prot_H-paniculata_contig588.13498.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig588.13498.1
Unique Nameprot_H-paniculata_contig588.13498.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length204
Homology
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 151 bits (382), Expect = 7.070e-41
Identity = 81/192 (42.19%), Postives = 120/192 (62.50%), Query Frame = 0
Query:    5 TRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGL 196
            T  R ++ Y+ +L +R ME+P  +     KRI RY+      GI +  +  G  L GFVD+++A DV+D+KST+GYVF L GGA+S  S+KQ +VT S+TEAE++AA     + ++L  +LG IG+     TTLF D  S I LSK    H  S++I VR++ +R+ V E ++ LK+  T DQL+DI+ K +
Sbjct:  167 TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRY-KQGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAV 357          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI000901F676 (uncharacterized protein LOC109128812 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000901F676)

HSP 1 Score: 149 bits (377), Expect = 1.220e-40
Identity = 82/199 (41.21%), Postives = 120/199 (60.30%), Query Frame = 0
Query:    5 TRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITF--GGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 201
            T  R ++ Y+ +L +R ME P  +  +T KRI RY+   RD GI +  GG+     L G+VD+++A DV+D KST  YVF L GGA+S  S+KQ +VT S+TEAE+++        V+L  ++  IG   +  TT+F D  SAI LSK    H  S++I VR+H +RE V +G++ L Y  T DQ++DI+ K +    F
Sbjct:  115 TATRPDLIYSVNLVSRYMERPNEQHMATAKRILRYVQGTRDFGIQYKYGGEQK---LVGYVDSDYAGDVDDFKSTFEYVFMLGGGAVSWVSKKQPIVTLSTTEAEFVSVAYGACHAVWLRNIMAEIGSEQKEGTTMFCDNSSAIKLSKNPVLHGRSKHIHVRFHYLRELVNDGVIQLDYCSTHDQISDIMTKAVKLEAF 310          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F)

HSP 1 Score: 146 bits (368), Expect = 3.880e-40
Identity = 77/201 (38.31%), Postives = 125/201 (62.19%), Query Frame = 0
Query:    1 MYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 201
            +Y STR R +IA+A    A    DP ++ ++  KRI RYL+  + LG+ +  K+      G+ DA+WA D++D+KS +GY+FK+ G A+S  S+KQ  V  S+ EAEY+A   A +E V++  LL  +     G+T ++ED +SAI +++    H  +++I ++ H IR+ V  G + LK  +T D +AD+L KGL+++KF
Sbjct:   35 LYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLY-SKNTEKECIGYSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGLTQVKF 234          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 151 bits (382), Expect = 5.630e-40
Identity = 83/199 (41.71%), Postives = 121/199 (60.80%), Query Frame = 0
Query:    5 TRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-GLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKFR 202
            T  R ++ +   L +R M +P     +T KRI RYL    D GI +  +  G   L G+ D+++A D++D KST+GYVF L GGA++  SRKQ +VT SSTEAEY+AA     + ++++ +LG IGF      TLF D  S I LSK +  H  S++I+VR+H +RE  +EG++ L +  T +QLADI+ K L    F+
Sbjct:  281 TATRPDLMFVVCLISRFMANPTELHLATAKRIMRYLKGTLDFGIWYRRERKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVHCNTEEQLADIMTKPLKMASFQ 479          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A151SR20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SR20_CAJCA)

HSP 1 Score: 147 bits (371), Expect = 6.090e-40
Identity = 87/201 (43.28%), Postives = 123/201 (61.19%), Query Frame = 0
Query:    1 MYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 201
            MY +T  R +I YA  L +R ME P        KR+FRYL    DLG+ F  K NG  L GF D+N+A D++D++ST+G+VF +  GAIS  S+KQQ+VT S+TEAE+IAA  +  + ++L  +L  + F  +G T +  D  S I LS+    H  S++I VR+H +R+ V E I+ L Y ++ DQ+ADIL K L    F
Sbjct:   91 MYLTTT-RPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDLGV-FYKKINGSILTGFTDSNYAGDMDDRRSTSGHVFMIGSGAISWASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEELHFYQQGPTVIHCDNSSTIKLSRNPILHGRSKHIDVRYHFLRDLVIEKIIDLVYCRSEDQVADILTKPLKLEAF 289          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A139WJX6_TRICA (Copia protein-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WJX6_TRICA)

HSP 1 Score: 153 bits (387), Expect = 6.360e-40
Identity = 82/201 (40.80%), Postives = 125/201 (62.19%), Query Frame = 0
Query:    1 MYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 201
            M+A+   R +I YA ++ +R   +P     +  KRIF+YL   ++LGI +   +N   L G+ DA++A D++ +KST+G+VFKL  GAI+ CSR+Q+ ++ S+TEAEY+AA +A KE V++ GLL  +G  C G   L  D +SAI L K    H  +++I VR+H +RE    G + LKY  + +Q+AD+  K L   KF
Sbjct:  433 MFAAISARPDIMYAVNVVSRYQNNPTIAHVNAVKRIFKYLKGTKELGILY---NNSGKLIGYSDADYANDIDSRKSTSGFVFKLGDGAITWCSRRQRCISLSTTEAEYVAASEATKEAVWISGLLSEVGEKC-GGVALCVDNQSAIKLVKNPMFHKRTKHIDVRYHFVREKYENGDIVLKYVPSTEQVADVFTKALCYAKF 629          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 154 bits (390), Expect = 7.380e-40
Identity = 86/200 (43.00%), Postives = 116/200 (58.00%), Query Frame = 0
Query:    1 MYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLK 200
            MYA    R +IAYA  L ++    P  E ++   R F+YL    D  + + GK     L G+VD++WA D  D++S +GYVF L G AIS  S+KQQ V  SSTEAEY+AA  A KE V+L  LL  +       T L  D + AI L+K    H  +++I VR H +R+ V +G +A +Y  T DQ+AD+L KGLSR K
Sbjct: 1195 MYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSREK 1394          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A1X7UZ54_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UZ54_AMPQE)

HSP 1 Score: 145 bits (367), Expect = 7.540e-40
Identity = 79/204 (38.73%), Postives = 123/204 (60.29%), Query Frame = 0
Query:    1 MYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGST---TLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 201
            +Y S + R +I +A  LAAR   +P  +  +  KRIFRYL    + G+ F  K N   + GF DA+W  DV D KST+GY+F++ G A++  S+KQ  V  S+ EAEY+A   A +E  +L+ L   +    +GST    ++ED +SAI+++K    H   ++I +++H IR+ VR+ I+ L Y +T + +AD+L K L R+KF
Sbjct:   40 LYLSMKTRPDITFAVGLAARFSSNPTSQHLTAVKRIFRYLRKTTNYGLLF-RKRNSKSITGFSDADWGGDVTDCKSTSGYIFQIGGTAVTWQSKKQSCVALSTAEAEYVALSSAAQEATWLKQLNQDL----QGSTDPIVIYEDNQSAISIAKNPQFHGRVKHINIKYHFIRDQVRDNIIKLVYCETSEMIADMLTKALGRIKF 238          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 148 bits (373), Expect = 7.590e-40
Identity = 81/192 (42.19%), Postives = 117/192 (60.94%), Query Frame = 0
Query:    5 TRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITF--GGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAK 194
            T  R ++ Y+ ++ +R ME+P  E     K I RY+      GI +  GG+     L G+VD+++A D +D+KST+G+ F   GGA+S  S+KQ +VT S+TEAEY+AA     + V++  +L  IGFG    T LF D  SAI LSK    H  S++I VR+H +RE V EGI++ +Y  T +QLADI+ K
Sbjct:  135 TATRPDLIYSVNVVSRYMENPREEHMMAVKHIMRYVKGTAGFGIQYLCGGEEK---LVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTK 323          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 154 bits (389), Expect = 1.000e-39
Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 0
Query:    5 TRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITF--GGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKFRD 203
            T  R ++ ++ +L +R ME P  +     KRI RY+    DLGI +  GG +    L GFVD+++A DV+D+KST+GYVF L GGAI+  S+KQ +VT S+TEAE+++A     + V+L  +L  IG    G T +F D  S I LSK    H  S++I VR+H +RE V+EG + L Y  T DQ+ADI+ K + R  F +
Sbjct: 1125 TTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATE---LVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEE 1322          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6D2JBX5_9BRAS7.070e-4142.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000901F6761.220e-4041.21uncharacterized protein LOC109128812 n=1 Tax=Camel... [more]
UPI001C093D0F3.880e-4038.31LOW QUALITY PROTEIN: secreted RxLR effector protei... [more]
A0A1J3D358_NOCCA5.630e-4041.71Retrovirus-related Pol polyprotein from transposon... [more]
A0A151SR20_CAJCA6.090e-4043.28Retrovirus-related Pol polyprotein from transposon... [more]
A0A139WJX6_TRICA6.360e-4040.80Copia protein-like Protein n=1 Tax=Tribolium casta... [more]
A0A4Y9ZJA2_9AGAM7.380e-4043.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A1X7UZ54_AMPQE7.540e-4038.73Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
UPI0006A737CF7.590e-4042.19uncharacterized mitochondrial protein AtMg00810-li... [more]
Q9C7Y1_ARATH1.000e-3942.79Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..201
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 7..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig588contigH-paniculata_contig588:22893..23504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig588.13498.1mRNA_H-paniculata_contig588.13498.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig588 22872..23504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig588.13498.1 ID=prot_H-paniculata_contig588.13498.1|Name=mRNA_H-paniculata_contig588.13498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITF
GGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVT
WSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSK
GSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLK
FRD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like