prot_H-paniculata_contig62129.13956.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62129.13956.1
Unique Nameprot_H-paniculata_contig62129.13956.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.000e-24
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLINEFRV 76
            VY DNT+ LH  GNR++SSR KH+ALR+FFI++LV E KI+IHYV TE+  ADIGTKH  KHR ++L+ LIN F V
Sbjct: 1591 VYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNFDV 1666          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.860e-24
Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLINEFRV 76
            VY DNT+ LH  GNR++SSR KH+ALR+FFI++LV E KI+IHYV+TE+  ADIGTKH   HR ++L+ LIN F V
Sbjct:  922 VYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNFDV 997          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 4.730e-24
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLINEFRV 76
            VY DNT+ LH  GNR++SSR KH+ALR+FFI++LV E KI+IHY  TE+  ADIGTKH  KHR  +L+ LIN F V
Sbjct:  362 VYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNFDV 437          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 5.520e-24
Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLINEFRV 76
            VY DNT+ LH  GNR++SSR KH+ALR+FFI++LV E KI+IHY  TE+  A IGTKH  KHR ++L+  IN F V
Sbjct:  137 VYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNFDV 212          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 6.290e-24
Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLINEFRV 76
            VY DNT+ LH  GNR++SSR KH+ALR+FFI++LV E KI+IHYV TE+  ADIGTKH  KHR ++L+ LIN   V
Sbjct:  583 VYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNLDV 658          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 9.400e-22
Identity = 39/72 (54.17%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLIN 72
            +Y DNT+ LH  GNR++SSR KH+ALR+F+I++L+ E +I+IHY+ T++  ADIGTKHL KHR ++L+ +I+
Sbjct: 1092 LYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNKHRLKHLLDIIS 1163          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5KCX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX7_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.010e-21
Identity = 43/72 (59.72%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    6 TSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKH-LGKHRQRYLIKLINEFRV 76
            T+ LH  GNR++SSR KH+ALR+FFI++LV E KI+IHYV TE+  ADIGTKH + KHR ++L+ L+N F V
Sbjct:  189 TATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFINKHRFKHLMDLVNNFDV 260          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 4.460e-21
Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRT-YSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLINEFRV 76
            +Y DNT+ LH  GNR+ +SSR KH+ALR+F+I++LV E +I+IHY+ T++  ADIGTKHL KHR ++L+ +I+ F V
Sbjct:  903 LYCDNTATLHALGNRSSFSSRTKHIALRFFYIRELVSEGRISIHYIPTDSNPADIGTKHLNKHRLKHLLDIISSFNV 979          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5J9Q7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q7_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 8.240e-21
Identity = 41/76 (53.95%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLINEFRV 76
            +Y  NT+ LH  GNR++SSR KH+ALR+F+I++LV E +I+IHYV T++  ADIGTKHL K+R ++L+ +I+ F V
Sbjct:  748 LYCGNTATLHALGNRSFSSREKHIALRFFYIRELVSEGRISIHYVPTDSNPADIGTKHLNKYRLKHLLDIISSFNV 823          
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Match: A0A6H5J9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N2_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 8.270e-21
Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQFADIGTKHLGKHRQRYLIKLINEFRV 76
            +Y DNT+ LH  GNR++SSR KH+ALR+FFI+ LV E KI IH+V T++  ADIGTKHL K R ++L+ +I  F V
Sbjct:  280 LYCDNTATLHSLGNRSHSSRTKHIALRFFFIRDLVSEGKIFIHFVPTDSNPADIGTKHLNKDRFQHLLNMIKNFNV 355          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62129.13956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJH6_9PHAE1.000e-2463.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE1.860e-2461.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L5U2_9PHAE4.730e-2461.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMK0_9PHAE5.520e-2459.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JME8_9PHAE6.290e-2461.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K129_9PHAE9.400e-2254.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCX7_9PHAE4.010e-2159.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC00_9PHAE4.460e-2154.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9Q7_9PHAE8.240e-2153.95gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A6H5J9N2_9PHAE8.270e-2156.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62129contigH-paniculata_contig62129:666..896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62129.13956.1mRNA_H-paniculata_contig62129.13956.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62129 666..896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62129.13956.1 ID=prot_H-paniculata_contig62129.13956.1|Name=mRNA_H-paniculata_contig62129.13956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
VYIDNTSALHVAGNRTYSSRVKHVALRYFFIQKLVKESKINIHYVKTENQ
FADIGTKHLGKHRQRYLIKLINEFRV*
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