prot_H-paniculata_contig6224.13974.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6224.13974.1
Unique Nameprot_H-paniculata_contig6224.13974.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A6H5L4W0_9PHAE (SMC_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4W0_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 4.740e-68
Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 0
Query:    1 MDELTEFTQAVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            ++++T   +AVERFGDV+DRLKASGQTFEQSKQNAAGA  KFNE KQ RYDTFMQAY  VS NL+TIYKDLT+S+KHPLGG AFLSLD+ EEPYLGG+K+NAMPPMKRFRDMEQLSGGEKTVAAL LLFAIH
Sbjct:    8 INQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQLRYDTFMQAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIH 139          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: D8LRP2_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP2_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 9.710e-62
Identity = 107/132 (81.06%), Postives = 120/132 (90.91%), Query Frame = 0
Query:    1 MDELTEFTQAVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            ++++T   +AVERFGDV+DRLKASGQTFEQSKQNAAGA  KFNE KQ+RYDTFMQAY  VS NL+TIYKDLT+S+KHPLGG AFLSLD+ EEPYLGG+K+NAMPPMKRFRDMEQLSGGEKTVAAL LLFAIH
Sbjct: 1085 INQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRYDTFMQAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIH 1216          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A7S2AZM0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZM0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.880e-48
Identity = 83/124 (66.94%), Postives = 95/124 (76.61%), Query Frame = 0
Query:    9 QAVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            +A ERF DV  RLK+S   +E SK  A  A   FNE K KR++ F   + H+S  L TIY+DLTKS+KHPLGG A+LSLDD EEPY GG+KYN MPPMKRFRDM+QLSGGEKTVAALALLFAIH
Sbjct:  112 KAFERFDDVTTRLKSSLAEYEISKDEARDAAASFNEVKSKRHELFTACFEHISKELKTIYRDLTKSSKHPLGGNAYLSLDDTEEPYAGGIKYNTMPPMKRFRDMDQLSGGEKTVAALALLFAIH 235          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A7S3YCQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCQ0_HETAK)

HSP 1 Score: 164 bits (414), Expect = 6.580e-47
Identity = 76/124 (61.29%), Postives = 100/124 (80.65%), Query Frame = 0
Query:    9 QAVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            +A E+F ++ DRLK SG+ F  +K NA  +   FN+ K+KR+  FMQ + H+   L++ Y+DLTKS+KHPLGGTA+L+LDD EEPYL G+K+NAMPPMKRFRDMEQLSGGE+TVA+LALLF++H
Sbjct:  158 KAFEKFDNLTDRLKDSGKDFSNAKDNAQASALAFNKIKEKRHTAFMQCFNHIKDTLNSTYRDLTKSSKHPLGGTAYLTLDDPEEPYLAGVKFNAMPPMKRFRDMEQLSGGERTVASLALLFSVH 281          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A8J9TE18_PHATR (Hypothetical protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TE18_PHATR)

HSP 1 Score: 158 bits (400), Expect = 1.200e-46
Identity = 78/123 (63.41%), Postives = 92/123 (74.80%), Query Frame = 0
Query:   10 AVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            A E F  + DRLK S   +E+SK+ +A A   F   K KR   F +A+ H+   L TIY D+TKS+KHPLGG A+LSLDD EEPY GG+K+NAMPPMKRFRDMEQLSGGEKTVAAL+LLFAIH
Sbjct:    1 ASEAFSTITDRLKGSSSDYEKSKEKSAKAAQAFQRVKAKRAKLFNEAFNHIDEALKTIYTDMTKSSKHPLGGNAYLSLDDAEEPYKGGIKFNAMPPMKRFRDMEQLSGGEKTVAALSLLFAIH 123          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A8H7Q8H5_9FUNG (SMC hinge domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q8H5_9FUNG)

HSP 1 Score: 169 bits (428), Expect = 1.630e-46
Identity = 82/132 (62.12%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    1 MDELTEFTQAVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            +D++    +AV+R   V +RLK +   FE++++ A  A  KFN  KQKRY+ FM AY H+S  +D +YKDLTKS  HPLGGTA+LSL+D EEPYL G++Y+AMPPMKRFRDMEQLSGGEKT+AALALLFAIH
Sbjct:  508 LDKMAPNLKAVDRLEGVENRLKDTEDQFEKARKTAKRAKEKFNTVKQKRYNLFMDAYNHISEKIDQVYKDLTKSANHPLGGTAYLSLEDNEEPYLEGIRYHAMPPMKRFRDMEQLSGGEKTMAALALLFAIH 639          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A7S2RI11_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RI11_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.090e-46
Identity = 83/124 (66.94%), Postives = 100/124 (80.65%), Query Frame = 0
Query:    9 QAVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            +A ERF DV+ R KAS + F+Q++++A  A   FN+ KQKR+D FM  + HV+  L TIY+DLTK   HPLGG A+LSLDD EEP+LGG+KYNAMPP+KRFRDMEQLSGGEKTVAALALLFAIH
Sbjct:  797 KATERFEDVSVRHKASTEEFDQARESARDAASLFNDVKQKRHDAFMACFNHVAHELQTIYQDLTKDPNHPLGGNAYLSLDDSEEPFLGGIKYNAMPPLKRFRDMEQLSGGEKTVAALALLFAIH 920          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A7S2V1Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Q0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.540e-45
Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 0
Query:   44 EAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            E KQKR+D FM+ + HVS NL  IYKDLTKSTKHPLGG A+LSLDDQEEP+ GG+K+NAMPPMKRFRDMEQLSGGEKTVAALALLFAIH
Sbjct:    1 EVKQKRHDLFMECFNHVSENLSEIYKDLTKSTKHPLGGNAYLSLDDQEEPFHGGVKFNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 89          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A7S0ZCB7_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCB7_9RHOD)

HSP 1 Score: 150 bits (378), Expect = 2.410e-44
Identity = 70/117 (59.83%), Postives = 93/117 (79.49%), Query Frame = 0
Query:   16 DVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            DV  R++ + + FE +++ AA AT ++   +QKRY+ FM  + HV+  +D++YK LTKST +P+GGTA+LSL+ QEEPYL G+KYNAMPP KRFRDM+QLSGGE+TVAALALLFAI 
Sbjct:    1 DVQHRVQEANEYFESARERAANATREYEAVRQKRYERFMGCFQHVADTIDSVYKQLTKSTAYPMGGTAYLSLESQEEPYLAGIKYNAMPPTKRFRDMDQLSGGERTVAALALLFAIQ 117          
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Match: A0A1Y1YY57_9FUNG (Structural maintenance of chromosomes protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YY57_9FUNG)

HSP 1 Score: 162 bits (411), Expect = 8.020e-44
Identity = 79/132 (59.85%), Postives = 101/132 (76.52%), Query Frame = 0
Query:    1 MDELTEFTQAVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRYDTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 132
            ++ L    +  +R GDV +RL+++ + FE++++ A  A   FN  KQ+RY  F +AY H++  +D IYKDLTKS   PLGGTA+LSL+D EEPYL G+KY+AMPPMKRFRDMEQLSGGEKTVAALALLFAIH
Sbjct:  988 IERLAPNLKVFDRMGDVQNRLRSTEEEFEEARREAKDAKEMFNSIKQQRYQKFYKAYSHIAEKIDQIYKDLTKSKTFPLGGTAYLSLEDSEEPYLDGVKYHAMPPMKRFRDMEQLSGGEKTVAALALLFAIH 1119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6224.13974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4W0_9PHAE4.740e-6881.06SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LRP2_ECTSI9.710e-6281.06Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2AZM0_9STRA3.880e-4866.94Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3YCQ0_HETAK6.580e-4761.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J9TE18_PHATR1.200e-4663.41Hypothetical protein (Fragment) n=3 Tax=Phaeodacty... [more]
A0A8H7Q8H5_9FUNG1.630e-4662.12SMC hinge domain-containing protein n=1 Tax=Umbelo... [more]
A0A7S2RI11_9STRA2.090e-4666.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2V1Q0_9STRA4.540e-4582.02Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0ZCB7_9RHOD2.410e-4459.83Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A1Y1YY57_9FUNG8.020e-4459.85Structural maintenance of chromosomes protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..133
e-value: 7.9E-23
score: 83.6
NoneNo IPR availablePANTHERPTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERcoord: 9..132
IPR028468Structural maintenance of chromosomes protein 1PANTHERPTHR18937:SF12STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEINcoord: 9..132
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6224contigH-paniculata_contig6224:9794..12593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6224.13974.1mRNA_H-paniculata_contig6224.13974.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6224 9794..12593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6224.13974.1 ID=prot_H-paniculata_contig6224.13974.1|Name=mRNA_H-paniculata_contig6224.13974.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MDELTEFTQAVERFGDVNDRLKASGQTFEQSKQNAAGATHKFNEAKQKRY
DTFMQAYGHVSANLDTIYKDLTKSTKHPLGGTAFLSLDDQEEPYLGGLKY
NAMPPMKRFRDMEQLSGGEKTVAALALLFAIHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028468Smc1
IPR027417P-loop_NTPase