
AAACCTCCCCTCCCCTCCTCCTCAGCAATCTTTCCTCATTTTTCGCAAAT
TGCAGGGTTAAATGGTGGCTCGACCTTGTACGTTGGCTGGAGAACCCCGG
CGGAGTCAACCCAATCACGGCCTGCCACGGTTCGGTCGGATCACGATACG
AGCACCAGCTATATGACACAGGCGAAAGCAGTTGCGTCTAGACCAATGGC
AGTTCCTGACCGAACCAGGAGACCTTCCAGCTTCTCGTCATCGTCGTCTT
CGGGTTCTCTTGATATCTCTTCCAAAGGCAAGCAACAGCAGCGGCAGCAG
TCAGCACATGCCGCTGTCGAAGCCCCGCAAGTACAGCGAAACGATTTAAT
ACTGCTGCCGGCGAAGACAACCATCACGTCGGCAGCCGGGAAAATCCAGG
GGGACCACGGAGGCGGCGGTGACATCGTTACGCGATTTGGATCGAGCATA
GAGTCATCGGATGACGATAAAAACGAGCAAAATCACAGTGGTACTACACA
AGCCGCCACCATTTTGTCGTCCTACCAGAGAACACCGGCGAGGGAGCCCG
CAACCTTTGCCAAACCCGGGGTGGATCCTGCAAAGCCCCCTTCAGAGCAG
CGTGCGGCGGATGAAACTGCTGCGCTTCCCTCTCTCGGGGCGGATGTTAC
TAGCACCACCAATGACACCACGGCCGTCACGAACGTCATGGGTTTTGATG
CAGACGACGATGGCAGCGCGGCGGATAACCTTGACACTCGCATAAACTCC
ATTCCAGCGGCCGCGAACTGGAATGGCGAAGCAAGAACCGGAGCGAGAGG
GCCTGATCCAGGCGATACGATTCTTGAGAAGGGAGAGCTTGTGGGTGGTA
GTAGCAGGGTCAAGCGGGTCGATAGTGACGGTGGTGTCCGTAGTGCCGGC
GACAAAGAGGGCGAAAGGGTGGCGACTGAGGTATTAGTGTCAGATGAAGC
TGCCGTCCAAGATTTTGATGAAGACGGTGAGGACTGGGGAGAGAACTATG
AAGATGAGGACGCTGTGGTGCAACCGGGAATGGCAGCGCTGGGGACGAAG
AGTAAGGAGGAGGAGGCTGAAGAAGCGATGGTTGTGGAGAGAGTTGTCAT
CACCGACTTCGAGGTGTGGGGTTTCGTTCGCGTTGTGGTTAATGCAGTTG
TGTCTTAGGGGGATATTTTGAAAAATGCCGGAACAATGGGGGCTGCGGAG
CTGTAATATTTGTTAAACACACATATTCGCCACCAAGAATAACGCAAGTA
AATGTGACTCAAGATATTGCACGCAAACAGTAGCTCAGTCACACGATGTT
GGATTTTACAATTGTTCATGCTCTTCTTTCCGCTCAGTAGTGCGCAGGCA
CTACTTGCGAATTTTCGGATACTATCGTATCGGTGACCATTGACTTTCCC
ATTCCCGCGAACAGTAGCCTGGCTATTTTCTGCTTCGCGTACCACTTGCC
TCAGCACTAGCCTCTTTCTTGATTGCGGCGTCTATTTTTCCTTTATCACA
CGAGCATGGTCGCCATGAAATCACAGTTTGTATACACCAACTATATAGCA
CAATTGTAGACGTGAAACCCCTCCTTATCCGTTTCTTCTCTAAATATTTG
TGACTTAACCTAAAGACCGCCAGCTCGCCCGCAAGTGCTGTCGGTGACCC
CAGTTCGGACGACGATGGGGCTGAGTCCGGGGCGGGGTTCAAAACGCCCA
AGTACGGATTATTCACGCTTGGATCGGGCCTATCGCAGTTCCCTAGGAGG
TACGCGCTTTTTCTCGATTCGGTGAAACTACGGTGCTTGTTGCTGTTGGT
GCCAGTTCGCTGTCGATGAGTGGTACGATGGTTGTAAAGGGATACTCTAT
GGACTTGTTCAACTACTGCAACACTCCTTCCTCGACATTTGCCCTTGTGT
CAGCTTGCTACTGTGTACATTCTGTAACCCCCCAGTCCTTTTTGGATTTG
ACCCCCCCCCCCGGCGCCAATTTTGCTGGTTTGTGGAATGAGTGATTACT
CGGCAGTATAAATTGCATGAGTGGACCTCTAGTCGATCGATTGCTGTGAA
TATGTTTTCTGTTCGTACTTGTAAACGTTTGAAACCGTATTATTGTCATG
TTGCTGGCGATTCTGTCCTATTGTTGGAGTGGTTCTTGGCAAGGGTCGTA
CTGTTAATAGTCATAATAGTTCATCAGTGAATATTGCTGTCCGTGTTTTG
CCCCAGTTCATATATAGGCTTCCTGCTCTTGCTTGAAGGTTTCTCGCTAC
TTGGTTCTCTTTTAGGCTGCAGCATTTTTTCAACCTACCGGATTATGTTG
ATCAAGTCTTGAACTCTCTCATGTCAATCGAACACTGACTGTATATCATC
TCAGTTTATGTTCAGTATATCAAGTGCAGGTGTTTACCCATGTCGTGAAA
TGCCGTATTAGCGGACAAAAAGTTATGCACGAGCAGGGCAGGAATAGGCA
GGGTCATGAAGTTACACCCCCCGAACAAATACCAATAATTGGCGTATTCG
CCTCGAAAAATACATATATTCGCCTAAGTTTCAGAATGAGCTTGTCTATT
TTATACGCTCCGAATCATCCACGACTGCTAGTAATACTCGTAAATCGAAT
AGACGAGGGTGGTTACTCTATTCTTTGTGTATGCTCATTCTGAAACTCAG
GCGAATACGTCTAAATTTCGTTGCGAATACGGCAATTATTCGTACTTGTG
CGGGGGATGTAAAGCTCTTACATCAAATTCAATTCAATCTTCAAATAAGT
TCAGCATGCAACAAAATGTTCAAATATATATATGCAACCATTCACCCATA
CATGATATAAACATACACGAAGATTATTTGACCTCTTGATATGATTTTAT
GGTTTATACAATCTACATATTTTATTGCTTATTACTTCCCTTCGAGGATA
TATAGAGCTCTCTCTCTCTCTCTCTAATGTTGCACCTTAGGCATTTTGTA
TTAGAGTAATAATATTAGTTGTTTTCTCCTGTCTTGTTCTATTCAAATAT
GTCTATATTAGTTAGAACTCTTGGTTTAGTATGGGGGAGAATTTGGTTCC
GGAAGATCACAGTTCATGTAGAGATACGTAGGTATGGGTAGGCAAGCATT
TCGAGAAAGATGCTTCTCTCAGCTTAATCTACCCGGCGCTTTGTTGCAGG
CCGAGGTGAGTATTGAGTACCGAATATTGAATATCAATTATAGTATGTGT
GAGTACATTATGCTAAACCTGTCCATCTTCAACCCCGCCCGCGCATTCCC
CCCTCGCCTCTTTCGGGGATACACACCACGGCTTAATCTACGACAGCAGG
GGGAAATCCGGGAACTCCGACGAGGATATTACTGCGACACGAGCAGTGGT
TACTTCTATGGCGGACGGTCGTTGACAAGAAATATGGTAGCTGCGTTGTT
GCGATTTATGGCACAAGGGAGGTGAAGAGCAATATCGAAATGTATGGTGA
CGGGTGGGAATGGCGGCGCGATGTTAGCGGTGGAACACGAGTTGGGACAG
GAAGTTCGTTGTCCACCTACCAGTGCTCTGTTGTTACAGGTTGTATGCGC
GTAACGGGGGGGAAGTGACCCGAGGAGGTCTGTTTTTGAATTAAACGTTT
TTCATAAGATAGTATGTATGCTATTCACTAGACGACACGTTTTTTGCCGG
AATGTTCGTCTATCCACCTTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig6296:1028..5748- >mRNA_H-paniculata_contig6296.14067.1 ID=mRNA_H-paniculata_contig6296.14067.1|Name=mRNA_H-paniculata_contig6296.14067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4344bp|location=Sequence derived from alignment at H-paniculata_contig6296:1028..5748- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGTCAGAAAAGCACAAGCGGTGCCGAATTACTCCAGCGAGTGCTC
TAAAGATTTGACGATTGCGCGTGCTGAATCCATCGGGGAATTCGCGACGG
CTCCGCATGACAACGACAAATCCTGGCAACGGCAAGACAAAGGGCAGATC
ATCGGTGGGACTGGGAAAAACCATGCTCGAGTGATCGTAGGACCGGCGGC
AAGCGCCGACAGAGGGAAGCCACGCGAGCGGCACGAGTCGCATGAGTGGG
GGCGAGGTTTAGGGCCGACGGTGGAAGTTGACTTGAGCGATGCGGGCCGT
GCGAGTTCCCCGCCTTCGATCGCGGGTTCGGCTGGAAGAGTGTCGGGTGG
TGGCGTTGTCGCGGATGTCGAAGAGCAGGGCGTGTACGGTGTTGGAGGCG
CTGATGTTGTTGGTGATGAACACCTGGAGCGAGATAACAGGAACGGCATA
CGGGAGAAGGAAGGCGGTATTTTGATGTTCGGAAAGACGGAACGGCCGGA
TAATCGAGGGAGCAGCGATTGGACGCCCACGCGTGGACTCCGAGGTGATT
CGAACCACAGCAGAAATGATGACGAGGTCGAACAGCGATGGACAACGGAG
CGGGACTGGGGTGATCAAGGCTCCGCCGGCGGTGCACCAAAGACAACAAA
TTGCGTTGCGACAGCGGGGACTAAATCGACCCATGTCATGCCAACGGAAG
TACAGGAACACCCGCCTGCACCCTCCTCTGCTATAAGGCAAGCGGGATGG
GCTTTTGCTACAGCTCTCGCCTCCGCGGGTAGTGGCATTGATGGCCGCGA
TACGGGCCAACGGCGACCATGGGGCAAGGAGGGGGGTTCGGGTGACAGAC
TTTCCTCGGACGAAGATGATGAAGATGGTGATGACGATGAAGAGAAGCAG
AAAGATGGAGGTCAGAAAAGCACAAGCGGTGCCGAATTACTCCAGCGAGT
GCTCTAAAGATTTGACGATTGCGCGTGCTGAATCCATCGGGGAATTCGCG
ACGGCTCCGCATGACAACGACAAATCCTGGCAACGGCAAGACAAAGGGCA
GATCATCGGTGGGACTGGGAAAAACCATGCTCGAGTGATCGTAGGACCGG
CGGCAAGCGCCGACAGAGGGAAGCCACGCGAGCGGCACGAGTCGCATGAG
TGGGGGCGAGGTTTAGGGCCGACGGTGGAAGTTGACTTGAGCGATGCGGG
CCGTGCGAGTTCCCCGCCTTCGATCGCGGGTTCGGCTGGAAGAGTGTCGG
GTGGTGGCGTTGTCGCGGATGTCGAAGAGCAGGGCGTGTACGGTGTTGGA
GGCGCTGATGTTGTTGGTGATGAACACCTGGAGCGAGATAACAGGAACGG
CATACGGGAGAAGGAAGGCGGTATTTTGATGTTCGGAAAGACGGAACGGC
CGGATAATCGAGGGAGCAGCGATTGGACGCCCACGCGTGGACTCCGAGGT
GATTCGAACCACAGCAGAAATGATGACGAGGTCGAACAGCGATGGACAAC
GGAGCGGGACTGGGGTGATCAAGGCTCCGCCGGCGGTGCACCAAAGACAA
CAAATTGCGTTGCGACAGCGGGGACTAAATCGACCCATGTCATGCCAACG
GAAGTACAGGAACACCCGCCTGCACCCTCCTCTGCTATAAGGCAAGCGGG
ATGGGCTTTTGCTACAGCTCTCGCCTCCGCGGGTAGTGGCATTGATGGCC
GCGATACGGGCCAACGGCGACCATGGGGCAAGGAGGGGGGTTCGGGTGAC
AGACTTTCCTCGGACGAAGATGATGAAGATGGTGATGACGATGAAGAGAA
GCAGAAAGGGTTAAATGGTGGCTCGACCTTGTACGTTGGCTGGAGAACCC
CGGCGGAGTCAACCCAATCACGGCCTGCCACGGTTCGGTCGGATCACGAT
ACGAGCACCAGCTATATGACACAGGCGAAAGCAGTTGCGTCTAGACCAAT
GGCAGTTCCTGACCGAACCAGGAGACCTTCCAGCTTCTCGTCATCGTCGT
CTTCGGGTTCTCTTGATATCTCTTCCAAAGGCAAGCAACAGCAGCGGCAG
CAGTCAGCACATGCCGCTGTCGAAGCCCCGCAAGTACAGCGAAACGATTT
AATACTGCTGCCGGCGAAGACAACCATCACGTCGGCAGCCGGGAAAATCC
AGGGGGACCACGGAGGCGGCGGTGACATCGTTACGCGATTTGGATCGAGC
ATAGAGTCATCGGATGACGATAAAAACGAGCAAAATCACAGTGGTACTAC
ACAAGCCGCCACCATTTTGTCGTCCTACCAGAGAACACCGGCGAGGGAGC
CCGCAACCTTTGCCAAACCCGGGGTGGATCCTGCAAAGCCCCCTTCAGAG
CAGCGTGCGGCGGATGAAACTGCTGCGCTTCCCTCTCTCGGGGCGGATGT
TACTAGCACCACCAATGACACCACGGCCGTCACGAACGTCATGGGTTTTG
ATGCAGACGACGATGGCAGCGCGGCGGATAACCTTGACACTCGCATAAAC
TCCATTCCAGCGGCCGCGAACTGGAATGGCGAAGCAAGAACCGGAGCGAG
AGGGCCTGATCCAGGCGATACGATTCTTGAGAAGGGAGAGCTTGTGGGTG
GTAGTAGCAGGGTCAAGCGGGTCGATAGTGACGGTGGTGTCCGTAGTGCC
GGCGACAAAGAGGGCGAAAGGGTGGCGACTGAGGTATTAGTGTCAGATGA
AGCTGCCGTCCAAGATTTTGATGAAGACGGTGAGGACTGGGGAGAGAACT
ATGAAGATGAGGACGCTGTGGTGCAACCGGGAATGGCAGCGCTGGGGACG
AAGAGTAAGGAGGAGGAGGCTGAAGAAGCGATGGTTGTGGAGAGAGTTGT
CATCACCGACTTCGAGGGTTAAATGGTGGCTCGACCTTGTACGTTGGCTG
GAGAACCCCGGCGGAGTCAACCCAATCACGGCCTGCCACGGTTCGGTCGG
ATCACGATACGAGCACCAGCTATATGACACAGGCGAAAGCAGTTGCGTCT
AGACCAATGGCAGTTCCTGACCGAACCAGGAGACCTTCCAGCTTCTCGTC
ATCGTCGTCTTCGGGTTCTCTTGATATCTCTTCCAAAGGCAAGCAACAGC
AGCGGCAGCAGTCAGCACATGCCGCTGTCGAAGCCCCGCAAGTACAGCGA
AACGATTTAATACTGCTGCCGGCGAAGACAACCATCACGTCGGCAGCCGG
GAAAATCCAGGGGGACCACGGAGGCGGCGGTGACATCGTTACGCGATTTG
GATCGAGCATAGAGTCATCGGATGACGATAAAAACGAGCAAAATCACAGT
GGTACTACACAAGCCGCCACCATTTTGTCGTCCTACCAGAGAACACCGGC
GAGGGAGCCCGCAACCTTTGCCAAACCCGGGGTGGATCCTGCAAAGCCCC
CTTCAGAGCAGCGTGCGGCGGATGAAACTGCTGCGCTTCCCTCTCTCGGG
GCGGATGTTACTAGCACCACCAATGACACCACGGCCGTCACGAACGTCAT
GGGTTTTGATGCAGACGACGATGGCAGCGCGGCGGATAACCTTGACACTC
GCATAAACTCCATTCCAGCGGCCGCGAACTGGAATGGCGAAGCAAGAACC
GGAGCGAGAGGGCCTGATCCAGGCGATACGATTCTTGAGAAGGGAGAGCT
TGTGGGTGGTAGTAGCAGGGTCAAGCGGGTCGATAGTGACGGTGGTGTCC
GTAGTGCCGGCGACAAAGAGGGCGAAAGGGTGGCGACTGAGGTATTAGTG
TCAGATGAAGCTGCCGTCCAAGATTTTGATGAAGACGGTGAGGACTGGGG
AGAGAACTATGAAGATGAGGACGCTGTGGTGCAACCGGGAATGGCAGCGC
TGGGGACGAAGAGTAAGGAGGAGGAGGCTGAAGAAGCGATGGTTGTGGAG
AGAGTTGTCATCACCGACTTCGAGACCGCCAGCTCGCCCGCAAGTGCTGT
CGGTGACCCCAGTTCGGACGACGATGGGGCTGAGTCCGGGGCGGGGTTCA
AAACGCCCAAGTACGGATTATTCACGCTTGGATCGGGCCTATCGCAGTTC
CCTAGGAGACCGCCAGCTCGCCCGCAAGTGCTGTCGGTGACCCCAGTTCG
GACGACGATGGGGCTGAGTCCGGGGCGGGGTTCAAAACGCCCAAGTACGG
ATTATTCACGCTTGGATCGGGCCTATCGCAGTTCCCTAGGAGGGGGAAAT
CCGGGAACTCCGACGAGGATATTACTGCGACACGAGCAGTGGTTACTTCT
ATGGCGGACGGTCGTTGAGGGGAAATCCGGGAACTCCGACGAGGATATTA
CTGCGACACGAGCAGTGGTTACTTCTATGGCGGACGGTCGTTGA back to top
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