mRNA_H-paniculata_contig5980.13634.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: A0A6H5L5S3_9PHAE (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5S3_9PHAE) HSP 1 Score: 401 bits (1030), Expect = 4.280e-119 Identity = 362/988 (36.64%), Postives = 439/988 (44.43%), Query Frame = 1
Query: 610 EAAAVEAILDELPRGRFR----PGCGNSRSVDETVGSESWTLLVEALSSRGTFYDHDVCGGGMCEARVQDGAAMEEDGAEVGGRGSREARGGVVTMVTIDPKEFPLLLSRQVHAAVVDGLAANLLHVEVQSPLVDYCEALVTRDSKTQLQALQILEPAFAAMEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEDDPKDDAEXXXXXXXXXXXXXXXXXTKPLEADSEVNAVGTITTAGATALGDGKRPRPSLEANRSDARR-----------------------------AWRCLQAARVAARLVPPLSVRALLPAAA-SLRHSGAPAARVPAGNPRSYNSGFISGSGGGGCSSVEGVKRAGTAGWPLTVATVAVRDLPANVSVTAFWFEDDADYS-----------------DDEEEIGV-GD--------EG---------------REVGEGVRAREPVLEDYIPFGGGGGVTMGDYIHDNKGSSGDGGGAPIVRSSLDCEQLLDAAEHAVGEDRFDDAFGLLQQAAALDPENGDVLYRAGVCAINQGAWSRALRLWRNGLALSPNHAQLCVEAEKYDSLAFWLE--QRPSNSDHVSKTLDICSDAGVAETSRLLCDHTPFGPPLPAQPPPQPASALASNVVCNKTLRTAEKTGSSCSSSDNLDIMFM-GRGEWVCETRRPPLSIAECAAVIAEAXXXXXXXXXXXXXTTISATGANNAAVGGWGTTRHYSVPTTDMAVRDLPQTLAWFNAAMHSRIGPLVAAAAALGDGDL-LPSRSS-----SPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTHKRTASAASEATSERAH-------DVAQFVRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRAVRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFLYEHHVEEEGAE 3300
EAAAV I + PRG P ESWTLL+EAL S+ V GG EA AA+ V IDP FPLLL R+ H +VV GLAANLL VEV+SP+V+YCEALVT+ Q QAL++LEP ME+E D P D + + +DSE G++ G A + +L AWRC++AAR A+RL+P L+ ALLPA+A L HS PAARVPAG+ RSYN G GGG V G AG AGWPL VATVA+RDL A +++ W + + +S DD + GD EG +E G R+ E L + F G G + ++ G + GGG+ V S+ E+LL A+ AV EDR ALRLW++GLALSPNH +L EAEKY +LAFWL+ + +N+D S + TA + + DNLD+ FM G GEWVC TR P +S +EC+A+I EA XXXXXXXXX + GWGT+RHY+VPTTD+AVR+LP+TLAWFN AM +RIGP VA AAALG G P R S SPP+ S + + EA R A +RRLRVHDAFVVRYD+AAQRSLPLHTDQGELSLTISLN EYEGGGTWFEGLGRAVRP EAGH+VVFPGG TVHGG+E+T GVRYILAVFLYEH EEE E
Sbjct: 143 EAAAVREITEAFPRGWIADVSPPXXXXXXXXXXXXIRESWTLLLEALESK-------VVSGGT-EAGTGAVAALXXXXXXX-----------XXXAVLIDPGSFPLLLGRRFHESVVRGLAANLLEVEVESPVVEYCEALVTQGDDVQRQALKVLEPTLNDMEDE-----------------------------------------------SDFPDSDE----------IIIVSSSSSNGVASDSEGERDGSVDINGRRAPATSRSSTENLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAWRCVEAARSASRLLPRLTAHALLPASALRLPHSCTPAARVPAGDRRSYNVG------GGGV--VSGAPTAGAAGWPLAVATVALRDLAAGEALSCSWVDPEEPFSVRMARLEEYSRVPPWASDDXXXVPTAGDCAASSCPLEGXXXXXXXXXNDCRGSKETGVSGRSGEGTLAS-LQFPRGRGCGCPKCLVESGGLA--GGGSEGVSSAGAAERLLKVAQQAVDEDR-------------------------------------ALRLWKDGLALSPNHPELKREAEKYQALAFWLDPGEGDANTDARSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDDGF------TAPAQLPAGEAFDNLDVDFMAGDGEWVCSTRLPLISASECSAIINEAEEKAXXXXXXXXXXXXXXXXXXXS---GWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALGGGIFERPGRRSGSLELSPPVAKPHAKDEDFPAHAVCSAADSDEAAAAIALIAPEDGQKGRQVESDDDQEGQS-REAEEPRGRAGAPXXXXXALMLRRLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGRAVRPEEAGHVVVFPGGRTVHGGKEVTRGVRYILAVFLYEHWEEEEEEE 996
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: D7G7N2_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N2_ECTSI) HSP 1 Score: 356 bits (913), Expect = 4.770e-107 Identity = 234/477 (49.06%), Postives = 267/477 (55.97%), Query Frame = 1
Query: 1912 DGGGAPIVRSSLDCEQLLDAAEHAVGEDRFDDAFGLLQQAAALDPENGDVLYRAGVCAINQGAWSRALRLWRNGLALSPNHAQLCVEAEKYDSLAFWLEQRPSNSDHVSKTLDICSDAGV---AETSRLLCDHTPFGPPLPAQPPPQPASALASNVVCNKTLRTAEKTGSSCSSSDNLDIMFM-GRGEWVCETRRPPLSIAECAAVIAEAXXXXXXXXXXXXXTTISATGANNAAVGGWGTTRHYSVPTTDMAVRDLPQTLAWFNAAMHSRIGPLVAAAAALGDGDL-LPSRSS-----SPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTHKRTAS-----AASEATSERAHDVAQ-------FVRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRAVRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFLYEH 3276
DG G+ + + E+LL AA+ AV EDRFDDAF L +AA P+N D+LYRAGVCAINQG WSRALRLWR+GLALSP+H +L EAEKY +LAFWL+ P D D S +G A T L E + DNLD+ FM G GEWVC TR P LS +EC+A++ EA XXXXXXXX GGWGT+RHY+VPTTD+AVR+LP+TLAWFN AM +RIGP VA AAALG G P R S SPP+ + + EA R A +RRLRVHDAFVVRYD+AAQRSLPLHTDQGELSLTISLN EYEGGGTWFEGLG AVRP EAGH+VVFPGG TVHGGRE+T GVRYILAVFLYEH
Sbjct: 91 DGDGSEGMSGAGAAERLLKAAQQAVDEDRFDDAFEALSRAARAAPDNSDILYRAGVCAINQGRWSRALRLWRDGLALSPDHPELKREAEKYQALAFWLD--PGKGD---ANPDARSSSGALVGAATXXXXXXXXXXXXXXXXXXXXXXXXXQDDGFTATALLPAGE-------AFDNLDVDFMTGHGEWVCSTRLPLLSASECSAIVNEAEEKASXXXXXXXXXXXXXX----XXXGGWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALGGGVFERPGRRSGSLKRSPPVAEPHAQDEDFPARAVCSAADSDEAAESAEALRASASVEPENGQERRQVESDDDQXXXXXEAEEPRGRPGAPTPXXPALMLRRLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGSAVRPEEAGHVVVFPGGRTVHGGREVTRGVRYILAVFLYEH 551
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: A0A7S2HJP0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJP0_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.720e-24 Identity = 87/260 (33.46%), Postives = 111/260 (42.69%), Query Frame = 1
Query: 2575 ISATGANNAAVGGWGTTRHYSVPTTDMAVRDLPQTLAWFNAAMHSRIGPLVAAAAALGDGDLLPSRSSSPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTHKRTASAASEATSERAHDVAQFVRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNSAQ---------------------EYEGGGTWFEGLGRAVRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFLYEHHVEEE 3291
+ A A + GGW T+RHYSVPTTD+ VR LP+ L WF + R+ P+ L + PP RRL V+DAF+V+Y + AQR LPLHTDQ LSLTI+LN + +EGGGT+FE +GR + P AG +V FPG + HGG+ IT GVRYI+AVFLY +EEE
Sbjct: 38 VVAANAYTQSAGGWATSRHYSVPTTDIPVRALPRVLDWFRSCCRKRLFPM------------LETLYGVPP---------------------------------------------------------------------RRLGVNDAFIVKYTAEAQRHLPLHTDQSALSLTIALNGSGGDDHHPSHEGGDADGPEDAVGSFEGGGTYFEQIGRPLCPC-AGGLVAFPG-ELSHGGQPITKGVRYIIAVFLYV--IEEE 212
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: A0A6U6BVH0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BVH0_GUITH) HSP 1 Score: 103 bits (258), Expect = 2.350e-21 Identity = 74/222 (33.33%), Postives = 97/222 (43.69%), Query Frame = 1
Query: 2608 GGWGTTRHYSVPTTDMAVRDLPQTLAWFNAAMHSRIGPLVAAAAALGDGDLLPSRSSSPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTHKRTASAASEATSERAHDVAQFVRRLRVHDAFVVRYD-SAAQRSLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRAVRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFLY 3270
GGW T+RHY+VPTTD+ V + + L WF + R+GPL+A ++ E+ V R+ DAF+V+Y S QR LP+H DQ S TI+LN+ YEGGGT+F GLG A++P E GH++ F G D +HGG IT GVRYILA F Y
Sbjct: 8 GGWTTSRHYAVPTTDLPVHEHDEILCWFRKHLACRLGPLLA---------------------------------------------------------------------LQYGADMVGEKGCFV-------RIFDAFIVKYAASGGQRHLPVHRDQSTHSFTIALNARSCYEGGGTYFCGLGTAIKP-EQGHVLSFEG-DMLHGGEPITSGVRYILAAFTY 151
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: A0A7S3S1M1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S1M1_EMIHU) HSP 1 Score: 110 bits (274), Expect = 3.510e-21 Identity = 61/93 (65.59%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 2998 RLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRA--VRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFLY 3270
RLRV DAFVVRYD+AAQRSLP H D LSLTI+LN EY+GGGT FE LG VRP E G +V FPG + HGGR +T GVRYI+AVFL+
Sbjct: 455 RLRVWDAFVVRYDAAAQRSLPTHQDDSHLSLTIALNETGEYDGGGTSFEDLGGEGFVRP-EKGCVVAFPG-ELRHGGRAVTRGVRYIIAVFLW 545
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: R1BXH6_EMIHU (Fe2OG dioxygenase domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BXH6_EMIHU) HSP 1 Score: 110 bits (274), Expect = 4.840e-21 Identity = 61/93 (65.59%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 2998 RLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRA--VRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFLY 3270
RLRV DAFVVRYD+AAQRSLP H D LSLTI+LN EY+GGGT FE LG VRP E G +V FPG + HGGR +T GVRYI+AVFL+
Sbjct: 510 RLRVWDAFVVRYDAAAQRSLPTHQDDSHLSLTIALNETGEYDGGGTSFEDLGGEGFVRP-EKGCVVAFPG-ELRHGGRAVTRGVRYIIAVFLW 600
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: R1G8J0_EMIHU (Fe2OG dioxygenase domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G8J0_EMIHU) HSP 1 Score: 111 bits (277), Expect = 6.240e-21 Identity = 56/97 (57.73%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 2977 DVAQFVRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRAVRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFL 3267
+ A LRV D F+VRYD+ Q SLP HTDQ LS TI+LN EY+GGGTWF GLGRAV AGH V+FPG HGG IT GVRYI+ +F+
Sbjct: 871 EAAPLASSLRVLDCFLVRYDATKQASLPTHTDQSLLSFTIALNDPGEYDGGGTWFRGLGRAVDAPAAGHAVLFPG-KVEHGGHPITRGVRYIIVLFM 966
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: A0A0L0FXL0_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FXL0_9EUKA) HSP 1 Score: 108 bits (271), Expect = 9.340e-21 Identity = 116/459 (25.27%), Postives = 161/459 (35.08%), Query Frame = 1
Query: 1936 RSSLDCEQLLDAAEHA------VGEDRF------DDAFGLLQQAAALDPENGDVLYRAGVCAINQGAWSRALRLWRNGLALSPNHAQLCVEAEKYDSLAFWLEQRPSNSDHVSKTLDICSDAGVAETSRLLCDHTPFGPPLPAQPPPQPASALASNVVCNKTLRTAEKTGSSCSSSDNLDIMFMGRGEWVCETRRPPLSIAECAAVIAEAXXXXXXXXXXXXXTTISATGANNAAVGGWGTTRHYSVPTTDMAVRDLPQTLAWFNAAMHSRIGPLVAAA-AALGDGDLLPSRSSSPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTHKRTASAASEATSERAHDVAQFVRRLRVHDAFVVRYDSAAQR-SLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRAVRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFLY 3270
++S+ C++L+D + A + ED D G QQ A D Y G AI+ G ++A +W +G PN +L + K + +Q + K D C++A V E D + LA N+ +T + ++F + + E R + + C A+ GGWGT RH SVPTTD+AV D+P W M + P++ A L DG L R R+R+HDAFVVRYD+A + SLP H+D LS T++L YEGGGTWF LG V AGH V F G H G I+HG R IL +F Y
Sbjct: 114 KASVLCQELVDLYKEANTPDTELTEDAAHTLASPSDPDGYRQQRAKDKQAVADAFYILGWIAIHAGDHTQAYTVWEDGYTWLPNDKRLRKQHRK----RYCWDQERVQGEADGKGQDGCANAPVDEMEAFSVDEAH-------------QAELALNLFSRRTQKNR--------------VVFRSKKPIIPEDERQ-MVLDACEQFAADNG-------------------------GGWGTVRHCSVPTTDVAVEDIPILRPWLRTLMRKCLAPMLRACFPLLADGTDLGPRGD-------------------------------------------------------------------------RVRIHDAFVVRYDAADRSVSLPTHSDTSSLSFTVALTEQSGYEGGGTWFGALGGKVVDAPAGHAVAFAG-PLRHAGHPISHGTRTILVLFCY 441
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: A0A7R9Y3V3_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y3V3_9VIRI) HSP 1 Score: 109 bits (273), Expect = 1.020e-20 Identity = 82/260 (31.54%), Postives = 104/260 (40.00%), Query Frame = 1
Query: 2485 PPLSIAECAAVIAEAXXXXXXXXXXXXXTTISATGANNAAVGGWGTTRHYSVPTTDMAVRDLPQTLAWFNAAMHSRIGPLVAAAAALGDGDLLPSRSSSPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTHKRTASAASEATSERAHDVAQFVRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRAVRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVF 3264
P LS +CAA++ SA A A GGW T+RHY VPTTD+ + ++P+ LA F A + P +AA L P P RLRVHDAFVVRYDSA +R LP H D+ ++S T++LN+ Y GGGT F LGRA+ G V+F GG H G IT G RYI+A+F
Sbjct: 568 PLLSAEQCAAIV-------------------SAAEAAAEARGGWTTSRHYGVPTTDVPLAEVPEALAVFREAWARALAPALAA--------LFPDAVEGVPAS--------------------------------------------------------------------RLRVHDAFVVRYDSAERRGLPRHRDEAQISATLALNAPPAYAGGGTHFPALGRAIDASNVGGAVLFEGGAVEHAGEVITAGTRYIVAIF 732
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Match: A0A836CK11_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK11_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.840e-20 Identity = 61/113 (53.98%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 2983 AQFVRRLR------VHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNSAQEYEGGGTWFEGLGRAVRPVEAGHIVVFPGGDTVHGGREITHGVRYILAVFLYEHHVEEEGAEN 3303
AQF R R VHDAFVVRY AAQR LPLH DQ SLT++LN A +EGGGT+F+ L A+R EAGH++ F G D +HGG IT G RYI+A FLY + G N
Sbjct: 447 AQFAPRARAAHSWHVHDAFVVRYSHAAQRHLPLHADQSTHSLTVALNGAGAFEGGGTYFQHLDSALR-TEAGHVLSFKG-DLIHGGDPITEGTRYIIAAFLYLDEQDASGCSN 557 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5980.13634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5980.13634.1 >prot_H-paniculata_contig5980.13634.1 ID=prot_H-paniculata_contig5980.13634.1|Name=mRNA_H-paniculata_contig5980.13634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1106bp KTSRNVARGDVISVERPRAAVQTSNALPWVIACPGCLRHVGTLDLQLAIAback to top mRNA from alignment at H-paniculata_contig5980:3026..10907- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5980.13634.1 ID=mRNA_H-paniculata_contig5980.13634.1|Name=mRNA_H-paniculata_contig5980.13634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7882bp|location=Sequence derived from alignment at H-paniculata_contig5980:3026..10907- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5980:3026..10907- >mRNA_H-paniculata_contig5980.13634.1 ID=mRNA_H-paniculata_contig5980.13634.1|Name=mRNA_H-paniculata_contig5980.13634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6636bp|location=Sequence derived from alignment at H-paniculata_contig5980:3026..10907- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |