prot_H-paniculata_contig615.13860.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig615.13860.1
Unique Nameprot_H-paniculata_contig615.13860.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length260
Homology
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BLAST of mRNA_H-paniculata_contig615.13860.1 vs. uniprot
Match: A0A6H5JRR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR9_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 4.740e-13
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:   56 GGGWRPPVAKGVVIGGRSLRSTTESWDEQRRAKAEEARVTADIEEAFRTLTGVADLRRQDAVGARRDRARESNARAD 132
            G G     AKGVVI G + R   ESW+E RR+KAEE R+   +E+AF+ L GVA  RR++AVGARRDRARESNARA+
Sbjct:  986 GAGAGVKAAKGVVIAGGTTRPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRRENAVGARRDRARESNARAE 1062
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BLAST of mRNA_H-paniculata_contig615.13860.1 vs. uniprot
Match: D7FUQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ6_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 8.580e-13
Identity = 50/90 (55.56%), Postives = 60/90 (66.67%), Query Frame = 0 
Query:   44 AAAAAVSEGNKCGGGWRPPVAKGVVIGGRSLRSTTESWDEQRRAKAEEARVTADIEEAFRTLTGVADLRRQDAVGARRDRARESNARADE 133
            AAA A       G G    VAKG VI G + R   ESW+E RR+KAEE R+   +E+AF+ L GVA  RR++AV ARRDRARESNARA+E
Sbjct:  938 AAAEAFEAAAGVGAGXGVKVAKGAVIAGGTPRPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRRENAVYARRDRARESNARAEE 1027
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig615.13860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRR9_9PHAE4.740e-1359.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUQ6_ECTSI8.580e-1355.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig615contigH-paniculata_contig615:4587..6037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig615.13860.1mRNA_H-paniculata_contig615.13860.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig615 4585..6037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig615.13860.1 ID=prot_H-paniculata_contig615.13860.1|Name=mRNA_H-paniculata_contig615.13860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp
VNSRAQALCPGSSDPQGGRGKGGTSTGGRTDRATAAAVAVLAGAAAAAVS
EGNKCGGGWRPPVAKGVVIGGRSLRSTTESWDEQRRAKAEEARVTADIEE
AFRTLTGVADLRRQDAVGARRDRARESNARADEGHGRASKRRRMQAEIKA
AELAAKAREAHKVAARLKEVAVAAAAATAKKEARARGRSSSRGRSVDRRG
NTRGRATSSRARLHDATRCSASPRRQPSTRQSEQLRRGDRSRGKSWHIDE
QPQTPGNFNG
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