prot_H-paniculata_contig6055.13735.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6055.13735.1
Unique Nameprot_H-paniculata_contig6055.13735.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length218
Homology
[Close]
BLAST of mRNA_H-paniculata_contig6055.13735.1 vs. uniprot
Match: D7FPT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT8_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 8.010e-30
Identity = 67/129 (51.94%), Postives = 84/129 (65.12%), Query Frame = 0 
Query:   91 PTDRNSGAVGRPPQRSKADLSKLFATPEPVVGTGLPLA---RVFSRGAQSSFGSLPIFVAMCALCAKFAPAIALQSAVAWGVGRVVYWRSMREADVSQRLPAGLVGYMTMFLFLGGLSFLNGLKAIALL 216
            P    + A G  P+  KAD SKLFA PEP    G PLA   R F+  AQ S  S P+F+ M  L + F+P +A QS VAWG+GR  YW SMR  DVS+R+PAG VGY ++FL +GGL+F+NGLK I+ L
Sbjct:   89 PAAAGTAAWGAKPR--KADWSKLFAAPEPEPVQGRPLAVLSRSFAGAAQGSCYSSPLFLGMSLLLSLFSPIVAAQSLVAWGLGRATYWLSMRGEDVSRRMPAGFVGYASLFLVVGGLAFMNGLKGISAL 215
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6055.13735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPT8_ECTSI8.010e-3051.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023352Membrane associated eicosanoid/glutathione metabolism-like domain superfamilyGENE3D1.20.120.550coord: 96..216
e-value: 3.1E-6
score: 28.7
IPR023352Membrane associated eicosanoid/glutathione metabolism-like domain superfamilySUPERFAMILY161084MAPEG domain-likecoord: 128..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..207
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 208..217
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.851
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 188..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6055contigH-paniculata_contig6055:2212..3487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6055.13735.1mRNA_H-paniculata_contig6055.13735.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6055 895..3787 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6055.13735.1 ID=prot_H-paniculata_contig6055.13735.1|Name=mRNA_H-paniculata_contig6055.13735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
MVSANSMNKNIMMVLLCVVALARTATSFVPIACPATTGAMATPRGQRTLV
FDNMQQVLVRTRGERSGSFGVTGDTTSTTTATFPSWLPSPPTDRNSGAVG
RPPQRSKADLSKLFATPEPVVGTGLPLARVFSRGAQSSFGSLPIFVAMCA
LCAKFAPAIALQSAVAWGVGRVVYWRSMREADVSQRLPAGLVGYMTMFLF
LGGLSFLNGLKAIALLA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023352MAPEG-like_dom_sf