prot_H-paniculata_contig6213.13958.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6213.13958.1
Unique Nameprot_H-paniculata_contig6213.13958.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length498
Homology
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BLAST of mRNA_H-paniculata_contig6213.13958.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 2.160e-17
Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 0 
Query:    1 MVNPLISKTDIIARVAELSHGKKHLFFALVSREWRRAWGKRLKVTKAVTADTSASQLQHCFDCGLTPCETICHEAARLGLLEVLQTARANGCGWGTRT 98
            M   L +  DI++ V E     ++LFFA VSR WR  WGKR  VTKA+TADTS SQL   F+CGL     +C   A LG L++L+ ARA GC W   T
Sbjct:    1 MEKQLFAAVDIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCPWNENT 98
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BLAST of mRNA_H-paniculata_contig6213.13958.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.910e-15
Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0 
Query:    1 MVNPLISKTDIIARVAELSHGKKHLFFALVSREWRRAWGKRLKVTKAVTADTSASQLQHCFDCGLTPCET-ICHEAARLGLLEVLQTARANGCGWGTRT 98
            M NP  +  D+I+  +E  H  + LFFA VSR WR AW  R   T+A+T DTS SQL+H  DCGL+P  T +C   A LG L++L+ ARA G  W   T
Sbjct:    1 MGNPFQATADVISHASEFVHDDQFLFFASVSRAWRGAWRGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALGFRWDKMT 99
[Close]
BLAST of mRNA_H-paniculata_contig6213.13958.1 vs. uniprot
Match: D7FH78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH78_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.280e-7
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 0 
Query:    6 ISKTDIIARVAELSHGKKHLFFALVSREWRRAWGKRLKVTKAVTADTSASQLQHCFDCGLTPCET-ICHEAARLGLLEVLQTARANGC 92
            ++  +I+  +A+     + LFFA V++ WR AW +R  +T  VT DT+ SQLQH F+CGL   +T +C   ARLG L +L  A   GC
Sbjct:  110 MTNRNILLCLAQFVPDNQFLFFAPVAKGWRAAW-QRPTITAHVTPDTTTSQLQHSFECGLPQNQTGLCAALARLGKLNLLACAVGAGC 196
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6213.13958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMS7_ECTSI2.160e-1748.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDD9_ECTSI2.910e-1547.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FH78_ECTSI1.280e-742.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 42..484
e-value: 2.7E-20
score: 74.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 155..466
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 73..179
coord: 310..477
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 154..312
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 154..312
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 73..179
coord: 310..477
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 65..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6213contigH-paniculata_contig6213:7032..8525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6213.13958.1mRNA_H-paniculata_contig6213.13958.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6213 6469..12266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6213.13958.1 ID=prot_H-paniculata_contig6213.13958.1|Name=mRNA_H-paniculata_contig6213.13958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=498bp
MVNPLISKTDIIARVAELSHGKKHLFFALVSREWRRAWGKRLKVTKAVTA
DTSASQLQHCFDCGLTPCETICHEAARLGLLEVLQTARANGCGWGTRTCY
TAAACGQLHVLQWLRKNSCPLDAGMPWISAVRDVFNFCHRGREKACPWDR
LTCAMAAGRGHLNVLQWARRNGCPWGPETCLMAAARGNLGILRWARRHGC
PWGEETCSYAALNGHLGVLQWARRKGCPWTAVTCANAALAGHLGVLQWAR
QNGCPWGAETCFQAAYGGHLGLLQWARENDCPWDEETCHEAAYGGHLNVL
QWARQNGCPWTEKTCAYAALKGHLDILQWARQNDCPWTEKTCAIAAYGGD
LGVLQWARENGCPWDSDTCYLAACGGHLCILQWAHENDCPWDEETCSEAA
LEGHLDILQWARANGCPWDWKTCAGAAEQGHLKVLQWARENGCSWNEKTC
YLAAREGHLKVLQWASANGCPCDWKELRAFAKEGIVREWIDANGAGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf