mRNA_H-paniculata_contig5999.13659.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: D7FUN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN6_ECTSI) HSP 1 Score: 505 bits (1301), Expect = 1.920e-166 Identity = 276/423 (65.25%), Postives = 317/423 (74.94%), Query Frame = 1
Query: 1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITW-----PFGGXXXXXXXXXXXKTRRRPIGTGASP----------VPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDG-GDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDRE 1221
P+LPL +H+ YRREVTEDLFHACLNARLSKTAMRDRPPFLTASS +TP T+A+LSTVQL+VT+LDG LPRAM+AVLTEVHR+KVHGFSDRE+S+AK+NHLAE+RGEWVARDQTDSN LC +Y+EHFLR+NP PGI+WEAGVL PLLETV T DVN VAER A C LQ WL ET P +++ PF G +R G G SP +PA+G G GVPT++DLL+++GRFEER GG G GR R+GSWERVREWSHDRWGE LEVEDLLPDYL G E A + + G G+I VHE+ L NG+QV+YK T+FCDDEVLFSG+A+GGRTEL D+APSALMSVTVAEELGIFG+KPSKAMDMLTGKRVSLGLSIEAYDRE
Sbjct: 297 PALPLTTHDHYRREVTEDLFHACLNARLSKTAMRDRPPFLTASS---STPVTVATLSTVQLMVTALDGALPRAMRAVLTEVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRRNPAPGIDWEAGVLAPLLETVGTGDVNEVAERLA----------C--------LQNWLSETLPQSLSSAAAASPFRGSFLGSVFPFLEGKKRIRFG-GDSPARGGDGATATLPAAG-GGTGGVPTKEDLLEVMGRFEERGGGGG--VGRGRMGSWERVREWSHDRWGEPLEVEDLLPDYLAVGDRPAEPAAGWSPVKVLGPGDGEIQVHEIILPNGMQVSYKVTDFCDDEVLFSGIAHGGRTELCADRAPSALMSVTVAEELGIFGVKPSKAMDMLTGKRVSLGLSIEAYDRE 694
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A7J7L6L3_9MAGN (PITH domain-containing protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A7J7L6L3_9MAGN) HSP 1 Score: 169 bits (427), Expect = 3.680e-42 Identity = 119/397 (29.97%), Postives = 180/397 (45.34%), Query Frame = 1
Query: 28 DYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
DYR + E +FH LN R K + R PP+ + SS A + + + + + G A++++L E+ RV++HGFS+RE+S + ++E+ ++ RDQ S +L EYL+HFLR PV GIE+E + +L + +V+R+AE + + V+ P P + T DDL +V + L ++ W + E E+ + LPD + V Q+ E DI V E+ L+NG++V YKCT+F DD+VLF+G GG +ELP ++ S MS T+A E+GIFG KPS MDML GKR +G + AY R
Sbjct: 304 DYRNTLAELMFHCALNQRYYKISRRKDPPYFSCSS---TADAFVRPIKAYMMSASCKEKGTVDALESMLMEIARVRLHGFSEREISTVRALMMSEIESAYLERDQMQSTSLRDEYLQHFLRDEPVIGIEFETKLQKTILPQISAAEVSRLAENFRTSCSCVIKTVEPQP-----------------------------------------------------------LATIDDLKSVVLKVNN-------------LEEERKISPWDDEHIPE--EIVNTLPDPGV-----------VVQQSE---FPDIGVSELLLSNGMRVCYKCTDFLDDQVLFTGFTYGGLSELPENEYISCSMSSTIAGEIGIFGYKPSILMDMLAGKRAEVGTKVGAYMR 609
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A835IEL2_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IEL2_9MAGN) HSP 1 Score: 165 bits (417), Expect = 6.360e-41 Identity = 118/397 (29.72%), Postives = 178/397 (44.84%), Query Frame = 1
Query: 28 DYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
DYR + E +FH LN R K + R PP+ + SS + + ++ + T + G A++++L E+ RV++HGF++RE+S + ++E+ ++ RDQ S +L EYL+HFLR PV GIE+EA + +L + +V++ AE Y + VV P T DDL V R+ + + W + E E+ +PD GS + Q+ E G VHE+ L+NG++V YKCT+F DD+VLFSG GG +E+P D+ S M+ T+A E+G+FG KP+ MDML GKR +G I AY R
Sbjct: 302 DYRDSLVESMFHCALNQRYFKISRRKDPPYFSCSS---SADVFVRTVKAYMMTATCKESGTVEALESMLMEIARVRLHGFTEREISTVRALLMSEIESAYLERDQMQSTSLRDEYLQHFLRNEPVVGIEFEAKLQKTILPQISASEVSKYAENYRTSCSCVVKTVEPQIHA-----------------------------------------------------------TIDDLK-------------ASVLNVNRIEKEKMISPWDEEHIPE--EIVSTMPDP----GS-------IVQQLEFPSVG---VHELLLSNGMRVCYKCTDFLDDQVLFSGFTYGGLSEVPEDEHFSCSMASTIAGEIGVFGYKPTVLMDMLAGKRAEVGTKIGAYMR 607
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: UPI001CB8E573 (zinc protease PQQL-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8E573) HSP 1 Score: 163 bits (413), Expect = 2.330e-40 Identity = 118/406 (29.06%), Postives = 187/406 (46.06%), Query Frame = 1
Query: 1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
P + L + DYR + E +F+ +N R K + + PP+ + S V + + + + + G A++++LTE+ RV++HGFSDRE+S+A+ + ++E+ ++ RDQ S +L EYL HFLR PV G+E+EA + L + +V++ +E + N V+ A P + V T DDL +IV ++ S E R S+ W E D +P+ ++T V QE E ++ I E+ L+NG++V YKCT+F D+VLF+G A GG +ELP + S M T+A E+G+FG +PS +DML GKR +G + AY R
Sbjct: 295 PVVELRTVKDYRDLLVEAMFYHAMNQRFFKISRKKDPPYFSCS---VAADVVVQPIKAYIMTSSCKEKGTLNALESMLTEIARVRLHGFSDREISVARASMMSEIESAYLERDQVQSTSLREEYLHHFLRHEPVVGVEYEAQLQKTTLPHISASEVSKYSENFRTTHNCVIKAIEP-----------------------------------------------------------QAVATVDDLKNIV----------------LKINSLEEDRSISY--WDE-----DHIPEEIVT---TKPNPGSVVQESEYSN---IGATELILSNGMRVCYKCTDFLQDQVLFTGYAYGGLSELPETEYISCSMGSTIAGEIGVFGYRPSMLLDMLAGKRAEVGTKLGAYMR 609
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A0D6R038_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R038_ARACU) HSP 1 Score: 160 bits (406), Expect = 1.960e-39 Identity = 112/406 (27.59%), Postives = 181/406 (44.58%), Query Frame = 1
Query: 1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
P + + DYR V E +FH+ LN R K + + PPF + SS T + + + + +GG A++++L EV RV+VHGF++RE+++ + +A++ ++ RDQ S +L EYL+HFL PV GIE+EA + LL + +V+R AE + + V+ P T +D+ IV + + G G + W+ E+ +PD +++ + D +++ + + E+ L+NG+++ YKCT+F DD+VLFSG GG +E+P S M T+A E+G+FG KPS MDML GKR +G + AY R
Sbjct: 295 PFTEMKTIRDYRESVAEGMFHSALNQRFFKISRQRDPPFFSCSSA---TDVLVKPVRAYMMTASCKEGGTIEALESILIEVARVRVHGFTEREIAIVRALLIADIESAYLERDQMQSTSLRDEYLQHFLHGEPVVGIEYEAQLQKTLLPHISAAEVSRFAENFQTSCSCVIKTVEP-----------------------------------------------------------RACATVEDVKAIVSKIQTLQDG-GSIP------PWD----------------EEHIPDEIVS------RKPDPGDIISKSEFPEFEATELVLSNGMKICYKCTDFLDDQVLFSGFTYGGLSEVPESDYLSCSMGSTIAGEIGMFGYKPSILMDMLAGKRAEVGTKVGAYMR 609
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A804K359_MUSAM (Uncharacterized protein n=3 Tax=Musa TaxID=4640 RepID=A0A804K359_MUSAM) HSP 1 Score: 160 bits (405), Expect = 2.660e-39 Identity = 113/397 (28.46%), Postives = 175/397 (44.08%), Query Frame = 1
Query: 28 DYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
DYR + E +FH LN R K + R PP+ + SS A + + + + + G A++A+LTEV RV++HGFS+RE+S+ + ++E+ ++ R+Q S +L EYL+HF R+ PV G+E+EA + LL + +V++ A + TC K+ P +G T DDL V + L R+ W + E + + +P ++ + D I V E+ L+NG++V YKCT+F DD+V+F+G A GG +ELP + S M T++ E+GIFG KPS MDML GKR + + AY R
Sbjct: 307 DYRDSLAEAMFHCALNQRFFKISRRTDPPYFSCSSAA---DALVRPVKAYIMTSSCRERGTIEALEAMLTEVARVRLHGFSEREISIVRALMMSEIESAYLEREQMQSTSLRDEYLQHFFRKEPVVGVEYEAQLQKTLLPHISPAEVSKFAANFC--------TTCSCVIKIVE--------------------------------------------PRAGA-------TLDDLRAAVFKIST-------------LEEERRISPWDDEHVPEEIVTDKPIPGSIIN----------------QIDFSPIGVTELLLSNGMKVCYKCTDFLDDQVIFTGFAYGGLSELPEAEYISCSMGSTISGEIGIFGYKPSMLMDMLAGKRAEVSTKVGAYMR 612
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A446PQI3_TRITD (Peptidase_M16_C domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446PQI3_TRITD) HSP 1 Score: 158 bits (399), Expect = 7.740e-39 Identity = 113/407 (27.76%), Postives = 185/407 (45.45%), Query Frame = 1
Query: 1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCP-APRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
P+ + + DYR + E +FH LN RL K + R PP+ + SS A + + + + + G A++++L EV R +++GFS+RE+S+ + ++E+ ++ RDQ S +L EYL+HFLR+ PV GIE+EA + LL + + +V + AE ++ + V+ P A L L+ +++ V EE+ + W ++ E + + +P ++ ++ E+ G I EM L+NG++V YKCT+F DD+V+F+G A GG +EL D+ S M T+A E+GIFG +PS MDML GKR +G + AY R
Sbjct: 2 PAGEIKTVKDYRDSLAESIFHCALNQRLFKLSRRRDPPYFSCSSAA---DALVRPVKAYIMTSSCREKGTVEALESMLVEVARARLYGFSEREISIVRALMMSEIESAYLERDQMQSTSLRDEYLQHFLREEPVVGIEYEARLQKTLLPYISSAEVVKFAENFSTTSSCVIKIVEPRAHASLEDLKAVVLK---------------------------------------------------------VNTLEEK----------------RSIPPWEEEQIPEEIVSQSPVPGRIIV-------------DKVEHPG--IGATEMILSNGMRVCYKCTDFLDDQVVFTGFAYGGLSELSEDEYTSCTMGSTIAGEIGIFGYRPSVLMDMLAGKRAEVGTKVGAYMR 317
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A5N6M685_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M685_9ASTR) HSP 1 Score: 159 bits (402), Expect = 8.320e-39 Identity = 112/406 (27.59%), Postives = 188/406 (46.31%), Query Frame = 1
Query: 1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
P + L + DY+ + E +F+ +N R K + + PP+ + S V A + + + + + G A++++LTE+ RV++HGFS+RE+S+A+ ++E+ ++ RDQ S +L EYL HFLR+ PV GIE+EA + +L + +V++ +E + ++ V+ P V T DDL +V + + + D G + W+ ED +P+ ++T V QE E ++ I+ E+ L+NG++V YKCT+F +D+VLF+G A GG +ELP + S T+A E+G+FG +PS +DML GKR +G + AY R
Sbjct: 1370 PVIELRTVKDYKDLLVEAMFYHAMNQRFFKISRKKDPPYFSCS---VAADAVVQPVKAYIMTSSCKEKGTLNALESMLTEIARVRLHGFSEREISVARAMMVSEIESAYLERDQVQSTSLREEYLHHFLRKEPVVGIEYEAQLQKTILPNISASEVSKYSENFRTTRSCVIKTIEP-----------------------------------------------------------RAVATVDDLKTVVLKIDS----LEDDGG---------ISPWN----------EDHIPEEIVT---LKPNPGSVVQESEYSN---IEATELILSNGMRVCYKCTDFLEDQVLFTGYAYGGLSELPESEYISCSTGSTIAGEIGVFGYRPSMLLDMLAGKRAEIGTKLGAYMR 1684
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A5P1EWU3_ASPOF (Uncharacterized protein n=3 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EWU3_ASPOF) HSP 1 Score: 158 bits (400), Expect = 1.210e-38 Identity = 113/406 (27.83%), Postives = 181/406 (44.58%), Query Frame = 1
Query: 1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
P + + DYR + E +FH LN RL K + R PP+ + SS + A + + + + +GG A++++L EV RV++HGFSDRE+S+ + ++E+ ++ RDQ S +L EYL+HF + P+ GI++EA + +L + + +V+R A ++ + V+ P R +E +A+ L + EER S W + E+++ D GG + Q+ E I E+ L+NG+++ YKCT+F DD+++F+G A GG +EL D+ S M T+A E+G FG KPS MDML GKR + I AY R
Sbjct: 296 PDYEMRTVRDYRDSLAESMFHCALNQRLFKLSRRKDPPYFSCSS---SADALVKPVKAYIMTSSCREGGTVDALESMLMEVARVRLHGFSDREISIVRALMMSEIESAYLERDQMQSTSLRDEYLQHFFHKEPIIGIDYEAQLQKTILPHISSMEVSRFAMKFCTACSCVIKIVEPQARAT-------LEDLKAAV------------------------------------------------LKVNALEEER----------------------SIPPWDDENVPEEIVVDKPTPGG--------IVQQSEYPS---IGATELLLSNGMKICYKCTDFLDDQIIFTGFAYGGLSELSEDEYMSCSMGSTIAGEIGAFGYKPSVLMDMLAGKRAEVSTKIGAYMR 610
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: U5CZ01_AMBTC (Uncharacterized protein n=4 Tax=Magnoliopsida TaxID=3398 RepID=U5CZ01_AMBTC) HSP 1 Score: 158 bits (399), Expect = 1.610e-38 Identity = 114/406 (28.08%), Postives = 182/406 (44.83%), Query Frame = 1
Query: 1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
P + + DYR + E +FH L+ RL K A R PPF + S + + + T +GG+ A++++L EV RV++HGFS+RE+S+ + ++E+ ++ RDQ S +L EYL+HF R+ PV GIE+EA + +L + ++V+ AE + + V+ P R +E +A++ S + +P DD E + E E+ + PD D+ Q+ ++ V E+ ++NG++V YKCT+F DD+VLF+G + GG +EL + S M T+A E+G+FG KPS MDML GKR +G + AY R
Sbjct: 296 PVFEMKTVKDYRDSLAEAMFHCALSQRLFKIARRKDPPFFSCGSAA---DVLIRPVKACIVTSTCKEGGIIEALESMLLEVARVRLHGFSEREISVVRALMMSEIESAYLERDQMQSTSLRDEYLQHFFRKEPVVGIEYEAQLQKTILPHISAKEVSSFAENFRSTCSCVIKIVEPRARST-------IEDLKAAVS------------------------------KISSMEECGAIPDWDD---------------------------EHIPE----------EIVSVKPD-----------PGDIVQQ---TSFPNVGVTELVMSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELSESEYLSCSMGSTIAGEIGVFGYKPSILMDMLAGKRAEVGTKVGAYLR 610 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5999.13659.1 >prot_H-paniculata_contig5999.13659.1 ID=prot_H-paniculata_contig5999.13659.1|Name=mRNA_H-paniculata_contig5999.13659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPback to top mRNA from alignment at H-paniculata_contig5999:517..12975+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5999.13659.1 ID=mRNA_H-paniculata_contig5999.13659.1|Name=mRNA_H-paniculata_contig5999.13659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12459bp|location=Sequence derived from alignment at H-paniculata_contig5999:517..12975+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5999:517..12975+ >mRNA_H-paniculata_contig5999.13659.1 ID=mRNA_H-paniculata_contig5999.13659.1|Name=mRNA_H-paniculata_contig5999.13659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2442bp|location=Sequence derived from alignment at H-paniculata_contig5999:517..12975+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |