prot_H-paniculata_contig62809.14045.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62809.14045.1
Unique Nameprot_H-paniculata_contig62809.14045.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length81
Homology
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A834W4R7_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W4R7_9FABA)

HSP 1 Score: 54.3 bits (129), Expect = 7.860e-7
Identity = 29/78 (37.18%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    2 WVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELSFNLFSLHK 79
            W +DSGA+NH+TNDLS +  +++P  G + V + NG  L +  +G  +LI +S T      ++ ++P++S NL S+ K
Sbjct:   64 WFADSGATNHLTNDLSNLQ-VKQPYDGGEQVHIANGSGLAITHIGNSELISNSKTF--RLNQILHVPDVSKNLLSISK 138          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A5N5G4I9_9ROSA (Integrase catalytic domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5G4I9_9ROSA)

HSP 1 Score: 54.3 bits (129), Expect = 1.200e-6
Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = 0
Query:    1 MWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELSFNLFSLHKM 80
            +W++DSGA+NHMT DLS +  L  P      V   NG  L V  VG    + H+         V Y+P+LS NL S+H+M
Sbjct:  300 LWLADSGATNHMTTDLSNLT-LASPYPTNKTVQTANGEGLRVSHVGST--VIHTPVHPIQLNSVLYVPKLSQNLLSVHRM 376          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A5N5GW54_9ROSA (Integrase catalytic domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5GW54_9ROSA)

HSP 1 Score: 52.8 bits (125), Expect = 4.190e-6
Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = 0
Query:    1 MWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELSFNLFSLHKM 80
            MW++DSGA+NHMT DLS +  L  P    + V   NG  L +  +G    I  +         V Y+P LS NL S+HK+
Sbjct:  361 MWITDSGATNHMTADLSNL-SLASPYPTHETVQTANGEGLPISHIGSS--IIRTPMHPLKLNSVLYVPRLSSNLLSVHKI 437          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A5N5K0C6_9ROSI (Uncharacterized protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5K0C6_9ROSI)

HSP 1 Score: 52.0 bits (123), Expect = 7.510e-6
Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 0
Query:    2 WVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELSFNLFSLHKMQ 81
            W+SDSGASNH+T+DLS M D      G+D V +GNG  L +   G   +   S+T   A     + P ++ NL S+++ +
Sbjct:  327 WISDSGASNHITSDLSNM-DAHNEYHGKDHVAVGNGAGLTIANTGSSKITCGSSTF--ALKNTLHCPSIAANLLSIYQFK 403          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A5N5J6G7_9ROSI (Uncharacterized protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5J6G7_9ROSI)

HSP 1 Score: 52.0 bits (123), Expect = 7.660e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    2 WVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELSFNLFSLHK 79
            W+SDSGASNH+T+DLS M D      G+D V +GNG  L +   G   +   S+T   A   + + P ++ NL S+++
Sbjct:  331 WISDSGASNHITSDLSNM-DAHNEYHGKDHVDVGNGAGLTIANTGSSKITCGSSTF--ALKNILHCPSIAANLLSIYQ 405          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A5N6NBX7_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NBX7_9ASTR)

HSP 1 Score: 52.0 bits (123), Expect = 7.890e-6
Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    2 WVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLE-VSYLPELSFNLFSLHKM 80
            W+ D+GASNH+TNDLS +  L  P  G D +++GNG +L +  +G   ++    ++VP  L+ V  +P +S N+ S+ ++
Sbjct:  636 WLFDTGASNHVTNDLS-VLSLHNPYDGTDDLIIGNGSSLPITHIGSTTILI---SNVPVHLQHVLCVPLISRNIISISRL 711          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A151SCF9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SCF9_CAJCA)

HSP 1 Score: 51.6 bits (122), Expect = 8.550e-6
Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    1 MWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELSFNLFSLHK 79
            MW  DSGASNH+TND+S +   ++   G+  V++G+G +L++  +G   +    +    +   + Y+P +S NL S+ K
Sbjct:   13 MWYPDSGASNHLTNDISYL-STKQEYQGKQRVLVGDGNSLLISHIGHSKMHTAQSNITFSLPNIMYIPNISKNLLSISK 90          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A8J5F994_ZINOF (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F994_ZINOF)

HSP 1 Score: 51.6 bits (122), Expect = 1.070e-5
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 0
Query:    1 MWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELSFNLFSLHKM 80
            +WV DSGA++HM+N L+ +YD   P +   +V + NG    V   GK+ L+  +        EV Y+P   F L S+HK+
Sbjct:  378 VWVIDSGATDHMSNKLTHVYDFH-PFSKPSLVSVANGKGAHVQGKGKIKLVSDTIES-----EVLYVPSFPFQLLSVHKL 451          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A6D2JUM8_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JUM8_9BRAS)

HSP 1 Score: 51.2 bits (121), Expect = 1.400e-5
Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    2 WVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATL-EVSYLPELSFNLFSLHKM 80
            WV DSGA++H+T DLS +  L +P  G + V + +G  L +   G   L    T   P TL +V Y+P+L  NL S++++
Sbjct:  115 WVMDSGATHHLTTDLSNL-SLHQPYLGGEEVTIADGTNLHISHTGSSQL---PTLSKPLTLTDVLYVPDLKKNLISVYRL 190          
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Match: A0A2N9G9X8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G9X8_FAGSY)

HSP 1 Score: 51.2 bits (121), Expect = 1.460e-5
Identity = 27/78 (34.62%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    2 WVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELSFNLFSLHK 79
            W+SD+GA+NH T D+S + D  +   G + V +GNG +L ++  G   L  ++++ +     V ++P +S NL S+HK
Sbjct:  310 WISDTGATNHFTPDISHIPDCHE-YRGNEQVTVGNGQSLPINHTGNSQL--YASSHLFKLRHVLHVPSMSSNLLSVHK 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62809.14045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A834W4R7_9FABA7.860e-737.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N5G4I9_9ROSA1.200e-640.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N5GW54_9ROSA4.190e-638.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N5K0C6_9ROSI7.510e-637.50Uncharacterized protein n=1 Tax=Salix brachista Ta... [more]
A0A5N5J6G7_9ROSI7.660e-638.46Uncharacterized protein n=1 Tax=Salix brachista Ta... [more]
A0A5N6NBX7_9ASTR7.890e-636.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A151SCF9_CAJCA8.550e-632.91Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J5F994_ZINOF1.070e-536.25Uncharacterized protein n=3 Tax=Zingiber officinal... [more]
A0A6D2JUM8_9BRAS1.400e-537.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9G9X8_FAGSY1.460e-534.62Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62809contigH-paniculata_contig62809:618..860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62809.14045.1mRNA_H-paniculata_contig62809.14045.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62809 600..860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62809.14045.1 ID=prot_H-paniculata_contig62809.14045.1|Name=mRNA_H-paniculata_contig62809.14045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp
MWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDL
IFHSTTDVPATLEVSYLPELSFNLFSLHKMQ
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