mRNA_H-paniculata_contig593.13561.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Match: D7FQE8_ECTSI (Adenylate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE8_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.140e-26 Identity = 69/100 (69.00%), Postives = 78/100 (78.00%), Query Frame = 2
Query: 416 MNRVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFDLISQELESKVSSSATAAKIRGGGGLGEVT---TTPIEGMKPGTSGLRKK 706
++R+IQRADDTAEKAQVRL YH+NIAAIRECYED+TCSLDG+ KE VF I+ EL+S + A AA IRGGG G V T PIEGMKPGTSGLRKK
Sbjct: 264 VDRLIQRADDTAEKAQVRLVQYHSNIAAIRECYEDITCSLDGSVGKEEVFLGITSELDSTL---AAAAAIRGGGEGGRVVEEATEPIEGMKPGTSGLRKK 360
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Match: A0A7S2B3Q2_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B3Q2_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.910e-9 Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 2
Query: 419 NRVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFDLISQELESKVSSSATAAKIRGGGGLGEVTTTPIEGMKPGTSGLRKK 706
+R QR+DDT EK +VRLE +H N+ A+ + Y+DV +DG + V+ I L++ + + V T+PIEGMK GTSGLRKK
Sbjct: 210 DRCTQRSDDTEEKVKVRLEQFHDNVNAVVDFYKDVKTEVDGTAKPDEVYTTIKSTLDAATTKVPAVS----------VPTSPIEGMKMGTSGLRKK 295
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Match: A0A7S3Y521_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y521_HETAK) HSP 1 Score: 60.5 bits (145), Expect = 3.310e-6 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 2
Query: 422 RVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFDLISQEL 586
R++ RADDT EKA+VRL YHANI AI CY D+ +DG Q K V+ I Q L
Sbjct: 234 RLVHRADDTEEKARVRLGQYHANIDAIIGCYGDILQKIDGTQAKTDVYQAIVQAL 288
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Match: A0A388LVB8_CHABU (Adenylate kinase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LVB8_CHABU) HSP 1 Score: 61.6 bits (148), Expect = 4.010e-6 Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 2
Query: 422 RVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFDLISQELES 592
R+ QR DDT EK + RL++++AN+AA+ Y DV ++G QPKE VFD ISQ L S
Sbjct: 441 RLTQRTDDTEEKVKARLQTHYANVAAVLSTYTDVIKRINGDQPKEVVFDEISQLLSS 497
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Match: A0A6V1U1G9_HETAK (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U1G9_HETAK) HSP 1 Score: 61.6 bits (148), Expect = 5.150e-6 Identity = 44/129 (34.11%), Postives = 58/129 (44.96%), Query Frame = 2
Query: 422 RVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFDLISQELESKVSSSATAA--------------KIRGG--------------------GGLGEVTTTPIEGMKPGTSGLRKK 706
RV QRADD A+K RL +YH ++ + Y+D+ +DG Q KE +F +I ++ SS A ++ GG G V T PI GMKPGTSGLRKK
Sbjct: 297 RVEQRADDEADKVINRLATYHEHVDNVIFNYKDILTKVDGTQSKEAIFSIIESVVDDNKSSGTKEAIEEVKEFAKEEPQEEVAGGRPDFEPAPAEVEMASSEVLPDGAMIVETAPIGGMKPGTSGLRKK 425
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Match: A0A7S0CMU4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CMU4_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 4.590e-5 Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 2
Query: 422 RVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFDLI 574
R+ QR+DDT EK +VRLE +HANIAA++ CY D+ +DG V +I
Sbjct: 148 RLEQRSDDTEEKVKVRLEQFHANIAAVKGCYTDIAVEVDGTGKPSDVASVI 198
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Match: A0A7S2K3T5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3T5_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.920e-5 Identity = 24/59 (40.68%), Postives = 40/59 (67.80%), Query Frame = 2
Query: 422 RVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFDLISQELESKV 598
R++QR+DDT +K +VRLE +HAN+AA++ Y DV +DGA+ + + I E+ ++
Sbjct: 207 RLVQRSDDTEKKVKVRLEQFHANLAAVKGSYADVCVEVDGARSPDVIAKEIDVEIRKRI 265
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Match: A0A7S2P2P8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2P8_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 8.870e-5 Identity = 24/60 (40.00%), Postives = 42/60 (70.00%), Query Frame = 2
Query: 416 MNRVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFDLISQELESK 595
+NR++QR+DDT EKA+VRL +H+NIA+++ Y+ V +DG + ++ + + I EL +
Sbjct: 234 INRLVQRSDDTEEKARVRLRQFHSNIASVKSRYKKVMVKVDGTKSRDHISNQIKIELSKR 293 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig593.13561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig593.13561.1 >prot_H-paniculata_contig593.13561.1 ID=prot_H-paniculata_contig593.13561.1|Name=mRNA_H-paniculata_contig593.13561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp MNRVIQRADDTAEKAQVRLESYHANIAAIRECYEDVTCSLDGAQPKETVFback to top mRNA from alignment at H-paniculata_contig593:26154..30840- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig593.13561.1 ID=mRNA_H-paniculata_contig593.13561.1|Name=mRNA_H-paniculata_contig593.13561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4687bp|location=Sequence derived from alignment at H-paniculata_contig593:26154..30840- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig593:26154..30840- >mRNA_H-paniculata_contig593.13561.1 ID=mRNA_H-paniculata_contig593.13561.1|Name=mRNA_H-paniculata_contig593.13561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig593:26154..30840- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |