prot_H-paniculata_contig5908.13534.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5908.13534.1
Unique Nameprot_H-paniculata_contig5908.13534.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length65
Homology
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: D8LQC0_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC0_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 7.300e-34
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            GTSQTTARRLADFLGAEMVKDKGLNCRMI+SNRPHGAPVT+RA+PT IFSAEPAVKKHYLRKWLK
Sbjct:  998 GTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTDRAVPTAIFSAEPAVKKHYLRKWLK 1062          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: A0A6H5J9K7_9PHAE (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 7.310e-34
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            GTSQTTARRLADFLGAEMVKDKGLNCRMI+SNRPHGAPVT+RA+PT IFSAEPAVKKHYLRKWLK
Sbjct:  129 GTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTDRAVPTAIFSAEPAVKKHYLRKWLK 193          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: B8BW81_THAPS (DNA polymerase epsilon catalytic subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW81_THAPS)

HSP 1 Score: 112 bits (281), Expect = 1.630e-27
Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            GTSQTTARRL +FLGAE++KDKGLNC+ IIS  PHGAPVT+RA+PT I+ AEPAV KHYLRKWLK
Sbjct:  950 GTSQTTARRLGEFLGAEIIKDKGLNCKFIISQLPHGAPVTDRAVPTAIWKAEPAVMKHYLRKWLK 1014          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: W7TVX1_9STRA (DNA-directed DNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVX1_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.230e-27
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            G S TTA RLADFLG +MVKDKGLNCR++I+NRPHGAPVTERAIPT IFS  P V+KH+LRKWLK
Sbjct: 1054 GASLTTASRLADFLGPDMVKDKGLNCRLVIANRPHGAPVTERAIPTAIFSTAPGVRKHFLRKWLK 1118          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: A0A7S2UKD9_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKD9_9STRA)

HSP 1 Score: 110 bits (276), Expect = 7.710e-27
Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            GTSQTTARRL +FLGAE++KDKGLNC+ II+ RP GAPVTERAIPT I+ AEPAV KH+LRKWLK
Sbjct:  243 GTSQTTARRLGEFLGAEVIKDKGLNCKFIIAERPFGAPVTERAIPTAIWKAEPAVMKHFLRKWLK 307          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: A0A7S1YW09_9STRA (DNA polymerase epsilon catalytic subunit n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YW09_9STRA)

HSP 1 Score: 110 bits (276), Expect = 7.710e-27
Identity = 50/65 (76.92%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            GTSQTTARRL +FLGAE++KDKGLNC+ II+  P+GAPVTERAIPT I+ AEPAV KHYLRKW+K
Sbjct:  271 GTSQTTARRLGEFLGAEIIKDKGLNCKFIIAEHPYGAPVTERAIPTAIWKAEPAVMKHYLRKWMK 335          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: A0A7S2PF68_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PF68_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.250e-26
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            GTSQTTARRL++FLGA++VKDKGLNC+ IIS  P+GA VTERAIPT I+ AE  V+KHYLRKWLK
Sbjct:  100 GTSQTTARRLSEFLGADIVKDKGLNCQFIISELPYGAAVTERAIPTAIWKAEAPVRKHYLRKWLK 164          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: A0A1E7F5I3_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5I3_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.680e-26
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            GTSQTTARRL +FLGAE++KDKGLNC+ II+ +P+GAPVTERAIPT I+ AEPAV +H+LRKWLK
Sbjct:  973 GTSQTTARRLGEFLGAEIIKDKGLNCKFIIAEQPYGAPVTERAIPTAIWKAEPAVMRHFLRKWLK 1037          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: A0A448YYZ1_9STRA (DNA polymerase epsilon catalytic subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYZ1_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.680e-26
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = 0
Query:    1 GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            GTSQTTARRL +FLGAE++KDKGLNC+ II+ +P+GAPVTERAIPT I+ AEPAV +H+LRKWLK
Sbjct: 1096 GTSQTTARRLGEFLGAEIIKDKGLNCKFIIAEQPYGAPVTERAIPTAIWKAEPAVMRHFLRKWLK 1160          
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Match: A0A1Y2FYA9_9BASI (DNA polymerase epsilon catalytic subunit n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2FYA9_9BASI)

HSP 1 Score: 108 bits (269), Expect = 6.820e-26
Identity = 49/64 (76.56%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    2 TSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFSAEPAVKKHYLRKWLK 65
            TS +TARRLA+FLG +MV+DKGL+CR IIS +PHGAPVTERA+P  IFSAEP+VKKH+LRKWLK
Sbjct: 1086 TSISTARRLAEFLGEQMVRDKGLSCRFIISTKPHGAPVTERAVPVAIFSAEPSVKKHFLRKWLK 1149          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5908.13534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQC0_ECTSI7.300e-3493.85DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A6H5J9K7_9PHAE7.310e-3493.85DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
B8BW81_THAPS1.630e-2778.46DNA polymerase epsilon catalytic subunit n=1 Tax=T... [more]
W7TVX1_9STRA2.230e-2778.46DNA-directed DNA polymerase n=2 Tax=Monodopsidacea... [more]
A0A7S2UKD9_9STRA7.710e-2778.46DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A7S1YW09_9STRA7.710e-2776.92DNA polymerase epsilon catalytic subunit n=1 Tax=D... [more]
A0A7S2PF68_9STRA1.250e-2675.38DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A1E7F5I3_9STRA2.680e-2675.38DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A448YYZ1_9STRA2.680e-2675.38DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]
A0A1Y2FYA9_9BASI6.820e-2676.56DNA polymerase epsilon catalytic subunit n=1 Tax=L... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..65
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5908contigH-paniculata_contig5908:10972..11166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5908.13534.1mRNA_H-paniculata_contig5908.13534.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5908 10972..11166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5908.13534.1 ID=prot_H-paniculata_contig5908.13534.1|Name=mRNA_H-paniculata_contig5908.13534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
GTSQTTARRLADFLGAEMVKDKGLNCRMIISNRPHGAPVTERAIPTVIFS
AEPAVKKHYLRKWLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029703POL2