mRNA_H-paniculata_contig5999.13659.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5999.13659.1
Unique NamemRNA_H-paniculata_contig5999.13659.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: D7FUN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN6_ECTSI)

HSP 1 Score: 505 bits (1301), Expect = 1.920e-166
Identity = 276/423 (65.25%), Postives = 317/423 (74.94%), Query Frame = 1
Query:    1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITW-----PFGGXXXXXXXXXXXKTRRRPIGTGASP----------VPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDG-GDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDRE 1221
            P+LPL +H+ YRREVTEDLFHACLNARLSKTAMRDRPPFLTASS   +TP T+A+LSTVQL+VT+LDG LPRAM+AVLTEVHR+KVHGFSDRE+S+AK+NHLAE+RGEWVARDQTDSN LC +Y+EHFLR+NP PGI+WEAGVL PLLETV T DVN VAER A          C        LQ WL ET P +++      PF G             +R   G G SP          +PA+G G   GVPT++DLL+++GRFEER GG G   GR R+GSWERVREWSHDRWGE LEVEDLLPDYL  G    E A   +  +    G G+I VHE+ L NG+QV+YK T+FCDDEVLFSG+A+GGRTEL  D+APSALMSVTVAEELGIFG+KPSKAMDMLTGKRVSLGLSIEAYDRE
Sbjct:  297 PALPLTTHDHYRREVTEDLFHACLNARLSKTAMRDRPPFLTASS---STPVTVATLSTVQLMVTALDGALPRAMRAVLTEVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRRNPAPGIDWEAGVLAPLLETVGTGDVNEVAERLA----------C--------LQNWLSETLPQSLSSAAAASPFRGSFLGSVFPFLEGKKRIRFG-GDSPARGGDGATATLPAAG-GGTGGVPTKEDLLEVMGRFEERGGGGG--VGRGRMGSWERVREWSHDRWGEPLEVEDLLPDYLAVGDRPAEPAAGWSPVKVLGPGDGEIQVHEIILPNGMQVSYKVTDFCDDEVLFSGIAHGGRTELCADRAPSALMSVTVAEELGIFGVKPSKAMDMLTGKRVSLGLSIEAYDRE 694          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A7J7L6L3_9MAGN (PITH domain-containing protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A7J7L6L3_9MAGN)

HSP 1 Score: 169 bits (427), Expect = 3.680e-42
Identity = 119/397 (29.97%), Postives = 180/397 (45.34%), Query Frame = 1
Query:   28 DYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            DYR  + E +FH  LN R  K + R  PP+ + SS      A +  +    +  +  + G   A++++L E+ RV++HGFS+RE+S  +   ++E+   ++ RDQ  S +L  EYL+HFLR  PV GIE+E  +   +L  +   +V+R+AE +    + V+    P P                                                           + T DDL  +V +                L    ++  W  +   E  E+ + LPD  +           V Q+ E     DI V E+ L+NG++V YKCT+F DD+VLF+G   GG +ELP ++  S  MS T+A E+GIFG KPS  MDML GKR  +G  + AY R
Sbjct:  304 DYRNTLAELMFHCALNQRYYKISRRKDPPYFSCSS---TADAFVRPIKAYMMSASCKEKGTVDALESMLMEIARVRLHGFSEREISTVRALMMSEIESAYLERDQMQSTSLRDEYLQHFLRDEPVIGIEFETKLQKTILPQISAAEVSRLAENFRTSCSCVIKTVEPQP-----------------------------------------------------------LATIDDLKSVVLKVNN-------------LEEERKISPWDDEHIPE--EIVNTLPDPGV-----------VVQQSE---FPDIGVSELLLSNGMRVCYKCTDFLDDQVLFTGFTYGGLSELPENEYISCSMSSTIAGEIGIFGYKPSILMDMLAGKRAEVGTKVGAYMR 609          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A835IEL2_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IEL2_9MAGN)

HSP 1 Score: 165 bits (417), Expect = 6.360e-41
Identity = 118/397 (29.72%), Postives = 178/397 (44.84%), Query Frame = 1
Query:   28 DYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            DYR  + E +FH  LN R  K + R  PP+ + SS   +    + ++    +  T  + G   A++++L E+ RV++HGF++RE+S  +   ++E+   ++ RDQ  S +L  EYL+HFLR  PV GIE+EA +   +L  +   +V++ AE Y    + VV    P                                                               T DDL                V    R+   + +  W  +   E  E+   +PD     GS       + Q+ E    G   VHE+ L+NG++V YKCT+F DD+VLFSG   GG +E+P D+  S  M+ T+A E+G+FG KP+  MDML GKR  +G  I AY R
Sbjct:  302 DYRDSLVESMFHCALNQRYFKISRRKDPPYFSCSS---SADVFVRTVKAYMMTATCKESGTVEALESMLMEIARVRLHGFTEREISTVRALLMSEIESAYLERDQMQSTSLRDEYLQHFLRNEPVVGIEFEAKLQKTILPQISASEVSKYAENYRTSCSCVVKTVEPQIHA-----------------------------------------------------------TIDDLK-------------ASVLNVNRIEKEKMISPWDEEHIPE--EIVSTMPDP----GS-------IVQQLEFPSVG---VHELLLSNGMRVCYKCTDFLDDQVLFSGFTYGGLSEVPEDEHFSCSMASTIAGEIGVFGYKPTVLMDMLAGKRAEVGTKIGAYMR 607          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: UPI001CB8E573 (zinc protease PQQL-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8E573)

HSP 1 Score: 163 bits (413), Expect = 2.330e-40
Identity = 118/406 (29.06%), Postives = 187/406 (46.06%), Query Frame = 1
Query:    1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            P + L +  DYR  + E +F+  +N R  K + +  PP+ + S   V     +  +    +  +  + G   A++++LTE+ RV++HGFSDRE+S+A+ + ++E+   ++ RDQ  S +L  EYL HFLR  PV G+E+EA +    L  +   +V++ +E +    N V+ A  P                                                           + V T DDL +IV                 ++ S E  R  S+  W E     D +P+ ++T          V QE E ++   I   E+ L+NG++V YKCT+F  D+VLF+G A GG +ELP  +  S  M  T+A E+G+FG +PS  +DML GKR  +G  + AY R
Sbjct:  295 PVVELRTVKDYRDLLVEAMFYHAMNQRFFKISRKKDPPYFSCS---VAADVVVQPIKAYIMTSSCKEKGTLNALESMLTEIARVRLHGFSDREISVARASMMSEIESAYLERDQVQSTSLREEYLHHFLRHEPVVGVEYEAQLQKTTLPHISASEVSKYSENFRTTHNCVIKAIEP-----------------------------------------------------------QAVATVDDLKNIV----------------LKINSLEEDRSISY--WDE-----DHIPEEIVT---TKPNPGSVVQESEYSN---IGATELILSNGMRVCYKCTDFLQDQVLFTGYAYGGLSELPETEYISCSMGSTIAGEIGVFGYRPSMLLDMLAGKRAEVGTKLGAYMR 609          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A0D6R038_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R038_ARACU)

HSP 1 Score: 160 bits (406), Expect = 1.960e-39
Identity = 112/406 (27.59%), Postives = 181/406 (44.58%), Query Frame = 1
Query:    1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            P   + +  DYR  V E +FH+ LN R  K + +  PPF + SS    T   +  +    +  +  +GG   A++++L EV RV+VHGF++RE+++ +   +A++   ++ RDQ  S +L  EYL+HFL   PV GIE+EA +   LL  +   +V+R AE +    + V+    P                                                               T +D+  IV + +    G G +        W+                E+ +PD +++      +  D      +++  + +  E+ L+NG+++ YKCT+F DD+VLFSG   GG +E+P     S  M  T+A E+G+FG KPS  MDML GKR  +G  + AY R
Sbjct:  295 PFTEMKTIRDYRESVAEGMFHSALNQRFFKISRQRDPPFFSCSSA---TDVLVKPVRAYMMTASCKEGGTIEALESILIEVARVRVHGFTEREIAIVRALLIADIESAYLERDQMQSTSLRDEYLQHFLHGEPVVGIEYEAQLQKTLLPHISAAEVSRFAENFQTSCSCVIKTVEP-----------------------------------------------------------RACATVEDVKAIVSKIQTLQDG-GSIP------PWD----------------EEHIPDEIVS------RKPDPGDIISKSEFPEFEATELVLSNGMKICYKCTDFLDDQVLFSGFTYGGLSEVPESDYLSCSMGSTIAGEIGMFGYKPSILMDMLAGKRAEVGTKVGAYMR 609          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A804K359_MUSAM (Uncharacterized protein n=3 Tax=Musa TaxID=4640 RepID=A0A804K359_MUSAM)

HSP 1 Score: 160 bits (405), Expect = 2.660e-39
Identity = 113/397 (28.46%), Postives = 175/397 (44.08%), Query Frame = 1
Query:   28 DYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            DYR  + E +FH  LN R  K + R  PP+ + SS      A +  +    +  +  + G   A++A+LTEV RV++HGFS+RE+S+ +   ++E+   ++ R+Q  S +L  EYL+HF R+ PV G+E+EA +   LL  +   +V++ A  +          TC    K+                                              P +G        T DDL   V +                L    R+  W  +   E +  +  +P  ++                 + D   I V E+ L+NG++V YKCT+F DD+V+F+G A GG +ELP  +  S  M  T++ E+GIFG KPS  MDML GKR  +   + AY R
Sbjct:  307 DYRDSLAEAMFHCALNQRFFKISRRTDPPYFSCSSAA---DALVRPVKAYIMTSSCRERGTIEALEAMLTEVARVRLHGFSEREISIVRALMMSEIESAYLEREQMQSTSLRDEYLQHFFRKEPVVGVEYEAQLQKTLLPHISPAEVSKFAANFC--------TTCSCVIKIVE--------------------------------------------PRAGA-------TLDDLRAAVFKIST-------------LEEERRISPWDDEHVPEEIVTDKPIPGSIIN----------------QIDFSPIGVTELLLSNGMKVCYKCTDFLDDQVIFTGFAYGGLSELPEAEYISCSMGSTISGEIGIFGYKPSMLMDMLAGKRAEVSTKVGAYMR 612          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A446PQI3_TRITD (Peptidase_M16_C domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446PQI3_TRITD)

HSP 1 Score: 158 bits (399), Expect = 7.740e-39
Identity = 113/407 (27.76%), Postives = 185/407 (45.45%), Query Frame = 1
Query:    1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCP-APRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            P+  + +  DYR  + E +FH  LN RL K + R  PP+ + SS      A +  +    +  +  + G   A++++L EV R +++GFS+RE+S+ +   ++E+   ++ RDQ  S +L  EYL+HFLR+ PV GIE+EA +   LL  + + +V + AE ++   + V+    P A   L  L+  +++                                                         V   EE+                  +  W  ++  E +  +  +P  ++              ++ E+ G  I   EM L+NG++V YKCT+F DD+V+F+G A GG +EL  D+  S  M  T+A E+GIFG +PS  MDML GKR  +G  + AY R
Sbjct:    2 PAGEIKTVKDYRDSLAESIFHCALNQRLFKLSRRRDPPYFSCSSAA---DALVRPVKAYIMTSSCREKGTVEALESMLVEVARARLYGFSEREISIVRALMMSEIESAYLERDQMQSTSLRDEYLQHFLREEPVVGIEYEARLQKTLLPYISSAEVVKFAENFSTTSSCVIKIVEPRAHASLEDLKAVVLK---------------------------------------------------------VNTLEEK----------------RSIPPWEEEQIPEEIVSQSPVPGRIIV-------------DKVEHPG--IGATEMILSNGMRVCYKCTDFLDDQVVFTGFAYGGLSELSEDEYTSCTMGSTIAGEIGIFGYRPSVLMDMLAGKRAEVGTKVGAYMR 317          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A5N6M685_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M685_9ASTR)

HSP 1 Score: 159 bits (402), Expect = 8.320e-39
Identity = 112/406 (27.59%), Postives = 188/406 (46.31%), Query Frame = 1
Query:    1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            P + L +  DY+  + E +F+  +N R  K + +  PP+ + S   V   A +  +    +  +  + G   A++++LTE+ RV++HGFS+RE+S+A+   ++E+   ++ RDQ  S +L  EYL HFLR+ PV GIE+EA +   +L  +   +V++ +E +   ++ V+    P                                                             V T DDL  +V + +     + D  G         +  W+          ED +P+ ++T          V QE E ++   I+  E+ L+NG++V YKCT+F +D+VLF+G A GG +ELP  +  S     T+A E+G+FG +PS  +DML GKR  +G  + AY R
Sbjct: 1370 PVIELRTVKDYKDLLVEAMFYHAMNQRFFKISRKKDPPYFSCS---VAADAVVQPVKAYIMTSSCKEKGTLNALESMLTEIARVRLHGFSEREISVARAMMVSEIESAYLERDQVQSTSLREEYLHHFLRKEPVVGIEYEAQLQKTILPNISASEVSKYSENFRTTRSCVIKTIEP-----------------------------------------------------------RAVATVDDLKTVVLKIDS----LEDDGG---------ISPWN----------EDHIPEEIVT---LKPNPGSVVQESEYSN---IEATELILSNGMRVCYKCTDFLEDQVLFTGYAYGGLSELPESEYISCSTGSTIAGEIGVFGYRPSMLLDMLAGKRAEIGTKLGAYMR 1684          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: A0A5P1EWU3_ASPOF (Uncharacterized protein n=3 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EWU3_ASPOF)

HSP 1 Score: 158 bits (400), Expect = 1.210e-38
Identity = 113/406 (27.83%), Postives = 181/406 (44.58%), Query Frame = 1
Query:    1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            P   + +  DYR  + E +FH  LN RL K + R  PP+ + SS   +  A +  +    +  +  +GG   A++++L EV RV++HGFSDRE+S+ +   ++E+   ++ RDQ  S +L  EYL+HF  + P+ GI++EA +   +L  + + +V+R A ++    + V+    P  R         +E   +A+                                                L +    EER                      S   W +    E+++ D    GG        + Q+ E      I   E+ L+NG+++ YKCT+F DD+++F+G A GG +EL  D+  S  M  T+A E+G FG KPS  MDML GKR  +   I AY R
Sbjct:  296 PDYEMRTVRDYRDSLAESMFHCALNQRLFKLSRRKDPPYFSCSS---SADALVKPVKAYIMTSSCREGGTVDALESMLMEVARVRLHGFSDREISIVRALMMSEIESAYLERDQMQSTSLRDEYLQHFFHKEPIIGIDYEAQLQKTILPHISSMEVSRFAMKFCTACSCVIKIVEPQARAT-------LEDLKAAV------------------------------------------------LKVNALEEER----------------------SIPPWDDENVPEEIVVDKPTPGG--------IVQQSEYPS---IGATELLLSNGMKICYKCTDFLDDQIIFTGFAYGGLSELSEDEYMSCSMGSTIAGEIGAFGYKPSVLMDMLAGKRAEVSTKIGAYMR 610          
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Match: U5CZ01_AMBTC (Uncharacterized protein n=4 Tax=Magnoliopsida TaxID=3398 RepID=U5CZ01_AMBTC)

HSP 1 Score: 158 bits (399), Expect = 1.610e-38
Identity = 114/406 (28.08%), Postives = 182/406 (44.83%), Query Frame = 1
Query:    1 PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTPATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRNHLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLETVVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPFGGXXXXXXXXXXXKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGRFEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGSCDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGLANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLSIEAYDR 1218
            P   + +  DYR  + E +FH  L+ RL K A R  PPF +  S        +  +    +  T  +GG+  A++++L EV RV++HGFS+RE+S+ +   ++E+   ++ RDQ  S +L  EYL+HF R+ PV GIE+EA +   +L  +  ++V+  AE +    + V+    P  R         +E   +A++                                S +     +P  DD                           E + E          E+  + PD             D+ Q+       ++ V E+ ++NG++V YKCT+F DD+VLF+G + GG +EL   +  S  M  T+A E+G+FG KPS  MDML GKR  +G  + AY R
Sbjct:  296 PVFEMKTVKDYRDSLAEAMFHCALSQRLFKIARRKDPPFFSCGSAA---DVLIRPVKACIVTSTCKEGGIIEALESMLLEVARVRLHGFSEREISVVRALMMSEIESAYLERDQMQSTSLRDEYLQHFFRKEPVVGIEYEAQLQKTILPHISAKEVSSFAENFRSTCSCVIKIVEPRARST-------IEDLKAAVS------------------------------KISSMEECGAIPDWDD---------------------------EHIPE----------EIVSVKPD-----------PGDIVQQ---TSFPNVGVTELVMSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELSESEYLSCSMGSTIAGEIGVFGYKPSILMDMLAGKRAEVGTKVGAYLR 610          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5999.13659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUN6_ECTSI1.920e-16665.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7J7L6L3_9MAGN3.680e-4229.97PITH domain-containing protein n=2 Tax=Magnoliopsi... [more]
A0A835IEL2_9MAGN6.360e-4129.72Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]
UPI001CB8E5732.330e-4029.06zinc protease PQQL-like n=1 Tax=Erigeron canadensi... [more]
A0A0D6R038_ARACU1.960e-3927.59Uncharacterized protein n=1 Tax=Araucaria cunningh... [more]
A0A804K359_MUSAM2.660e-3928.46Uncharacterized protein n=3 Tax=Musa TaxID=4640 Re... [more]
A0A446PQI3_TRITD7.740e-3927.76Peptidase_M16_C domain-containing protein n=1 Tax=... [more]
A0A5N6M685_9ASTR8.320e-3927.59Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A5P1EWU3_ASPOF1.210e-3827.83Uncharacterized protein n=3 Tax=Asparagus officina... [more]
U5CZ01_AMBTC1.610e-3828.08Uncharacterized protein n=4 Tax=Magnoliopsida TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5999contigH-paniculata_contig5999:517..12975 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score505.8
Seed ortholog evalue1.9e-140
Seed eggNOG ortholog2880.D7FUN6
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.Belongs to the peptidase M16 family
EggNOG OGsCOG1025@1,KOG0959@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1221
Cds size1221
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5999.13659.1prot_H-paniculata_contig5999.13659.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5999 517..12975 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930662.9472473-CDS-H-paniculata_contig5999:516..6591622930662.9472473-CDS-H-paniculata_contig5999:516..659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 517..659 +
1691481395.081689-CDS-H-paniculata_contig5999:516..6591691481395.081689-CDS-H-paniculata_contig5999:516..659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 517..659 +
1622930662.9618852-CDS-H-paniculata_contig5999:1384..14811622930662.9618852-CDS-H-paniculata_contig5999:1384..1481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 1385..1481 +
1691481395.093086-CDS-H-paniculata_contig5999:1384..14811691481395.093086-CDS-H-paniculata_contig5999:1384..1481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 1385..1481 +
1622930662.9742274-CDS-H-paniculata_contig5999:4104..41431622930662.9742274-CDS-H-paniculata_contig5999:4104..4143Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 4105..4143 +
1691481395.1047163-CDS-H-paniculata_contig5999:4104..41431691481395.1047163-CDS-H-paniculata_contig5999:4104..4143Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 4105..4143 +
1622930662.9955833-CDS-H-paniculata_contig5999:4464..46701622930662.9955833-CDS-H-paniculata_contig5999:4464..4670Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 4465..4670 +
1691481395.1165273-CDS-H-paniculata_contig5999:4464..46701691481395.1165273-CDS-H-paniculata_contig5999:4464..4670Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 4465..4670 +
1622930663.0113065-CDS-H-paniculata_contig5999:6888..71791622930663.0113065-CDS-H-paniculata_contig5999:6888..7179Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 6889..7179 +
1691481395.1289916-CDS-H-paniculata_contig5999:6888..71791691481395.1289916-CDS-H-paniculata_contig5999:6888..7179Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 6889..7179 +
1622930663.0286446-CDS-H-paniculata_contig5999:7499..76481622930663.0286446-CDS-H-paniculata_contig5999:7499..7648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 7500..7648 +
1691481395.138156-CDS-H-paniculata_contig5999:7499..76481691481395.138156-CDS-H-paniculata_contig5999:7499..7648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 7500..7648 +
1622930663.0465705-CDS-H-paniculata_contig5999:9243..93141622930663.0465705-CDS-H-paniculata_contig5999:9243..9314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 9244..9314 +
1691481395.1469972-CDS-H-paniculata_contig5999:9243..93141691481395.1469972-CDS-H-paniculata_contig5999:9243..9314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 9244..9314 +
1622930663.062198-CDS-H-paniculata_contig5999:12750..129751622930663.062198-CDS-H-paniculata_contig5999:12750..12975Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 12751..12975 +
1691481395.1567595-CDS-H-paniculata_contig5999:12750..129751691481395.1567595-CDS-H-paniculata_contig5999:12750..12975Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5999 12751..12975 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5999.13659.1

>prot_H-paniculata_contig5999.13659.1 ID=prot_H-paniculata_contig5999.13659.1|Name=mRNA_H-paniculata_contig5999.13659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp
PSLPLVSHNDYRREVTEDLFHACLNARLSKTAMRDRPPFLTASSRQVNTP
ATLASLSTVQLVVTSLDGGLPRAMKAVLTEVHRVKVHGFSDREMSMAKRN
HLAEVRGEWVARDQTDSNTLCGEYLEHFLRQNPVPGIEWEAGVLGPLLET
VVTEDVNRVAERYAWGKNTVVFATCPAPRKLTRLQGWLVETFPSAITWPF
GGGGGGGGGGGTSKTRRRPIGTGASPVPASGIGVVEGVPTQDDLLDIVGR
FEERWGGVGDVTGRWRLGSWERVREWSHDRWGETLEVEDLLPDYLLTGGS
CDEKARDVAQEEEENDGGDIDVHEMKLANGLQVTYKCTNFCDDEVLFSGL
ANGGRTELPPDKAPSALMSVTVAEELGIFGIKPSKAMDMLTGKRVSLGLS
IEAYDRE
back to top

mRNA from alignment at H-paniculata_contig5999:517..12975+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5999.13659.1 ID=mRNA_H-paniculata_contig5999.13659.1|Name=mRNA_H-paniculata_contig5999.13659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12459bp|location=Sequence derived from alignment at H-paniculata_contig5999:517..12975+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCATCTCTACCGCTGGTGAGCCACAACGACTATCGCAGGGAAGTGACAGA AGACCTGTTTCATGCCTGTCTGAACGCGAGGCTCTCGAAGACGGCGATGC GAGATCGCCCTCCCTTCTTAACGGCGTCCTCCAGGCAAGTCAAGTCGAGT CGAGTTAATTCGTTTTCAAGAAACGCTACATCCCCAAACACAGACGGACA GACAGACAGACAGGCAGACAAAACAAGACAAGGCGAGTATTGTTTCAAAA CGCCGCTCGAGTGAGGATTCACGACTTTTTTTTTTCTTTTTTCTTTTTTT TTCCGTATCATTCACGACCACCTGGCTAGGCTATCGCTATGTCTATGCAC ATCATGGGTACACGCGAATGATCATTTTTTTGTACTCCCGAGGCATATAC TGTTTATCGGATATCCCGGTTCCTGTTCCAGTCGGTGCTACGCCTAGAAC CCCTGTGTCTAGTCGTGTGGAAGGGGGATGGGTTGCACCTGGTATGAAGG CTACATCATGACACCGCTGTACTGTACTGTACTGTACTGTAGAAAGAGAG AGATTGGCCATCGGAAATAGCTCTGATTAGAAGCGAAGTTCCGTCCTCTC GAGGACGCGTGGTTGATGGTCTACCTATGGCCTAATTATGGCATACAAGA CATAACTATACCCCCCCCCCCCGTCCTCGTCCCCGAGCTACCTTGGCAAA AATCGGAAGGAGGGACTGGCCATTATCCATTGGCGATCGCTCGTATAGAA ACCATAGTGCATCCTGTCGAGGACGTTTGGTCAATGGTCTAGCAGTTGAG GCGTGCAAAACTTCAGCCCCCGGCCTGACACCCTATGCTACGTTCAATTG TTGCTATGCTACTCTCAGCACGCCGGCTACATTGGCGTCGTTGTCCACGG TGCAGCTCGTCGTGACATCATTGGATGGCGGCTTGCCAAGAGCGATGAAA GCGGTTCTGACGGAGGTTAGACCATGCTTTGGTGTTTTTTTACTCACCAC GTTGGGAGGGGGAGGGGGAGGGGGGGGGGTTGGGCAACAAATAATCTTCA TTTCACTAACCAAAATTCTCACGAGTAAATATAATCTTGCCACAGTCAGT TGAAGTAAAAGTATCGTCAAATCAAAACGTCACCGTACCCATGTTGAGGT TATAGCGATGACTTTGATCTACCGTTATGTAATGACATTTTATCAATAAG GGGGCACTAGATACACCAGCCCTAAGACCAGTGACATGTTTGCACTTCTT CTTGGTCAAGGACGGTTCTCTCCTTCTTCTTTTTTTTTTTTTTTTTTTTT TTGAAGTGTTCAGATATGTGTACACAGGTGAGATTTCATGTGGATTGCAT GATCTCGACAGGGTGCAATGAGGCCGTTGTACTATTTTTATTGAGTTACT TATTCTGGCAAGTGGATTATAACTTGTGGATTATAACTTGTGGGAGCTTT TTCGTTTCTATCAGGTGTTCACTTGCAGGTCATGTCCTGCCATCTACGCA CAGTACACACGCGAGAGATACGGTGATACTCCGTTGTGAGGGTATTAGTC GTCCATGTAGTTAGTGCCTGCTCGAAGGGGTGCGAGAAGTCGTGGTACTC GGTCATGGTATGGCGAAGGACACATCACATGTTGTGTGATCGGTGTCCTA TCGAGCTACTCGAAACAGCGTACCAAACCTGGTGTATCCAAATTCAATTT ACTTGGTGGGCATGCGTAGCTTCTTATGGGTAGGCTGTAGCAGTCGTGAT AGGGGAATACGCACGTGTTCATGCATAGCTCTCTCAGCATAGCGTACCGC AAGCTCTCACAGTGGGGTTAGCTAGGCCCTACGCTTAAGCTAGCACCCGA GAAGCCCCCCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCTGC CGAGTAACAGCCTCATTTTGGACATTGCTCGTCTTCAATATTGCTGTCGA GCGCACCTATTTCCGACGAAAATGGGGAAGAAACGCCCACGTGTAAAACG AACCTAACCCTTCATCCTGCGTCGATGCTTGATCGGCTCTTGGCATTTCA TCCTAGTGACATCCATTTTGACGTTCAGCGATTTAGGTCAACGAACAGTT CTCTTTCGTTCGAATGCGTATGACTCTGTAGACCACACCATTCATTCTGT GGGAAGTGCTGACACGCTTTGGCGTACCATGCGAGCTAGTGTCGATTATC CACCTCGATTGGTTCCACGATCGCATTAGAGTCTTCGTGCGTCTGGACGA CGGCGAGTCTTCGGATTGGTTCTCCATCGATCAAGGCCTCCGTCACGGGG GCGCGCTGGCCCCGCTTGTGTTCTCGTCTACTTCGCGGCGGTGATGTCGG TTGTCTACAAGCGACTCAACGCCGACGATGTGGTTGGCGGTAACCTCGTG CGCATCAGATGGGGGGCATCCTACGCGCCATTTTCTTTGCTGGCGACACA GGAGTTGTCTCGCTCTTCCCGCAAAATTCAGCCAAAACGATGGCCGTCAT CGTGGTGACGTGTGCGGCGTTTGGCCTCACCGTAGCGGAATCGAAGACGG GTGCTGTGTACCTGCGTGAGCCGAAAGGCACAGCAGAATTCCCAACCATC GATGGCTTGGTTGTTGGCTGCGTGCCGAAGTTTGATATCTGACATAACTA AAAAAACAAATCTCAGACGGCGAAAATTGAAAAAAAAAAAAAGGAAAAAA AGCGTCGGACAGATAAAAATTTTATAGCTTCGAGTTTTGTCGCGCTTTGC ACACATTGCACCAAGCATCTCCTTGTCGCAGAAAAACTCCGTGGCGAACA CAATACAGTATTTCTGGTAGACCAAACAGAGCAGCCAGAAAGCTTCCTAG TGCCGAATATATCGACACAGCAGCACGGACTGTTTTAGATTGTTCTGTCC TGTCCTGTCCTGTCCTGTCCTGTCCTGTCCTGTCCTGTCCTGTCCTGTTT TGTCGGGTGTGTGATTCTATTGGCTGTAGGTTTCGCGACGATGCGTATAG CTGTGTATGGAAAGAAAGGTTCGCCCCCCTAACAAATTTACGACACGAAA AGTAAAGAGATATCTGCCTGGAGCTTGGTTCAGCACGAGCATGCACTTTT ATTCTGTACCGTGTGCGCCCCGGTGGATCATGTACAAATACAACTGCTCC GAATAAATTCGGATGCCATAGGCCGAATAAAATAAATAGGGGCGAACACT TGATTATACTCCGGAGACGTATGTGCTCACACACACACACACATTCTGAA ACTCTTGGGATAACTAAATGCTTTTGAATTTTTTGAATTTTCGCTGCAAA AGATACACGGGATTCGTCGATTTTTGTGCTTCCGGCAAAAATACGTTTTT TGATGGTTGTTTTCTTTTACGAACTTTGGTCGACGTTGAGAGTATACAGT ACTACTCGACATGCTTCTTTTTTTTGCGGCACGTTGTGGTGTGGGTCAGA TTTTTGCGATAAGACGTAATTAGCTAACGACGCGCTACGGTTTTATAGGC CTTTCGTGGCAAAATAACGTTCACTTGAAAAAAAAAAAAAAATGCTGTTG CGTCTTGTTTGCTGAACTGGTTCATTTAATTTGAACAGGTGCACCGGGTA AAGGTCCACGGCTTCAGCGACAGAGAGGTGGGTTCAGCGGCACAACAGTG GCATAAAGCATAAAGAGCTGGTTGCCATTATTTGCGGCGTTGTTGTTGTT GTTGCCGTCATTATCGTTGTTGCTGTTGTTGAATTACCCTAGAATATCCA GGAAACCCCCCCCCCCCCGCGCCATGTTGCTATTTATGTATCCCTAAATA AAAAAAACAAGTATTGCGCGCAGTCTAACTTACCTATATTTTGCTCCTTT TTGTTGTCACGTGTATCTTCCTTTTCTTCGATTGTTCGATCGGTTGGTCG GTTGGTCGGTTTTTCACTCCACTCACCCCTACCCACCCGAAAAAAAAGAT GTCCATGGCCAAACGCAACCATCTGGCTGAGGTAAGAGGAGAATGGGTCG CCCGAGATCAGACAGACTCAAACACCCTGTGCGGGGAGTATCTGGAGCAC TTCCTTCGTCAAAACCCCGTGCCAGGTATCGAGTGGGAGGCTGGAGTCCT GGGTCCCTTGCTGGAGACCGTAGTCACCGAGGACGTCAACCGTGTGGCTG AAAGGTAGATGGCGTTTGTTTCATTTTTCATGGGATTTCAGTTTTGAAAC AGCGCTTTTTTAGCGCTAATGGCTGTGTTTTTTTCTTTCGGAACCGAAAA CGGGTTTGTCACGCCAATTATGGAGAGAGCGGAACGCTGCCGTCTGTGTG GGCAGAGCCGTTCCAGTTCATATGTCTGTTCTGTATTTGTACCGTAACAC CCTTTGATTTGGCACCCTGCCTGATACTGTTTCGCCGAAGCCGATTTCCT CGAGAAGCAAGAGCTTATATGTAATGACACTACCGACACAGCAGGTCAAT CGAAAGATTTTTTCAACGAGATCTTTCCAATGATGCTGCTATCGGCGTCA TGAGCATAGTCGTTGTCGAGAGAATCCAGTTTGAAAAGTAGTACCAGGGG TTGCGATATCAAAAGGTGTTTGGTATTAATATCTGCTATATGACTTCACG TCCTCGTTCACAGACCCCCTTTTTTGGCTCGTCCCACCACACTGCTGAAT AGTCAGCTGATCTAAGCTGCCGCTCATGGTCCGAACGAGGCCATGGATGG AGTTGTGCCCTAAATCGGCGCCCTCGAACTCCTGTACTGGATTGTCGGTC TGTGTTCGACTGTCTGTTTGTATTGGGTTGTCTGTCTGTATTGGACTGTC GGTCTGTATTGGACTGTCGGTCTGTGTTGGACTGTCTATCTGTGTTGGAC TGTCTGTTTGTATTGGATTGTCTATCTGTATTGGACTGTCGGTCTGTATT GGACTGTCGGTCTGTGTTGGACTGTCTATCTGTGTTGGACTGTCGGTCTG TGTTGGACTGTCTATCTGTGTTGGATTGTCTATCTGTCTCTTTGTCAGTA CGAAGATTTTCCGAAAAAGGATCCTGTGTTGAGATAAGACAAGGCAGCTT CTCAAACCATTTCGAACCGATTGTTGTTGTTGTTGTTGTTGTTTTTTTCG GAGATATTCATATCCAATCTCAGGGTGCTGGCTTTTAAACTCTTATGTTT GGTATTCGATTAATCTCAAATTTGCGAAAAATATTCCGGCGACGCCATAA CAAACAATCCAGACTTTATGAGACAGAATAATGTTGTTGAAAAGATAATA TATGACCCTTTTTCGGCCGAGTCCTTTTCAATTTTATTTTTATTTTTTTA TTTTTTTTATAGCATTTGTTTTGGCCTTAAGAGTTAAATTGGTTGAGTGT CAATTTTTTTGGGGGTTAAACCCCCCAAAACATACGGTAAGGTTCTACTG ACCAAAATAAAAAATTGCGATCGGAGATTATCAAGTACCTCTACTGTGCA ACACCTCAGATTGTTGTGTTGTAGAGAGTTTTTGTTTGCATCCAATGCGT TGCGTAGTACACATGTGGTGACACAATATTCACACAGGCAAAGAGAAAAA AAAAAAAAAAAAGCGGTTCCGATATTAGGTTCCGCAACGTAGTTTTTGTT TGTTGTTTCGTTGTGTGTATTTTTAGTTTGCACGTTGTGACTGTTGGTAC TCAGAAGCCATCGAAGCTCATAAACGATTGGTGTATGTGCTATAGAGCAC CGGTAAGTGGCGACAGAGGTTGGCGTAGGCTCCATGAGGCAGCCAAACGC AGGGACAGCTGGGAAGCTGGGATGCAGTGTGCACCATTTGAGATCGAAGA GATATTGAACTACTGCATGCATTTTATCATTTAGGACTTGAACAAAGAAG GAAGACCACTTCCAACAGTTTCTACTGCTGTGATGCCTGCAGCAATACCG TTCTACTGAGCACTGTCTAGATAGGTTGGTAAACTCCTATCGCTTAACAT CAAGTGTTGGCACTGCACTTGACGCTACAACGCTTACGCACTGCTGTCGT GGACTCTGGCTACGAAGCCATGCTTTAACAGTGACGATATGCTTATTCCC TGTATACACATGTTGCCGTCCCTAACCGTCCCCCCAAGACGCCTGGTCAA GAGCCCGACACGTCACGTAAGGCATGCAAAACAAGAGTACCCAGCCTTAT TGATCTAATTTGTTGACGAGTATACACAAGCCCCCCACTTCCCCCATAGG ACATGGTATGAGCGATTAGTCATCGGAAATTTCTCTATAGGAACAGAGCT TTTCCCCCTCGAGGACACGCAGTCAATAGTCTCGTAACTTTGGATAAATT TGTTGACAGGTGTACACAACTGAACCCTTCCCCCCCCCCCCTCCCGTTTC CCCCCCTTTACCCTCTCCCCAGGTATGCATGGGGTAAGAACACCGTCGTA TTTGCCACCTGCCCAGCCCCCAGGAAGCTGACACGCCTCCAGGGGTGGCT TGTGGAAACCTTTCCTTCTGCAATAACGTGGCCATTTGGCGGCGGCGGTG GTGGCGGTGGTGGCGGTGGTACTTCCAAGACGCGGAGAAGACCGATCGGA ACAGGAGCGAGCCCGGTTCCGGCGAGTGGAATCGGAGTCGTGGAGGGTGT GCCAACACAGGATGATCTCCTGGATATCGTGGGGAGGTTCGAGGAGAGGT GGGGTGGAGTGGGGTAGAATGGAGGTGATGAGAAATAGAAGAGAAGGTGT TTGGATTGCGCCTGTTGTCCTGTTGTCGACCCAGTGAAGGATAGGATTGA GCGATCAAAGAATTGTGGCTGTTGGTGTTGTTGGGTTTGTTACCGTAGTA GTTTTTTACAGGATATAACACCGTGCCGGAGTATAGTGATCTCCTGAATG AAAACTACAGTACCTCATCCTTCACTTGTTGCTTCATACACGATGGAATT TTTCGCGGTGAAAATGATGAAATATAATTCAGGGGAAACGACACGGGAGG GCTCGAGGACGGCGGAGGGGGATCAGGAGGGAGGGACGTGACGGGTCGTT GGCGCCTGGGAAGCTGGGAAAGGGTCCGAGAGTGGTCGCACGACCGTTGG GGAGAGACGTTGGAGGTGGAGGATTTGCTTCCGGATTACCTGCTGACAGG TGGGAGTTGCGACGAGAAAGCTCGGGATGTCGGTATATTCAGCAGTAGCG ATGACTACGGCGGGGGATTAATTTTTTATTATTCTATTTTGAGAGTACGT TTCTGAAAATCTTGGGATTCTTGAAGCCGGTTTTCTACACAACATTCGGA GGCGTTTCCGCCCATTTTCGGATCAGCTCTTTTGCTGGCTCGACCCGTGA GGTTCAATCCTATCTAGGAAAGGTCTCTCACGATATATCAAAACGGTGTG TGCTCCACACTACATCCCTGAACCTAGACCGAAATGAGAGCAGAGCAGCG GGCCTATGGAAGCCAGTCCACCCTGAGAGTGTTGTTTTCATTGGAAACGC CGGCTTTTGACTCGGGACGGTGTGTGATCTCAAACGGGTCATATTTTTTA CTTCCACACAGAAGACAGACTGTCGGTCAAGAGGGATAAAGTATTTTTAC AAGGAGGAAGGGCTCCACAGAGGCGGTATTAACAGCCAGATCTATCTGGC CTTCACACCGTAGATGGAAGATTGACGCAGACGAGCGTCAAGGAGGGACA CAGCACGCTCGCGGTACTCATTCGGAGCCGGCACTTTGCCACTGCTGCTA CTGACAGCACCAACCAGCACCGCCAACATCACAACTGACCTTAGCGTGAC GTTCTTCTTCTTCTTCTTCTTCTTATTATTAATTTCCCTTACTATTTCCC AATTTGCGACATATTTTGTCGCCATTTGGCAAGTAATTGCATGCGTTAGC GCATATGTTGTGGCGCTTTTTTGCTACGTACCATATGCGAGACAAACTAC GCGCAAATAGGTTTAATTCTTGCAAAATCCTGCAGCGGCCGTATTCTATA TTAACCAAGTTCATGTTGCGGCGTTTTTGCCTCTTTTTTATTATATACTT CCTCTGTGCTATAATTCAAATCGATTGTGTTTTGTTTTTTTTTTAACCCC CGGAAGGCTGTACCGATGCTTCCATACTTAGTATTTTACCAAAGTATGTC TACTCAAGTCGGTTGTGTTCGGTAGATTATATCTCAAAATCTATGACTGT TGAAGGCCTGCCGTTGGAATCGTTGGAAAGCTGAAATCTGATGGACTCAT ATGCACTATTCCGAAGTTCATTTCGATTTCCTTATCAGGATTACTGGCCG CTCAAGGTTAGCCTAATTTCGACCATTTTGGAAAAATATGTGAAGGACCA AAATACAACCTTTTTTCGGCCGACTTTTTTTTGCGCCGCCCGCGCTCCCG GTGGATTTCGCCAATTTACGTGAAATTTCGGCGATCAATCCCCAAAACCT TCAAGATTATGACTAAAAAAAAATGAGATGGTTAAGTGCCTCTATGAAAT CAAGCGACTTATGGCACAGAGGAAGTATATATATATGTACTGGTAATAGT GGAGGGTGATCGCGGCTACGCTAACTCGTGTATTTGGCATGCGGGGAACA AACAGGCCAACTATTTAGTAGTCTGATCGTCGTCCTTGCGATGGCGTCGC GTAGGTCCGGCAGCAGCGGCAGCAGGGGTGTGTGTCGCAGCGGGGACAGT TGGCCAATCGTCCACGGGTGTTGCTGCTCCTCCAAACGCTCCCTCTGCGG GGGCTGTAGTGGGTGCAGCAGTTGCAGCACAGGAGGAGGAGGAGAACGAT GGAGGCGATATTGATGTGCACGAAATGAAGCTGGCTAACGGACTTCAGGT GTGTGCATAGATTTAGATTTCACGCTTCTTAATGGCGAAAACATGGGGTG TTTTGTGTTTTTGTATGTACGTTTGGCTGCGAGCGAGCGAGCGAGCGAGC GGGCCAGCTACTGTCGTACTTCAGTGTATTCCCCCAAGTTTTGTGGCGGC TATGCAATCTATCAATGGCGTGAGCGCCACAAGCATTCATGTGCTATATG TGCTTGTGTTGAGGGTATCGCGGGAAAGTTTGATGTTTGTGTGTTTGCAA TTGTGATTCGGTGGGTTACATGGAAGATATTATTTATTTTTTATTTTTTC GCTGTTGTTGCCGTTAGGATGGAAGTAAGACTCCCCAAATACCATCACCT CGAGATTTTAAAAATTCCATTTCATGGACGCCAGGGGCCACGCATTCTTG GTGCCACATCCATGGACGCACAACATATTTAACTCATCAACACACATTTG TTTTTGCTGAACGATGCATGGCCAATGTTCGGGTGCAATATATTTTGAGA TGTACGTATATATTGGGCATACTACGCCGTCACTGATAACATGAATGCCA TACATGCTGACCCTCGCAATATGTCACGAGGAAGTGCGAGCAATATACGC TGCAGGAATTTCCTTCCCGCATGTTCCGTCACCCGATAGCTTCGCCACGG CGCGTGATCAACACATACAGCCCACTATAATACTGAGGAGTAGAGGACGT GCAGCACGTATTACGTCTTGAGTAGAGGGGCGTAGATCAAGAGGAACATA TCGATATAGAAATTTAGGAACATTGGAAAACACTCTAAAATGTTTGGAGT GTAACATGATTTGATCAAACGCGCGCAATTGTTCCAACATTTCACAAATA TATAGAATTTAGAGAATAAACACTGTTTTTGCTCACAACTTTGACGAGTT GTTCAACGTCATCAGTGTTACTTACGACCGTGGCCCAAAGTGGTGCATTC ACGAAAATGTGCGATAACTAGGACGTACGTGAGTTTGTTGGAAATCGTTC CCTATTTTCTGTATGTTTGTATGCGTTCGGTTTGGCTGTCACTTGCAGCC AGCCCACCATGGGTCGGCACTGTCAAGAGGGTCACGCCTTCTTGGTGCGT ATCTTGTTAGACTAAAGTGGTGCAGCCACGGAGAGAAAATATTGGAAGAA AAGCTTCTGACTTGAATCAGCTTGTATAACGTATTTGTTCTAGAGAGAAA GGTGTAGGTTTGACCTGGGCCGCCGGTCACACCGTGGTGCTTACTTCCCT ATGCATGTCAAGGTACTGTGAGACGTCAAGCAACCGTAGCGATTCTTTAC TGTGTTGTCCTGCAGGTTTTGTAGCTTGTCGTGCCCCTCCCGCAGTGCCT TGATGCGTAAACATTCCTTGAGTATATTCGTGTGTACTAATTTGTTTTCC GCGGGGATTAGGTCGATAACGTGCTCGCTCACTCGAAGCGCCACTGCTCC GCACATAATTAAACACGATTTCATACCTCCGAAAAACAAGTACTACTGTC TGTGGGCCTGTTAAATCGGGGGTGATGCTCCCTCGTTTAATATCAACGCC CAGACAGCAAACAAAAAGTGAAACAAAATGCGCTCAAAACGAAGGTACTT ATGTTGATATTTTTGCTGTTTGTACGGGCCAGCCTGCAAGAAGAAAGATT TGATGTGAGTTTTCCAAGTTTTTAGGTTTCAGGGGCACTATCATACCGGG GAAAAAAAAAAAAAAATCCGTTAAGTTTGTCGTATTATCTTTGAGATTTT CAACAAGCGATGGCGAAAATGAATCGGGCAAGCGACGGCGTTACAAAAAA ACGAACAAACTATTCCAAAAGCGTGAACATTGGTCCTCGAGTTATGCTCA ATTACCCGATCTTTCGGCATGCAGACGCAGCGCTCAAAACCCCCGCACAA TTTGAAGTGCGCTCGCGTAAAGAGCGGAATTTTCCGACAAACAGCACCAC AATTGAGCTCGTTTTTTCCCCGCTCAAATTCCGGAATATTTTAACCTTCT CGGTAAGCATGTCAACTTAGTACGGTAGGTTTGTTAGATTGGTCATGATC AATTTTGTTTTATATTAATACTCGGATATCAATCCGCGTGAGGAGCGGTA AAGATTTTTCCCGACACAACGCATCAGGTCTCTCAGCACCGAACCTTTTT TGGCAAATTCCGACAAAATTTCGACCTAAGCTAGCCAGGGGAAATGTTTT TCCAAATCGCCGTTTAAACTAGTATGTGTGACGTAGTCATATAGTGCATT TTTGGTTTGTTTATATTGTGCGCCGTTTGAGTTCACTCGCGTAAGAAACG GACAACATTAGCCCGAGAAAGCGCTCCATTAAATAGCGTCAACCTTTTTT TCGTAAGTTCCGATACAAGTTCTACCTGCTTGCCAAGGTTGGCAACGACT GTAACTTCGTTTACAGTGGTCATATATATATTTTTTTTAATTTGAACTTT TGATCACAACCGTGGGCGTGAGGGATGGAAAACATGGGCGATTCTACAAG GCCATGGGTGAGCTCCAAATTTGTTGGATAGATTTCGACTTGCTTGGCGT AAGGGTGCTTCAAAAACTTTCAAGCTACCGTGACTTCTGAGAGCAAAATT TAAACGCGTTAATACTGTGCTTTTATCAAATTCGATTCCAGTGACAAAGT TGTAGCAAGTTCATTATCTATACATTATGCTGGAAGTTATGGATTTTTTG GGGGGGGAAAAAACAAAACAAAAAAAACTAAGAACAAAAAAAGGTTGATA AGGCGATTGCGTTCTCCAATAATGTTTTATTTTTTTTACTTTCAAATTTT TATTGGAGGAATAGAAGTCTTTCCGTCGATATGTGTGCCTAAGGAGCAAT CGTATGTTCAGTCAAATGTTACTGAATAGGGGTATCCTATTTTTGGCCCT CTCTCCGGTGTCACGTGTATGCATGCGCCTTATTTCAGTGCTGTAACTTC CATTTATTTGTTCCATATCTTATGTTCGGACACTTGAGGTGCTGCGTTTT GATGTTATCTGTCTTGAGATATTTTTAGGGCCCTCGATCTTTTGGAAGTA TAATACGCGAGGTTCCTCGAGCATTCGTTCACAGTAGGGGCGTTTACGTC GAGTGAACCAAGGATACAGTACTGTGGCACGTTAGAGCTCTAGCTGGTGA ATCCGTCAATCTCATTTTGAATCGTCAACATTATCATCCCCATGGGCGTC AGTAAAAGTAGAAAATGATGACCAAAACTAGAGTAATCATACCTTGGTGT CCTCCTCGGTAACGGTGTTCACCATCCCATCCTTCGTCGTCATCGTCATC ATCACGCGTACGACACCTCTACCACAGTATCATAGCCATACATTACAGTA CACAGTGCCTCCCTTTATCTCACGTCTTTGTTCTCGGCGATTGGTCTTTA CGATGATTAATCATCGCACGTTAATGCAATTCAGGTGACATATAAGTGCA CCAACTTCTGCGACGACGAGGTGCTATTCTCGGGCCTGGCGAACGGCGGC AGAACCGAGCTGCCTCCCGACAAAGCTCCTTCCGCTCTTATGTCGGTCAC TGTGGCGGAAGAATTGGGCATTTTTGGCATAAAGCCGTCCAAGGCTATGG ACATGCTGACCGGAAAAAGGGTCAGCCTCGGACTCAGCATCGAGGCCTAC GACCGCGAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5999:517..12975+

>mRNA_H-paniculata_contig5999.13659.1 ID=mRNA_H-paniculata_contig5999.13659.1|Name=mRNA_H-paniculata_contig5999.13659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2442bp|location=Sequence derived from alignment at H-paniculata_contig5999:517..12975+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCATCTCTACCGCTGGTGAGCCACAACGACTATCGCAGGGAAGTGACAGA
AGACCTGTTTCATGCCTGTCTGAACGCGAGGCTCTCGAAGACGGCGATGC
GAGATCGCCCTCCCTTCTTAACGGCGTCCTCCAGGCAAGTCAACCATCTC
TACCGCTGGTGAGCCACAACGACTATCGCAGGGAAGTGACAGAAGACCTG
TTTCATGCCTGTCTGAACGCGAGGCTCTCGAAGACGGCGATGCGAGATCG
CCCTCCCTTCTTAACGGCGTCCTCCAGGCAAGTCAACACGCCGGCTACAT
TGGCGTCGTTGTCCACGGTGCAGCTCGTCGTGACATCATTGGATGGCGGC
TTGCCAAGAGCGATGAAAGCGGTTCTGACGGAGCACGCCGGCTACATTGG
CGTCGTTGTCCACGGTGCAGCTCGTCGTGACATCATTGGATGGCGGCTTG
CCAAGAGCGATGAAAGCGGTTCTGACGGAGGTGCACCGGGTAAAGGTCCA
CGGCTTCAGCGACAGAGAGGTGCACCGGGTAAAGGTCCACGGCTTCAGCG
ACAGAGAGATGTCCATGGCCAAACGCAACCATCTGGCTGAGGTAAGAGGA
GAATGGGTCGCCCGAGATCAGACAGACTCAAACACCCTGTGCGGGGAGTA
TCTGGAGCACTTCCTTCGTCAAAACCCCGTGCCAGGTATCGAGTGGGAGG
CTGGAGTCCTGGGTCCCTTGCTGGAGACCGTAGTCACCGAGGACGTCAAC
CGTGTGGCTGAAAGATGTCCATGGCCAAACGCAACCATCTGGCTGAGGTA
AGAGGAGAATGGGTCGCCCGAGATCAGACAGACTCAAACACCCTGTGCGG
GGAGTATCTGGAGCACTTCCTTCGTCAAAACCCCGTGCCAGGTATCGAGT
GGGAGGCTGGAGTCCTGGGTCCCTTGCTGGAGACCGTAGTCACCGAGGAC
GTCAACCGTGTGGCTGAAAGGTATGCATGGGGTAAGAACACCGTCGTATT
TGCCACCTGCCCAGCCCCCAGGAAGCTGACACGCCTCCAGGGGTGGCTTG
TGGAAACCTTTCCTTCTGCAATAACGTGGCCATTTGGCGGCGGCGGTGGT
GGCGGTGGTGGCGGTGGTACTTCCAAGACGCGGAGAAGACCGATCGGAAC
AGGAGCGAGCCCGGTTCCGGCGAGTGGAATCGGAGTCGTGGAGGGTGTGC
CAACACAGGATGATCTCCTGGATATCGTGGGGAGGTTCGAGGAGAGGTGG
GGTGGAGTGGGGTATGCATGGGGTAAGAACACCGTCGTATTTGCCACCTG
CCCAGCCCCCAGGAAGCTGACACGCCTCCAGGGGTGGCTTGTGGAAACCT
TTCCTTCTGCAATAACGTGGCCATTTGGCGGCGGCGGTGGTGGCGGTGGT
GGCGGTGGTACTTCCAAGACGCGGAGAAGACCGATCGGAACAGGAGCGAG
CCCGGTTCCGGCGAGTGGAATCGGAGTCGTGGAGGGTGTGCCAACACAGG
ATGATCTCCTGGATATCGTGGGGAGGTTCGAGGAGAGGTGGGGTGGAGTG
GGGGACGTGACGGGTCGTTGGCGCCTGGGAAGCTGGGAAAGGGTCCGAGA
GTGGTCGCACGACCGTTGGGGAGAGACGTTGGAGGTGGAGGATTTGCTTC
CGGATTACCTGCTGACAGGTGGGAGTTGCGACGAGAAAGCTCGGGATGTC
GGGACGTGACGGGTCGTTGGCGCCTGGGAAGCTGGGAAAGGGTCCGAGAG
TGGTCGCACGACCGTTGGGGAGAGACGTTGGAGGTGGAGGATTTGCTTCC
GGATTACCTGCTGACAGGTGGGAGTTGCGACGAGAAAGCTCGGGATGTCG
CACAGGAGGAGGAGGAGAACGATGGAGGCGATATTGATGTGCACGAAATG
AAGCTGGCTAACGGACTTCAGCACAGGAGGAGGAGGAGAACGATGGAGGC
GATATTGATGTGCACGAAATGAAGCTGGCTAACGGACTTCAGGTGACATA
TAAGTGCACCAACTTCTGCGACGACGAGGTGCTATTCTCGGGCCTGGCGA
ACGGCGGCAGAACCGAGCTGCCTCCCGACAAAGCTCCTTCCGCTCTTATG
TCGGTCACTGTGGCGGAAGAATTGGGCATTTTTGGCATAAAGCCGTCCAA
GGCTATGGACATGCTGACCGGAAAAAGGGTCAGCCTCGGACTCAGCATCG
AGGCCTACGACCGCGAGGTGACATATAAGTGCACCAACTTCTGCGACGAC
GAGGTGCTATTCTCGGGCCTGGCGAACGGCGGCAGAACCGAGCTGCCTCC
CGACAAAGCTCCTTCCGCTCTTATGTCGGTCACTGTGGCGGAAGAATTGG
GCATTTTTGGCATAAAGCCGTCCAAGGCTATGGACATGCTGACCGGAAAA
AGGGTCAGCCTCGGACTCAGCATCGAGGCCTACGACCGCGAG
back to top