prot_H-paniculata_contig6077.13764.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6077.13764.1
Unique Nameprot_H-paniculata_contig6077.13764.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length277
Homology
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BLAST of mRNA_H-paniculata_contig6077.13764.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 4.020e-12
Identity = 67/212 (31.60%), Postives = 94/212 (44.34%), Query Frame = 0 
Query:   68 LLETKHLEDGRTLLMFAAVLGKTTAFKQVALSIRRKVGVFALVRQLRDSDAHGAPLLFQASSHSSNVECFKAACQMXXXXXXXXXXXXXXXXXXXXXXXXQMRAAA-SGSFTVFHAVEELMKMMGNQTFIKRTRDQKYREEEKYDNMRRTLLHHAAAGGCAQTLKSVSEVVKRSSIDWCATLCEE-------------DRQGVTPVMLLLGK 265
            +L  + + D R+LL +AA LGK + F+ +AL +R K+GV  LV QLR+    GAPLLFQA +     ECFKA  ++                         M  A  +GS  VF +   L+K + +       R Q        D   RTL+HHAA G   + L  V EVV R+ + W     +              DR G +P +  LG+
Sbjct:  237 VLSARDVMDRRSLLEYAAALGKASHFEDLALWLRWKLGVGGLVNQLREPGVDGAPLLFQAVNID---ECFKAVTKVLLDTLGAGGVAQQIRATDQKGMTLLMHVARFAGSVEVFSSALHLVKTLTS-------RQQGLCHLRARDAEGRTLVHHAAEGRTEEMLPKVMEVVSRADL-WVIDESDSESTDLRQYLSTRTDRHGRSPALCALGR 437
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BLAST of mRNA_H-paniculata_contig6077.13764.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.330e-11
Identity = 73/270 (27.04%), Postives = 110/270 (40.74%), Query Frame = 0 
Query:   37 RKIVEDGARNIEQELEELEKNDQRG-QLLVATLLETKHLEDGRTLLMFAAVLGKTTAFKQVALSIRRKVGVFALVRQLRDSDAHGAPLLFQASSHSSNVECFKAACQMXXXXXXXXXXXXXXXXXXXXXXXXQMRAAASGSFTVFHAVEELMKMMGNQTFI-------------------------KRTRDQKYREEEK-------------YDNMRRTLLHHAAAGGCAQTLKSVSEVVKRSSIDWCATLCEEDRQGVTPVMLLLGKSY 267
            R+ + D  +++E+ LEE++K    G + L+   L++K  EDG+ +L++AA  G  T    +   IR +VG+ ALV++LR++D  G PLLF A+S      CF+ A  +                         M AA S     F  V +  +       +                         +R  D   +  EK              D    T LHHAA  G ++ L    EVVK     W A L   DR G TP+ML+L  ++
Sbjct:   12 RRCIRDPEKDVEKGLEEVQKEVGEGLESLLDEALQSKWPEDGQNVLLYAAAQGNQTWLLGLVDLIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKHCCFRIAYDLVFTVLGKGGVIEQFEALDGLGRGILMHAARSNHVDTFKDVFDKCRKAAESVRLHDQSNAVANDGRIEIPEVPLYGFRGERPSDSTTQTPEKSSNSLLLREVLGTVDRKGMTCLHHAAEAGSSEVL---CEVVKECGSHW-ADLGASDRSGRTPIMLVLRNAF 277
[Close]
BLAST of mRNA_H-paniculata_contig6077.13764.1 vs. uniprot
Match: A0A6H5K219_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K219_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.690e-7
Identity = 58/195 (29.74%), Postives = 84/195 (43.08%), Query Frame = 0 
Query:   68 LLETKHLEDGRTLLMFAAVLGKTTAFKQVALSIRRKVGVFALVRQLRDSDAHGAPLLFQASSHSSNVECFKAACQMXXXXXXXXXXXXXXXXXXXXXXXX-------QMRAA-------------ASGSFTVFHAVEELMKMMGNQTFIKRTRDQKYREEEKYDNMRRTLLHHAAAGGCAQTLKSVSEVVKRSSI 242
            +L  + + D R++L +AA LGK + F+ +A  +R K+GV +LV QLR+    GAPLLFQA +     ECFKA  +                                Q+RA              ++GS  VF +   L+K + +       R Q        D   RTL HHAA G   + L  V EVV ++ +
Sbjct:  193 VLSARDVMDRRSILEYAAALGKASHFEDLARWLRWKLGVGSLVNQLREPGVDGAPLLFQAVNVD---ECFKAVTKASPLGKPPCRASRTSNYHRVLLDTLGAGGVAQQIRATDQKGMTLLMHVARSAGSVEVFSSALHLVKTLSS-------RQQGLCHLRARDAEGRTLAHHAAEGRTEEMLPKVMEVVSQADL 377
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6077.13764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMR2_ECTSI4.020e-1231.60Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LHA0_ECTSI1.330e-1127.04Transient Receptor Potential Channel. Partial sequ... [more]
A0A6H5K219_9PHAE1.690e-729.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..64
NoneNo IPR availableCOILSCoilCoilcoord: 196..216
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 30..268
e-value: 5.2E-7
score: 31.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6077contigH-paniculata_contig6077:1362..3215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6077.13764.1mRNA_H-paniculata_contig6077.13764.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6077 1357..3215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6077.13764.1 ID=prot_H-paniculata_contig6077.13764.1|Name=mRNA_H-paniculata_contig6077.13764.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
MASGNFMRKREGSMLGSFSAIMSVSKRVLETELKKARKIVEDGARNIEQE
LEELEKNDQRGQLLVATLLETKHLEDGRTLLMFAAVLGKTTAFKQVALSI
RRKVGVFALVRQLRDSDAHGAPLLFQASSHSSNVECFKAACQMLESTVGV
GGLMEQLRAVDRKGKSLQMRAAASGSFTVFHAVEELMKMMGNQTFIKRTR
DQKYREEEKYDNMRRTLLHHAAAGGCAQTLKSVSEVVKRSSIDWCATLCE
EDRQGVTPVMLLLGKSYPGGDQTGILQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf