prot_H-paniculata_contig6286.14050.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig6286.14050.1
Unique Name	prot_H-paniculata_contig6286.14050.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	111

Homology

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: A0A0L0FN09_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FN09_9EUKA)

HSP 1 Score: 130 bits (327), Expect = 2.690e-34
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 0

Query:    2 CNTLTGSCACPGLWTGPTCSRAVGDYSIPSSSLGWYKPPLGVTWEWQ----IDALYDVELYDIDYSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLGGVVSLS 110
            CN +TG C C   W GP C R +GD SIP    GWYKP  G+TW+WQ    ID  YDV+LYDID+     V+ +L + G+KVMCY SAG++E +R+D  ++PA+V GG++S +
Sbjct:   36 CNVITGECMCRDRWIGPDCGRKIGDLSIPKQKGGWYKPDKGITWQWQLQGEIDRTYDVDLYDIDFDTSPQVIKELHKDGRKVMCYFSAGSWEMWRKDADMYPASVKGGILSFA 148

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: A0A0L0FQP7_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQP7_9EUKA)

HSP 1 Score: 113 bits (282), Expect = 1.190e-28
Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 0

Query:    2 CNTLTGSCACPGLWTGPTCSRAVGDYSIPSSSLGWYKPPLGVTWEWQ----IDALYDVELYDIDYSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLGG 105
            C+  +G C+C   WTG  C R +GD+ IP  +  WYKP  G+TW+WQ    ID  +DV+LYD+D    A+V++ L   G+KVMCY SAG++E+FR D A    ++ GG
Sbjct:   21 CDPFSGRCSCNSRWTGLYCERIIGDFRIPEHNKTWYKPKAGITWQWQLQDEIDQSFDVDLYDVDVDTSATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGG 128

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: A0A0L0FCU9_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCU9_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 7.160e-27
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 0

Query:    2 CNTLTGSCACPGLWTGPTCSRAVGDYSIPSSSLGWYKPPLGVTWEWQ----IDALYDVELYDIDYSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLGG 105
            C+  +G C+C   W G  C R +GD+ IP  +  WYKP  G+TW+WQ    ID  +DV+LYD+D    A+V++ L   G+KVMCY SAG++E+FR D A    ++ GG
Sbjct:   84 CDPFSGRCSCNSRWIGSYCERIIGDFRIPEHNKTWYKPKAGITWQWQLQDEIDQSFDVDLYDVDVDTSATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGG 191

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: A0A0L0FQ33_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQ33_9EUKA)

HSP 1 Score: 110 bits (275), Expect = 6.760e-26
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0

Query:    2 CNTLTGSCACPGLWTGPTCSRAVGDYSIPSS--SLGWYKPPLGVTWEWQ----IDALYDVELYDIDYSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLGG 105
            C+ + G C C   +TG  C R +GD SIP++  ++  ++P  G+ W+WQ    ID  +DV LYD+D   PAS +A L   G+KVMCY SAG+YED+R DRALFP  + GG
Sbjct:  429 CDPINGKCTCDSRYTGTECGRIMGDISIPANLENVERFRPQKGIRWQWQLQDTIDESHDVPLYDVDIDTPASTIASLHAAGRKVMCYFSAGSYEDWRMDRALFPEFIKGG 538

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: A0A0L0FMI3_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FMI3_9EUKA)

HSP 1 Score: 109 bits (273), Expect = 1.040e-25
Identity = 53/110 (48.18%), Postives = 72/110 (65.45%), Query Frame = 0

Query:    2 CNTLTGSCACPGLWTGPTCSRAVGDYSIPSSS--LGWYKPPLGVTWEWQ----IDALYDVELYDIDYSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLGG 105
            C+ +TG C C   +TG +CSR +GD SIP++S  +  YKP  G+ W+WQ    ID  +DV LYDID+  P S +A L   G++VMCY SAG+ E +R D+ LFPA + GG
Sbjct:  242 CDPITGKCICDNRFTGTSCSRVIGDISIPTNSETVDRYKPKKGIRWQWQLQDTIDESHDVPLYDIDFDTPDSTIASLHAAGRRVMCYFSAGSTEKWRIDQELFPAFIQGG 351

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: W1RUX7_9GAMM (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Marinomonas profundimaris TaxID=1208321 RepID=W1RUX7_9GAMM)

HSP 1 Score: 87.8 bits (216), Expect = 9.340e-19
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 0

Query:   30 PSSSLGWYKPPLGVTWEWQIDAL----YDVELYDID-YSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLGGVVS 108
            P  +  WY+PP+ VTW+WQ+D +    YDV++YDID +  PA ++  L   GKKV+CY SAG+YED+R D A+F A  LG  +S
Sbjct:   21 PLYAADWYRPPVSVTWQWQLDGVVNEGYDVDVYDIDLFDSPADLIERLHASGKKVICYFSAGSYEDWRPDAAVFAAKDLGKTLS 104

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: A0A354EGS3_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A354EGS3_9DELT)

HSP 1 Score: 86.3 bits (212), Expect = 4.300e-18
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 0

Query:   36 WYKPPLGVTWEWQIDALYD----VELYDIDYSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLG 104
            W+KP  G +W+WQ+    D    V +YDIDY  PASV++ L  +GK V+CY+SAG++EDFR D  L+PA VLG
Sbjct:   48 WWKPRPGTSWQWQLSGAIDTSLGVAMYDIDYETPASVISQLHAQGKTVICYMSAGSWEDFRSDAGLYPAAVLG 120

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: A0A1D3DW53_9ACTN (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Streptomyces thermolilacinus SPC6 TaxID=1306406 RepID=A0A1D3DW53_9ACTN)

HSP 1 Score: 83.6 bits (205), Expect = 4.790e-17
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 0

Query:   30 PSSSLGWYKPPLGVTWEWQI----DALYDVELYDID-YSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLG 104
            P +S   ++P  G  W+WQ+    D   DV +YDID +  PAS VADL R+G+KV+CY+S G +EDFR D + FPA+VLG
Sbjct:   48 PGASAAPWRPARGTAWQWQLTGRLDPTVDVPVYDIDGFDQPASAVADLHRRGRKVICYLSTGAWEDFRPDASRFPASVLG 127

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: UPI0011EDF13E (endo alpha-1,4 polygalactosaminidase n=1 Tax=Streptomyces sp. TRM49041 TaxID=2603216 RepID=UPI0011EDF13E)

HSP 1 Score: 83.2 bits (204), Expect = 5.920e-17
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0

Query:   35 GWYKPPLGVTWEWQI----DALYDVELYDID-YSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLG 104
            G ++P  GV W+WQ+    D   DV +YDID + +PAS VADL R+G+KV+CY+S G +EDFR D A FP  VLG
Sbjct:   44 GVWRPEPGVAWQWQLSGGLDPAVDVPVYDIDGFDHPASAVADLHRRGRKVICYLSTGAWEDFRPDAAKFPKAVLG 118

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BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Match: A0A7W7TV61_9ACTN (Glyco_hydro_114 domain-containing protein n=1 Tax=Streptomyces nymphaeiformis TaxID=2663842 RepID=A0A7W7TV61_9ACTN)

HSP 1 Score: 82.4 bits (202), Expect = 9.590e-17
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 0

Query:   30 PSSSLGWYKPPLGVTWEWQI----DALYDVELYDID-YSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPATVLG 104
            P ++   ++P  G+TW+WQ+    D   DV +YDID + +PAS VADL R+G+KV+CY+S G +E FR D   FPA VLG
Sbjct:   26 PKTTADRWRPAPGLTWQWQLSGTLDPAVDVPVYDIDGFDHPASTVADLHRRGRKVICYVSTGAWEKFRPDAGSFPAAVLG 105

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6286.14050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0L0FN09_9EUKA	2.690e-34	49.56	EGF-like domain-containing protein n=1 Tax=Sphaero...	[more]
A0A0L0FQP7_9EUKA	1.190e-28	45.37	EGF-like domain-containing protein (Fragment) n=1 ...	[more]
A0A0L0FCU9_9EUKA	7.160e-27	44.44	EGF-like domain-containing protein (Fragment) n=1 ...	[more]
A0A0L0FQ33_9EUKA	6.760e-26	47.27	EGF-like domain-containing protein n=1 Tax=Sphaero...	[more]
A0A0L0FMI3_9EUKA	1.040e-25	48.18	EGF-like domain-containing protein n=1 Tax=Sphaero...	[more]
W1RUX7_9GAMM	9.340e-19	48.81	Endo alpha-1,4 polygalactosaminidase n=1 Tax=Marin...	[more]
A0A354EGS3_9DELT	4.300e-18	52.05	Endo alpha-1,4 polygalactosaminidase n=1 Tax=Desul...	[more]
A0A1D3DW53_9ACTN	4.790e-17	50.00	Endo alpha-1,4 polygalactosaminidase n=1 Tax=Strep...	[more]
UPI0011EDF13E	5.920e-17	53.33	endo alpha-1,4 polygalactosaminidase n=1 Tax=Strep...	[more]
A0A7W7TV61_9ACTN	9.590e-17	48.75	Glyco_hydro_114 domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004352	Glycoside-hydrolase family GH114, TIM-barrel domain	PFAM	PF03537	Glyco_hydro_114	coord: 44..104 e-value: 8.8E-15 score: 54.6
None	No IPR available	PANTHER	PTHR35273	FAMILY NOT NAMED	coord: 35..103
None	No IPR available	PANTHER	PTHR35273:SF3		coord: 35..103
IPR013032	EGF-like, conserved site	PROSITE	PS00022	EGF_1	coord: 9..20
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 40..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6286	contig	H-paniculata_contig6286:15..958 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6286.14050.1	mRNA_H-paniculata_contig6286.14050.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig6286 15..961 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig6286.14050.1 ID=prot_H-paniculata_contig6286.14050.1|Name=mRNA_H-paniculata_contig6286.14050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MCNTLTGSCACPGLWTGPTCSRAVGDYSIPSSSLGWYKPPLGVTWEWQID
ALYDVELYDIDYSYPASVVADLKRKGKKVMCYISAGTYEDFREDRALFPA
TVLGGVVSLS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004352	GH114_TIM-barrel
IPR013032	EGF-like_CS
IPR017853	Glycoside_hydrolase_SF