mRNA_H-paniculata_contig6117.13822.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6117.13822.1
Unique NamemRNA_H-paniculata_contig6117.13822.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: D8LGC6_ECTSI (Eukaryotic translation initiation factor 2B gamma subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC6_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 6.610e-83
Identity = 134/176 (76.14%), Postives = 149/176 (84.66%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKFKETFTGALSIAIVVINGSPDTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEAPVKDSKGRKTVRPKRDEEDIDYIGLTQSGRLVIKLPKLFVEE 528
            +AV+LA EDG RLYPLTQD PA LLPVLN PLLHYQLELLEKAGY+EALVVCSRVTE  V+K+KET+TGAL++ +VV+NGS DTAEVLR V+  IRSDF              DLAELHVS+ SDVTM+VKEEAPVKD+KGRKTVRPKRDEEDIDY+GLTQSGRLVIKLPKLFVEE
Sbjct:    8 QAVILACEDGKRLYPLTQDVPAPLLPVLNNPLLHYQLELLEKAGYTEALVVCSRVTEVGVAKYKETYTGALTLDLVVVNGSLDTAEVLRQVAGSIRSDFXXXXXXXXXXXXXRDLAELHVSKRSDVTMVVKEEAPVKDAKGRKTVRPKRDEEDIDYVGLTQSGRLVIKLPKLFVEE 183
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BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: A0A835YVP1_9STRA (Eukaryotic translation initiation factor 2B gamma subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP1_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.710e-48
Identity = 90/177 (50.85%), Postives = 129/177 (72.88%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKFKETFTGALSIAIVVINGSPDTAEVLRHVSDRIRSDFLLLPGDLVCEQV-LSDLAELHVSRLSDVTMLVKEEAPVKDSKGRKTVRPKRDEEDIDYIGLTQSGRLVIKLPKLFVEE 528
            +AV+LA  DGARLYPLT++ P +LLPVLN+P+L YQL+LLE+AG+  ALV+ +  T + V +F + ++GAL++  VV +GS DTA+V+R   D+I  DF+++PGDL+CE+  L    E H  R + +TM+++EE    D KG K  RP+RD+ED+D+IGLT  GR+V+K P L VEE
Sbjct:    7 QAVILACGDGARLYPLTEECPLSLLPVLNRPILQYQLDLLEEAGFHRALVIAAEETSSQVFRFLDEYSGALTLDRVVTDGSLDTADVIRQARDKITGDFVVVPGDLICEKGHLLAAMERHRRRGAALTMVLREEGLEVDKKG-KLGRPRRDDEDVDFIGLTPDGRVVMKAPLLDVEE 182
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BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: A0A485L011_9STRA (Aste57867_13374 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L011_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.130e-34
Identity = 76/174 (43.68%), Postives = 114/174 (65.52%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKFK-ETFTGALSIAIVVINGSP-DTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEE---APVKDSKGRKTVRPKRDEEDIDYIGLTQSGRLVIKL 507
            +AV+LA   G RLYPLT++ P  LL V NKPLL+YQL LLE +G+S+ LV+ +   +  +  +    + G + I +V + G   +TA+ LR VSD+IRSDF++L GDLV + VL  +A+LH    + VTML+K+E   APVK +K ++  +P+RD E ID +GL ++   V+ +
Sbjct:    5 QAVILAGGSGVRLYPLTEETPKPLLLVNNKPLLYYQLALLENSGFSDVLVITTTEMQEQICDYTLHQYDGKIGIDVVAVEGDGGETADALRAVSDKIRSDFIVLAGDLVTDCVLQHVADLHRINDASVTMLLKQEVIEAPVKGAKSKE--KPRRDREMIDCVGLVEADSRVVHI 176
[Close]
BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: W4GWE2_9STRA (NTP_transferase domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE2_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.220e-34
Identity = 77/174 (44.25%), Postives = 113/174 (64.94%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKFK-ETFTGALSIAIVVINGSP-DTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEA---PVKDSKGRKTVRPKRDEEDIDYIGLTQSGRLVIKL 507
            +AV+LA   G RLYPLT++ P  LL + ++PLL+YQL LLEK+G+S+ LV+ +   +  +  +K   + G + I +V + G   +TA+ LR VSDRIRSDF+++ GDLV + VL  +A+LH    + VTML+K+E    PVK SK +   +P+RD E ID IGL  S   V+ +
Sbjct:    5 QAVILAGGSGVRLYPLTEETPKPLLLLNDRPLLYYQLALLEKSGFSDVLVITTTEMKDQICDYKLRQYDGKIGIDVVAVEGDVGETADALRAVSDRIRSDFIVIAGDLVTDCVLQHVADLHRINDASVTMLLKQEVIGEPVKGSKSKD--KPRRDREMIDCIGLVDSDSRVVHI 176
[Close]
BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: A0A6G0WUG6_9STRA (NTP_transferase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUG6_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.310e-33
Identity = 73/172 (42.44%), Postives = 110/172 (63.95%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKFK-ETFTGALSIAIVVINGS-PDTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEAPVKDSKGRKTV-RPKRDEEDIDYIGLTQSGRLVIKL 507
            +AV+LA   G RLYPLT++ P  LLPV  KPLL+YQL LLEK+ +S+ LV+ +   EA +  +  + + G + I +V +     +TA+ LR VSD+IRSDF++L GDLV + VL ++A+LH    + +TML K E     +K  K+  +P+RD E ID +GL ++   V+ +
Sbjct:    5 QAVILAGGSGVRLYPLTEETPKPLLPVNGKPLLYYQLALLEKSDFSDVLVITTTEMEAQIRDYTMQQYDGKIGIEVVAVESDGSETADALRAVSDKIRSDFIVLAGDLVTDCVLQNVADLHRINDASLTMLFKPEVVDTSAKAAKSKEKPRRDREMIDCVGLVEANSRVVHI 176
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BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: A0A418AQP6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AQP6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.190e-33
Identity = 75/172 (43.60%), Postives = 114/172 (66.28%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKFK-ETFTGALSIAIVVINGSP-DTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEAPVKDSKGRKTV-RPKRDEEDIDYIGLTQSGRLVIKL 507
            +AV+LA   G RLYPLT++ P  LLPV N PLL+YQL LLEK+G+S+ LV+ +   +  +  +    + G + I +V + G   +TA+ LR V+DRIRSDF+++ GDLV + VL ++A+LH    + VTML+K+E   + +KG K+  +P+RD E ID IGL ++   V+ +
Sbjct:  328 QAVILAGGSGVRLYPLTEETPKPLLPVNNHPLLYYQLALLEKSGFSDVLVITTTEMKDQICDYTLRQYGGKIGIDVVAVEGDGGETADALRAVADRIRSDFIVVAGDLVTDCVLQNVADLHRINDASVTMLLKQEMVEEPTKGSKSKEKPRRDREMIDCIGLVEADSRVVHI 499
[Close]
BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: A0A067BVC7_SAPPC (NTP_transferase domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BVC7_SAPPC)

HSP 1 Score: 127 bits (318), Expect = 2.300e-32
Identity = 72/172 (41.86%), Postives = 110/172 (63.95%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKFK-ETFTGALSIAIVVING-SPDTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEA---PVKDSKGRKTVRPKRDEEDIDYIGLTQSGRLVI 501
            +AV+LA   G RLYPLT++ P  LL V  KPL++YQL LLE +G+S+ L+V ++     V  +    + G +S+ +V + G + +TA+ LR V+D+IRSDF++L GDL+ + VL ++A+LH    + VTML+K+E    P   SK     +P+RDEE ID IG+  +   V+
Sbjct:    5 QAVILAGGSGVRLYPLTEETPKPLLLVNGKPLIYYQLALLENSGFSDVLLVTAKEMLDQVQSYVLGQYDGKISVTVVAVEGEATETADALRAVADKIRSDFIVLAGDLITDCVLHNVADLHRINDATVTMLLKQEVAEVPTAKSKAASKEKPRRDEEMIDCIGMVDAENRVV 176
[Close]
BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: A0A1V9YU69_9STRA (Translation initiation factor eIF-2B subunit gamma n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YU69_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.280e-32
Identity = 72/170 (42.35%), Postives = 112/170 (65.88%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSR-VTEAPVSKFKETFTGALSIAIVVING-SPDTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEAPVKDSKGRKTV-RPKRDEEDIDYIGLTQSGRLVI 501
            +AV+LA   G RLYPLT+D P  LL V  KPL++YQL LLE +G+S+ L+V ++ + +   +     + G +S+ IV + G + +TA+ LR V+D+IRSDF++L GDL+ + VL ++A+LH    + VTML+K+E     +KG K+  +P+RDEE  D IG+  +   V+
Sbjct:    5 QAVILAGGSGVRLYPLTEDTPKPLLLVNGKPLIYYQLALLENSGFSDVLLVTAKDMIDQLKTYVLSQYNGKMSVEIVAVEGDATETADALRCVADKIRSDFIVLAGDLITDCVLHNVADLHRINDASVTMLLKQEVQETPAKGVKSKEKPRRDEEMTDCIGMVDAENRVV 174
[Close]
BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: A0A484ED35_BRELC (NTP_transferase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ED35_BRELC)

HSP 1 Score: 119 bits (298), Expect = 2.210e-29
Identity = 65/165 (39.39%), Postives = 101/165 (61.21%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKF-KETFTGALSIAIVVINGSPDTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEAPVKDSKGRKTVRPKRDEEDIDYIGLTQSGR 492
            +A++LA   G RLYPLT++ P  LLP   KPL+ YQL+LLE +G++E LVV       P+  +    F G + + +  +  + +TA+ LR ++D+I+ DF++L GDLV + VL ++A+ H    + VTML+++EAP    KG K    +RD++  D IGL    R
Sbjct:    5 QAIILAGGRGIRLYPLTEETPKALLPANGKPLIWYQLQLLETSGFTEVLVVTVPDLLLPIQDYVTREFDGKIHVELCEVADNTETADALREIADKIKCDFVVLAGDLVTDVVLHNVADFHRINDASVTMLLRQEAPAHKGKGEKA---RRDKDMTDCIGLVAGQR 166
[Close]
BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Match: A0A5D6XWU8_9STRA (NTP_transferase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWU8_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.180e-29
Identity = 67/163 (41.10%), Postives = 100/163 (61.35%), Query Frame = 1 
Query:    1 KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALVVCSRVTEAPVSKF-KETFTGALSIAIVVINGSPDTAEVLRHVSDRIRSDFLLLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEAPVKDSKGRKTVRPKRDEEDIDYIGLTQS 486
            +AVVLA   G R+YPLT++ P  LLP   +PLL YQL LLE AG++EALVV +      +  +    F G L + +  +  + +TA+ LR V+DRI+ DF++L GDLV + V+  +A+ H    + VTML+K E      K R   +P+R+++ ID +GL +S
Sbjct:    5 QAVVLAGGSGIRMYPLTEETPKALLPANGRPLLWYQLSLLESAGFAEALVVTATSMLPQLQDYVARAFDGKLHVELAAVEDNCETADALRAVADRIKKDFIVLAGDLVTDVVVHSVADFHRLHDASVTMLLKREPSAAALKARGE-KPRREKDMIDCVGLVES 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6117.13822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGC6_ECTSI6.610e-8376.14Eukaryotic translation initiation factor 2B gamma ... [more]
A0A835YVP1_9STRA2.710e-4850.85Eukaryotic translation initiation factor 2B gamma ... [more]
A0A485L011_9STRA2.130e-3443.68Aste57867_13374 protein n=1 Tax=Aphanomyces stella... [more]
W4GWE2_9STRA4.220e-3444.25NTP_transferase domain-containing protein n=2 Tax=... [more]
A0A6G0WUG6_9STRA2.310e-3342.44NTP_transferase domain-containing protein n=1 Tax=... [more]
A0A418AQP6_9STRA4.190e-3343.60Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A067BVC7_SAPPC2.300e-3241.86NTP_transferase domain-containing protein n=3 Tax=... [more]
A0A1V9YU69_9STRA4.280e-3242.35Translation initiation factor eIF-2B subunit gamma... [more]
A0A484ED35_BRELC2.210e-2939.39NTP_transferase domain-containing protein n=1 Tax=... [more]
A0A5D6XWU8_9STRA4.180e-2941.10NTP_transferase domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6117contigH-paniculata_contig6117:3774..12912 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.2
Seed ortholog evalue3.6e-67
Seed eggNOG ortholog2880.D8LGC6
Preferred nameEIF2B3
KEGG rclassRC00052,RC00120
KEGG koko:K03241,ko:K10258,ko:K19398
KEGG ReactionR07761,R09449,R10828
KEGG Pathwayko00062,ko01040,ko01110,ko01212,ko03013,map00062,map01040,map01110,map01212,map03013
KEGG ModuleM00415
Hectar predicted targeting categoryother localisation
GOsGO:0001666,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005851,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009987,GO:0010001,GO:0010033,GO:0010243,GO:0010467,GO:0014003,GO:0019538,GO:0019899,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0021782,GO:0022008,GO:0023052,GO:0030154,GO:0030900,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034284,GO:0034641,GO:0034645,GO:0036293,GO:0036294,GO:0042063,GO:0042221,GO:0043043,GO:0043170,GO:0043434,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0048468,GO:0048513,GO:0048518,GO:0048583,GO:0048584,GO:0048709,GO:0048731,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050851,GO:0050852,GO:0050896,GO:0051020,GO:0051716,GO:0060322,GO:0065007,GO:0065009,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901698,GO:1901700
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG1208@1,KOG1462@2759
Ec32 ortholog descriptioneukaryotic translation initiation factor 2B gamma subunit
Ec32 orthologEc-06_002600.1
EC1.3.1.93
COG Functional cat.JM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03012,ko03036
Exons5
Model size528
Cds size528
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6117.13822.1prot_H-paniculata_contig6117.13822.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6117 3774..12912 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930687.8642578-CDS-H-paniculata_contig6117:3773..38451622930687.8642578-CDS-H-paniculata_contig6117:3773..3845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 3774..3845 -
1691481406.7052562-CDS-H-paniculata_contig6117:3773..38451691481406.7052562-CDS-H-paniculata_contig6117:3773..3845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 3774..3845 -
1622930687.879917-CDS-H-paniculata_contig6117:4889..49941622930687.879917-CDS-H-paniculata_contig6117:4889..4994Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 4890..4994 -
1691481406.725211-CDS-H-paniculata_contig6117:4889..49941691481406.725211-CDS-H-paniculata_contig6117:4889..4994Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 4890..4994 -
1622930687.8922312-CDS-H-paniculata_contig6117:8276..83401622930687.8922312-CDS-H-paniculata_contig6117:8276..8340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 8277..8340 -
1691481406.7398067-CDS-H-paniculata_contig6117:8276..83401691481406.7398067-CDS-H-paniculata_contig6117:8276..8340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 8277..8340 -
1622930687.9054427-CDS-H-paniculata_contig6117:10682..108301622930687.9054427-CDS-H-paniculata_contig6117:10682..10830Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 10683..10830 -
1691481406.7542174-CDS-H-paniculata_contig6117:10682..108301691481406.7542174-CDS-H-paniculata_contig6117:10682..10830Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 10683..10830 -
1622930687.927315-CDS-H-paniculata_contig6117:12773..129121622930687.927315-CDS-H-paniculata_contig6117:12773..12912Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 12774..12912 -
1691481406.762931-CDS-H-paniculata_contig6117:12773..129121691481406.762931-CDS-H-paniculata_contig6117:12773..12912Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6117 12774..12912 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6117.13822.1

>prot_H-paniculata_contig6117.13822.1 ID=prot_H-paniculata_contig6117.13822.1|Name=mRNA_H-paniculata_contig6117.13822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
KAVVLAYEDGARLYPLTQDYPATLLPVLNKPLLHYQLELLEKAGYSEALV
VCSRVTEAPVSKFKETFTGALSIAIVVINGSPDTAEVLRHVSDRIRSDFL
LLPGDLVCEQVLSDLAELHVSRLSDVTMLVKEEAPVKDSKGRKTVRPKRD
EEDIDYIGLTQSGRLVIKLPKLFVEE
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mRNA from alignment at H-paniculata_contig6117:3774..12912-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6117.13822.1 ID=mRNA_H-paniculata_contig6117.13822.1|Name=mRNA_H-paniculata_contig6117.13822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9139bp|location=Sequence derived from alignment at H-paniculata_contig6117:3774..12912- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGCGGTAGTGCTCGCGTACGAAGATGGAGCGAGACTATACCCGCTGAC
ACAGGACTACCCCGCTACTTTGCTTCCCGTGCTCAACAAGCCGCTGCTCC
ACTACCAGCTAGAGCTTTTGGAGAAGGCGGGCTACTCGGGTACAGCATAA
GCAGCACTCAAAGGCACTAATTTACTTTACTTCATGTATGTCCTTATAAC
ATCCCATGTGCTAAGATAGTCGTTTCGGAATTTTCTTCAAGCCTCAACTC
CAGTCAACTTCAAAATACGGGATGTAGCTCCAGTCTACAATCAAGTAACT
CCAAAAGCCCGGGACTAAACGCTGGATATACTGTGATTAAACCCTTTTAA
AATAGTCATTTCTTGGGGTCTCTAACTCTTGCCAGAGAAGCGAAAAATAA
TATGAGGACTGCTACGTTGCATGAAAGGCCGCAGCCTGCTATACACATCT
CACACAGCAGAGACTGCACATCTTTCACAGCAGTGACTGCACAAAACAAG
TGGATTTGGTCGCGTCTCGAGAACTTGCAAGAACGAACTGAAACTATTTC
TCGTGGGTGCGCAGCAGGTGCATCTTCGGGATGGGTAAGCGGCGGTGTGC
AGGGTGGGTGATGACATCAACAAAATTAGTTTTGGTTTTCGTTTCGTGGG
AGGGCTGGAGGCGTTTTTTGTCTTGGCCTGCAATTGCTCGGTATACACGA
TCTTGCAAAACATGATATGGAATATACACGCAGCTATACAGTCCTGACTG
CACTGTCTATACTGCCTTGGCTGCTGCTGGAGGCAACCACCTTCGGCTTT
CGCGTCGTGCAATAAATCGTACGGCCTCACCCATTATTGTCTGTGTGAAG
AACGCGAACAAACGTGTGCGCGATCAGCCAGTACAAACAGTTAACCTCTC
GGACGACTGAAGATGAATAGTTGGTGAAACCTCCCGACAAAGATATTATC
AAGGTATTGATCTAAGTAGTTGAAGAAGGTGCGGTGCGCGCATGTAATTT
TTAAGCTGTTGACGCGCTGTATTTTTTTTCGGTTTCGACTATTATTCGGA
GCAGTCAGTCGTAGGTGGTCCGAGGCACATATCAACTTACCCATCATGAT
GATTCAACATTCAGAGGCGAATATATTTTGTTCTTGTCATGAATGCTCCT
CAAAGTAGTCGTTTTTATGCGGATCCGGAGGGTGAAACAGTTGCACAGTC
TCGAAGTCTGGGGCGTGCGTAGTACAGCGTGAAATCAGTATTAACAGCAC
AATTTCATATTTCTCAGTGCATTATCCACAATTTTTTCCGATTTTTTTTT
TTTTTCCCGAAGTCACCTGTGCGCAGTGACTTAAGAAGATGATTCGAAAA
GGGCCACGAACAGGAACACCTATCTGCTTTGAAAGTTATCACATGACCAG
GTATGGGTATATATGAGTGTCGTTTGTAGACAACGGAGTGAGGGTGATTT
TAACCCCGTCAGCCCCAGAACCCCATTTATTCCCCCTGCAATCCCTATCG
CTCGAAAGACATGGTTATTGACGTGGCGAAAGTTACGTGTGTCCTGACGG
GTATTTTTTTGTTTTTAGTTGTCGTGGCTACCGGCCTCTGGAGACGGAAT
GAAACAAACCTAAATTGAAGTAAAGCTCTAGTCGCCAGCTTTCTAACGAA
CCCACAAACTTGTGTGGTGCCTTTTTTGGGGGGGGGCTCTTTGCACCAAA
AACGCCACTTTTTTTTAATGCGACGACTGACGAGTCTGGATCCACGGTTG
TGGATGTTCATGGACACATTGTCTGGGGTTTTTTTTTTTTGGGTGGGTCC
TGGATGTATCGGCACGAAAAACCTGACAGTGACGACTGGAGTACAAGCTA
TTTTTTTTTTTTTGCGTGAATTAGTATGTGCCCTCTCTTCCTATTTTCTC
CCCCCGTTATTGATCTAATTAGAAATGTACACAATTGAAATTTGAACCCA
GTTGCATAGCCTACACATGTTCACGATGATGGAGTTATTATACGAGCGTT
ATAGTTCTAGTAATTGTGGCACGCGGGTCCCTCCCCCCCCCTCCCCGCTC
ACACACTATTTCGTTGCTTTTACAAAAAACAGAGGCCCTCGTGGTGTGTT
CCCGGGTCACCGAGGCTCCGGTATCAAAATTCAAGGAGACTTTCACTGGG
GCGCTAAGCATCGCTATTGTGGTCATCAACGGGTCCCCCGACACAGCCGA
GGTGCTTCGTCACGTGTCGGACAGGATAAGGTATGATAATGATAATGATA
ATGATAATGATGAGAAGTCGTCAATCGATGGATAGATCTCCAGGATATTA
TTTCCAACGGCACACTAGTATTTGTTGTCAGTAGTTATAGCTAATGCCAT
AATTTTCGAGAGAAGAATCAAGTGCGTTGGAAAAAACCGCTCGCAATCCG
GTGCGACGTCTGCGAGCTTTACGGTAACTTGTAACGTGATATTCCGCGGA
TATTTCAACCCTTTCAGCCTTCAACGCTATCTCGGAACAGAAATGTTACC
TGATAGTTCCCGCAGGAGGAGAGTGGACAGGTTTTGGATCTCGGAACACT
AGATCAAGACCATGCCTGGGTAGGTTCAGGGTGATCATGCTCATTTTCTT
GTTCTGCACGGCCAAGCAGCACCTTTTGTTTATCTCCCGTGTTCAGTCAT
CAAAATGGAATCCTCATCGAATCCCCACGGGCGGAAAAAAGGCTTGAAAC
AAAATAGGGAGTTTCCCACTACAGTATGTGTGTAGCATCTTCTAGTCATG
GTCATAGCGTCGTGGATCTCTGAGCTTGTGGTTCGTTTGACGACATCATG
CCCTGGTGGTGCTTGTGCGGCGTATGGCGCATACACCGCTGCACAGTCAG
TCAATCACTCGAGGTGTGATGTGAGATGCTACTGCTTCAGCTCCACTGCC
ATGCCTTTCCCCCTGGTTGTTTGCTCTCCCCCTGTACCCCTTGCTTCACT
CCCCCCCCCACTCCTCGTGCCTTCGCTGTACACACCTGTCTTGTGCCACC
GTTGATGTTTGATGTTAGTTGTCATGGGTCATGCGTGCAATAAAAAAAAT
ATAGACTAAGGTTTTTCCAGCAGGTCTCCGTTTGTCGGTTGTTTCAATTA
AAAAAACTGTCGACACTCATGTACCCAGCTGCTTGCACTTCAGTCCCACT
GCCATGGCTTATGTGCCCTGGTTTCCCGCACCCTTCCAGTACCCGCTGCA
TTACTTCCCGCCGCGTGTCTGCGCTGATCACCCCTGTCTTGTGCCACCTT
CTAAACTCGGATGCGCGTTGTCCATGTAATATCAAATTCGTATCTGATAG
TATTTCAATTTTCCACCTTGCAATGTGCACCAAACTGCTTGTTTTCCTCC
CATCATGCAGCTTTTTTTTTTTCTGTCTGACCGTCTCACTATTTCACTAT
CTCTACACCTTATTTGTCTTCGTCTCTCGTCTCTTGGACATGCGTCTCTA
TCGGCCCGTAGTCTTCGTGGTAGGGATTTGGCTCTTTACTGCAAAATCAT
TGGAGTTGAGTGTACTTTTTTTTTTCAGTTATTCAGAGTTGCAAAACCGT
TACGAAATTGTGCTTTAGATTCCCTTTTTCAAAAAATTACTTGATTATAG
AGTCGAAAAAATGTTCGGCAACGACCGCCACCACCCCATATTACTTAATG
GCAGTGATGTCATAATCTTGAACGGAATGAACACAATCCACGCACGTTAT
AAAATATTCTGCTCATTTTTTCAGATAACCTGTTGTAACCCCGCAAAGTA
TGGTATGGGTGGTGACCGGTCACCCGTCCTCCCCGAGAACACCTCACGAA
GCGTTTGGAGGGTTGGGACACAACATAAAAAATAGATGAGCAACAGCCTG
GTAGGGTTGTTGCCCTACCACCTAAATCCCAGCCCTGTTTGGGCGTGCCA
GTGGCTCGTGTGCCGTCATATCAATTGCAGTCTTGAGTATTGCTGTATTG
ATGTATTCGTCACTTCACAAAAATTAAAAACAAAGAAGATTTTTGGGGGG
ATTTATGGTTTATATTTTTTATAAAGTACCAAAGACACCCAGAAACCAAA
AACCAAGAACTAAATCACATCACAGCCCAAAGAAACAAAACACAAAAGAA
GAAAGGGAAAAAAATACCCAAGATCTATCTGTACTGCCGATGTTGGTGTG
CTGTCAGCTATCAGCTGTTTCAGCTGCGGGAGTGTTTTTTGTTTTTTTCA
TCACATTAGTCAAATTGACACGACCCGCTGTCGTTTTTTACTCCTTTTTT
ATTTATTTTTCTTGTCACATGAGCTATATTTCTAGGCCCGAGGTCATTTT
GGGTGAAAATGGAAAATGACCAACCTACATGTTTGGAATATAACCTGAGG
GGAATCTCATAACCTTTGCCGAACCCCATAACCTTCGATAACCCATAATA
GGATATTACCATCATTACTTCATAGGGATACAAACATAACTTGTTAGAGC
AACCAACCAACCAACCAACCCTGATGCCTCCTTTTCTTCATCCATCTCCT
CGTCTTGTAAATCGCACGGTGGTTGGCTTGATTCGTCTATGGCAACGTCG
CGGCGACGATTGGGCTCCTCAGGAGCGACTTTTTGCTGTTGCCGGGAGAT
TTGGTCTGCGAGCAGGTGCTGAGCGACCTTGCTGAGGTGAGCACGTGGGA
GTGTGCCGCTTCGGAAGCATGGCGAAAATGTGCCGGTGCCCTCCAAGGAG
ATGATTGCTCTCACAAGTAGACGGTGTCTTGAACCCCCTGGCCCCTCCCC
CCCCCCCCTACTAAACAGCAGGGGTGAGAAGCGAGATGATAAATGAGAAA
TATCGAGCAGAACGAAAGAACGATATATATGCCCTTCGTTCTGATTGGCG
CAGCAGCCTCGACGGGCGAAAGTCGGGACCCAATCAGAAGTGCGTACTCG
TATTTTGACGGGTGACACATAATTACTCACCGTTAGGTGGAGAAGGGGGT
GAAGACACGGCCTTATTATTTTTTTGTGTATACTTCGGTCGCTTGTTAAA
GTAATGAAAAAGCTTCTCTGAAAATCATTCGGGCACTTTTTTCTGTGAAA
TTTCCTGAACGGGTTCTGTATGGGATTATTTTCCGGGGAAAAGCTCTCCG
AGATCGGGGCCCTTTTCCATCGAGGTGCCTTTTCCTCTCATCTCACGTGG
TTTTTTAGACGGTTTACTGTGAGATCAAAGCTCGCAGGAAAAGGTGTTTC
ATCACACACGCCTTCCCAATACACACTGAACCCGCTATGGATATGATGGA
TATAGATAATTTGGATACAGACGGTGTGGATACATCATCTGTAGGTGATG
ACGAGATCATGGCTGCGGGGCAAGCCATGCTCCACCGAATTCATGTGGCA
AAGCTGGTAGCAAACGCGTGCGTGGATCGTATGCAGGCGGAAGAGGGGGC
AGCGGGGGAAGGTCGGGAGGTGGATGGGATGTTCGTCGATATTCCACAGC
AGGATAGGCTAACGCGTAGGGTTAAGCCTAGGGTCAATTACGGTAGTTGT
TGTTGTTGCTGCTGCTGCTGTTGTGAGTGTGAGTGTGTGAGTTACTGAGC
GGGAAGGGCACAATTACAGTACTAGTTGTTGCCGCTGCTGCTGTTGTGGG
TATTTGTGTGGGTGTGGGTGAGTGACTGAAGGGAAGGGCACGCTGCGAGC
ATGGATCCTATTTTCAAAGTGAAGGCAAATGATGACCACTATTGCGCAGG
CCAGAGAGACGTACGTGTATTGTCACGCCTGTCCATGGGTGTACAAATCC
CCCCCAAAATTCCCCACCTGTAACATATGGTTTGGAAAACTGTTTTCGTC
GAAACAATTCTCAGGAAAGAGGTGACTGCCCGAATTATTTCCAGAGGTGT
TTTCATGACTATAACAAGCGGCCTTCGTACAGTATTTTTTTTTTTTTTCC
CGTATGAATCCAGTTATTTCAGAACGGATATGGCATGTGAGGAAAAAGTA
AAAGAAGAAAAAAAAAATGTCGAGAGCGCTGCATGTAGTTATTCATTGTG
GGCAAGAAACTATGTCAACTATCTGTCTCTGTCTGTGCTGTAGGTACTTA
TTATCTGAAGTGAACTTGAAGTGTCCTTGTTTGAAGAGGGGCGGCTTCTC
TATCCCCGTGGCCATGTCATTGGATAGGCGTCGTTTTTCGCTGTCTCCTT
TGGGGTGAATGGGAATTAGATTAGATGGGTGTCCCGGGGTAAATGAGAGG
GTTGATAGACTAACGTGTTGATGGGGTTGATGATGGTCACAAGGGTGTCT
ACATTAGGTTCGCCGCTGGCCTAGCCATGGCCTGCTTATCCGCGGCGAGG
AGGTCTGAGCTAGCGTAGTCGTAGTCTACTATTCTATACATTTTTGCAGT
TTACGTGCGTGTCATGTTGGGGTTTTATGTAGCTCACAGTCGAGGATATC
CTCTCCTTATTTCCCACTCCCTCCATACAGTATGTACTAAATATCTGCCT
TGTGTAAATTTTGGTGTTGGTGAAACTGAGAGAATATGAATGCCGCTCGA
AAGCCCATTACGTTATTTTTTTGCACTATCTTGATAGGTATCTTTGTAAA
TATAAAAACAAAAAAAACGCACTGATTTGAGGAAACCGTCCTCGCAACCT
ATCCCCCGCCTCCCAGAAATGGAAGATAAAGGTATCTTAAGACCATGTCT
TACGGTAGGAGTTACTCGAGATAACTTTTTTTTTCTGGCCAATTTCTCCC
CAAAAAGCAACTTTGTTCAGGTTATGGGGGGGAAAATTCGAGAGAGCGTG
ATCCCCATTTTTCTCCAGATATTCCTCAAACGTGTAGGCGAAAGTTCCCC
CCAATTTCACCTGTTTTTGGGACGGGGATAAATTCCCCCAACCTCTATTT
GTATTGTGCAGGGTTTGCTGTACGCATGCGGATGATCCCACGATCATGAT
GGGGGCCAACCACCACACACTACCATCATGCAGCACGCACGTGTCACACC
CCCACACATCTCCAACATATTAAAAGGAATACTGAGTGTTACATCTATCA
ACATCACATGTTGACGCTAACGCATCCAGGCTAGACACATGATGCCGAGG
CGATAGCCGCGGGACTGCAGCCTTGCAGGAGCACCTAGAGTTCCCATCGC
TGGGCAGCGATGGCGACCTTCAGCTGCTGCTGCAAATGCTGCCACCGTTG
TTATAGATGACGATGGCTACAATGATAACCGTCCAGAATCCATCACACTT
TGCGAAACCGGACGATTACATACGGCATAGTTGTGCGTTGTTTGATCTGG
AAAAAAACAAAAGTTCTAGTAGGTCAAAGCTCGCCCTCAACAGCAGTAAA
GAACAATCAGCTTAGGTGTACGTGGTCACGCTCCACAGTCGAATTATTTT
TGCCTTTTTTTGCCTTTCTTTTTTCTGGCTCGGGTATCATTCACTCAGAT
AATTTCCTCCGTGTTTTTTTTCTCGACCGAAGGTAACCTCCAGGAAAAAG
ACAAGTCTCTCGAAAAAACTCCTGCTGTAAGATGTGGGCCAAGGAGGAAA
ATCAGCCTACTTTTGTATATTATATTATATTATATTATATCTTGTGTACA
TTTTGACATTTTCATCAAAATCCAAGCGCATGATTTCGGCTTGTACACAG
GTATATACTATCCCCAAGGATTTGTCTTCCTATAGGATATGGTTCGAGAA
ACTGTCCTCTCAATTTCAGGAATATTGCATTTTGTATTTTTGTTGCCCGC
CTAAAAAAGCGCGTCTGACATGCTCTACACAGAATGAACCGAATCTCGCA
CGTTTATGTTTTATATTTTTATTGATTGTTAACTGCTAGTTGAAGGTCGT
GGGTGACGTCCACAAAACTCATCGTTGCTTCTGTTCCGTTCCGTTCCGTT
CCGTTCTGTTATGTTCTGTTCTGTTATGTTCTGTTCTGTTCTGCTCTGTT
CTATTTTTGTTTTGGCAGTTACACGTCTCGAGACTCTCGGACGTGACGAT
GCTCGTTAAGGAAGAGGCGCCGGTTAAAGACTCCAAGGGGCGGAAGACAG
TACGGCCCAAGCGGGATGAAGAGGTATGATATAGACTCTCATGATTTCGT
TTTAAACAGCCCTGCGCCCTGGATTCGCGAACGGAAGGGTGTCTCGCGTC
TTGCAGCGGCGCATGCTCCCGTCGTTCCAAGCTCCCCCACGACCCCCCCC
CCCCACCCTCACACAAACGAAGCTACACTGGCTCATCCCATGCGTGTCTC
TTTCGTAGCACCGCATGGTTACCTTCTCGACCCATGACTAAGACAAGAGC
CGTTAGCGTCGCCAAGAAGGCGCGCCCATTCCCAAAGAACGCTAGTTGAA
GGGGACTCCAGCAGTCATGGCGAATCCGCAAATAGTAGTAAAATATATGT
ATTACGCTAAGGTTGTGGTCGTGATTATGGTGATGATGGTGATTGTTCCG
GAGAAGTTTTTTTTTTTAAGTGTTCCTCGTGTTCTAGTCAAATTTTTTTT
CTAAGTATGAATAATGACGGATATGCGTTGTTCGTGGGTGTAGAGATAAA
GCCACTGTAGAGCCTACCCCAGCGAACCGTCGTTGAACGTGGGTCGGAGA
CAAGAAAAGGAAGTGCAAGGTCATGGCCTTGAGGTGTATCTGCTGCTGGC
AATGATGGTTATTTCGTGAATACGCCAAGGTAATGATGACGGATGGTGTT
CTTGAAACGTTTCTCGGAGAGATCTTCGGAGCGGTTCTCGAAACGGTTCT
CACGAGTCGGTGCCCTACGAAAGAGAAGGTGGCGAGGGGTTCACTTGCTT
GTGGAGCGCGACACTCTCTGAGAGTGGCTAAATTTACCCGAAGCTTCTTA
AGCTGGTATGTACGTGGAACACATTCGTCAGCTTGCTCTCACGAATATAT
ATATTTTTTTCATGGAGGACAACGAAAAAGGGCGGTTAGGTTTACCTGGT
GCACGCAGTGTCTCTTTCTCGCACACCGTGTTGTAACCTGTCTGTTTGCA
TGTTTTCATCACTCTGTTAGGCAAATTCTTGTATTTGGCGTGTTTGGTGG
GACTGATTGTAACTATTTACAAGCAGTGGGTTGTTCCGGTTCCTCTGTTC
GCTGTTCACTCCGCCAGGATATTGACTACATTGGACTGACACAAAGTGGC
CGGCTGGTGATCAAACTTCCGAAACTCTTCGTCGAAGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig6117:3774..12912-

>mRNA_H-paniculata_contig6117.13822.1 ID=mRNA_H-paniculata_contig6117.13822.1|Name=mRNA_H-paniculata_contig6117.13822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1056bp|location=Sequence derived from alignment at H-paniculata_contig6117:3774..12912- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGCGGTAGTGCTCGCGTACGAAGATGGAGCGAGACTATACCCGCTGAC
ACAGGACTACCCCGCTACTTTGCTTCCCGTGCTCAACAAGCCGCTGCTCC
ACTACCAGCTAGAGCTTTTGGAGAAGGCGGGCTACTCGGAAGGCGGTAGT
GCTCGCGTACGAAGATGGAGCGAGACTATACCCGCTGACACAGGACTACC
CCGCTACTTTGCTTCCCGTGCTCAACAAGCCGCTGCTCCACTACCAGCTA
GAGCTTTTGGAGAAGGCGGGCTACTCGGAGGCCCTCGTGGTGTGTTCCCG
GGTCACCGAGGCTCCGGTATCAAAATTCAAGGAGACTTTCACTGGGGCGC
TAAGCATCGCTATTGTGGTCATCAACGGGTCCCCCGACACAGCCGAGGTG
CTTCGTCACGTGTCGGACAGGATAAGAGGCCCTCGTGGTGTGTTCCCGGG
TCACCGAGGCTCCGGTATCAAAATTCAAGGAGACTTTCACTGGGGCGCTA
AGCATCGCTATTGTGGTCATCAACGGGTCCCCCGACACAGCCGAGGTGCT
TCGTCACGTGTCGGACAGGATAAGGAGCGACTTTTTGCTGTTGCCGGGAG
ATTTGGTCTGCGAGCAGGTGCTGAGCGACCTTGCTGAGGAGCGACTTTTT
GCTGTTGCCGGGAGATTTGGTCTGCGAGCAGGTGCTGAGCGACCTTGCTG
AGTTACACGTCTCGAGACTCTCGGACGTGACGATGCTCGTTAAGGAAGAG
GCGCCGGTTAAAGACTCCAAGGGGCGGAAGACAGTACGGCCCAAGCGGGA
TGAAGAGTTACACGTCTCGAGACTCTCGGACGTGACGATGCTCGTTAAGG
AAGAGGCGCCGGTTAAAGACTCCAAGGGGCGGAAGACAGTACGGCCCAAG
CGGGATGAAGAGGATATTGACTACATTGGACTGACACAAAGTGGCCGGCT
GGTGATCAAACTTCCGAAACTCTTCGTCGAAGAGGATATTGACTACATTG
GACTGACACAAAGTGGCCGGCTGGTGATCAAACTTCCGAAACTCTTCGTC
GAAGAG
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