prot_H-paniculata_contig6048.13727.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6048.13727.1
Unique Nameprot_H-paniculata_contig6048.13727.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length162
Homology
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BLAST of mRNA_H-paniculata_contig6048.13727.1 vs. uniprot
Match: A0A6H5JR94_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR94_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.110e-27
Identity = 54/91 (59.34%), Postives = 69/91 (75.82%), Query Frame = 0 
Query:   29 NESNVVHSVNYVLDLFITAYFQFDTKGEGYITKKVVENMLRQSERESGTSDFMDQRRWRQLAWNDDRLSFQEFMYGFAQWLGLLEDEDDFS 119
            NE +V  SV YVLDLFI AYFQFD +G G+ITK  +E  LR+SE E G S  +D++RW + AW+ DRLSFQEF+Y F+ WLGLLED+ D++
Sbjct:  371 NEVDVSMSVKYVLDLFIAAYFQFDKEGRGFITKSTIEKTLRKSENEPGVSGLLDKKRWSEAAWDGDRLSFQEFIYAFSLWLGLLEDDVDYN 461
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BLAST of mRNA_H-paniculata_contig6048.13727.1 vs. uniprot
Match: A0A835YSL5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.960e-6
Identity = 37/111 (33.33%), Postives = 57/111 (51.35%), Query Frame = 0 
Query:   18 GGSPRSKKLVGNESNVVHSVNYVLDLFITAYFQ--------------FDTKGEGYITKKVVENMLRQSERESGTSD-----FMDQRRWRQLAWNDDRLSFQEFMYGFAQWL 109
            GG+P   K   +    V  + YVLDL I AYFQ              FD+K EG+I+++ +E  L  +E   G+       F+ + +W+ L   D +LSFQ+F+Y F+ W+
Sbjct:  283 GGAPAESKR--DRRGNVQELRYVLDLIIAAYFQXXXXXXXXXXXXXXFDSKVEGFISRRRLEQQLEGAEGLQGSEPSTHGTFLYEEQWQSLWGPDGKLSFQDFVYIFSSWI 391
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6048.13727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JR94_9PHAE2.110e-2759.34EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YSL5_9STRA2.960e-633.33EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 42..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6048contigH-paniculata_contig6048:274..6009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6048.13727.1mRNA_H-paniculata_contig6048.13727.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6048 194..9317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6048.13727.1 ID=prot_H-paniculata_contig6048.13727.1|Name=mRNA_H-paniculata_contig6048.13727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
MTKARSTGHSGEGELPGGGSPRSKKLVGNESNVVHSVNYVLDLFITAYFQ
FDTKGEGYITKKVVENMLRQSERESGTSDFMDQRRWRQLAWNDDRLSFQE
FMYGFAQWLGLLEDEDDFSSVWSSSLSQSQRPLLAVDDINPTATAAADES
KTVAVAGKEVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair