prot_H-paniculata_contig6272.14034.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6272.14034.1
Unique Nameprot_H-paniculata_contig6272.14034.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length249
Homology
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BLAST of mRNA_H-paniculata_contig6272.14034.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 6.910e-26
Identity = 60/72 (83.33%), Postives = 63/72 (87.50%), Query Frame = 0 
Query:  143 MTTFLERHYLTTIHSTIVSQEDQEKDYGLAVNAQDLIHFDSRLGYLVLHRPDLLLGLMREALDLVQSRIVAQ 214
            MTTFLER YL TIH TIVS +DQEKDY LAVNAQDLIHFDSRL YLVLHRPDLLL LMREAL  VQ+RIVA+
Sbjct:    1 MTTFLERRYLATIHRTIVSAQDQEKDYALAVNAQDLIHFDSRLAYLVLHRPDLLLELMREALGEVQARIVAE 72
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6272.14034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM73_ECTSI6.910e-2683.33MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6272contigH-paniculata_contig6272:5167..9496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6272.14034.1mRNA_H-paniculata_contig6272.14034.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6272 5167..9498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6272.14034.1 ID=prot_H-paniculata_contig6272.14034.1|Name=mRNA_H-paniculata_contig6272.14034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp
LCLPRLPDLYTPIAPSSWQHIIPRRDRSHSEDQYPSEDSDNAGGTSNPSG
YNSNASQGPASQEPEINRSGHNRGGRVVEGRDMQRGGGGGVPIGRGGGYG
RGLLRVRRPRGTTRGPRGGGQRAEDLKTYNPKVIGPDEYVGEMTTFLERH
YLTTIHSTIVSQEDQEKDYGLAVNAQDLIHFDSRLGYLVLHRPDLLLGLM
REALDLVQSRIVAQAEEIWASRSRFGSSGSGGGGRSFAANGGDIPNGGE
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