prot_H-paniculata_contig58539.13457.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig58539.13457.1
Unique Name	prot_H-paniculata_contig58539.13457.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	114

Homology

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.590e-36
Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 0

Query:    3 TISNRFASFGRG-ASGSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            T  +RF+ FGRG A  ST+   +  SE+++L E+VAGE+E YKSLFI  DELDCREVL WW+R G+  FP LAPVAQQVFG+QAA +QVERDFS    LL  NRSR++TYWVE
Sbjct:  136 TRKSRFSLFGRGDARSSTDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVE 248

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.350e-33
Identity = 70/115 (60.87%), Postives = 83/115 (72.17%), Query Frame = 0

Query:    1 ATTISNRFASFGRG-ASGSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            AT    RFAS  R    G TE   E  SE+K L + V+ E+ER+++L++T +ELD REVL WWR  GRK FPCLAPVAQQV G+QA AAQVERDFS C NLL  NRSR++TYWVE
Sbjct:  445 ATKARPRFASLARNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVE 559

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 1.190e-32
Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0

Query:   36 VAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            V+ EIERY SL+IT +ELD RE+L WWR+ GRK FP LAPVAQQVFG+QA AAQVERDFS C NLL  NRSR++TYWVE
Sbjct:    8 VSQEIERYHSLYITAEELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVE 86

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.310e-28
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 0

Query:   40 IERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            I+R+++L++T +ELD REVL WWR  GRK FP LAPVAQQV G+QA AAQVERDFS C NLL  NRSR++TYWVE
Sbjct:   87 IDRFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVE 161

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.440e-18
Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0

Query:   32 LDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            ++E V+GEI RYK +F+ P +L   +VL +W + G++ FP L  VAQQ FGSQA+AAQ+ERDFS C      NRSR E YW+E
Sbjct:  466 VEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLE 548

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.980e-16
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 0

Query:   19 TEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            T GA E        D  VAGEI+R ++L +   +L  R+VL +W++ GR AFP L  VAQQ FGSQA AAQ+ERDFS    L  +NR+R++ YWVE
Sbjct:  348 TAGAVEQSGSGDDGDLSVAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVE 443

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 5.760e-15
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0

Query:   70 FPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            FP LAPVAQQV G+QA AAQVERDFS C NLL  NRSR++TYWVE
Sbjct:    2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVE 46

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.890e-13
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 0

Query:   57 EVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            EVL +W R G+ AFP L  VAQQ FG+QA+AA VERDFS C   +V NRSRV+ YWVE
Sbjct:  389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVE 446

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 2.070e-11
Identity = 48/111 (43.24%), Postives = 58/111 (52.25%), Query Frame = 0

Query:    6 NRFASFGRGA---SGSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWV 113
            N F+ FGR     S S EG  + V EE      V+GEI               R+VL +W + G +  P L  VAQQ FGSQA+AAQ+ERDFS C      NRSR E YW+
Sbjct:  563 NDFSMFGRNEVAPSQSDEGDVDFVEEE------VSGEI--------------MRDVLTYWNKVGEQMLPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWL 653

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BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 9.050e-10
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0

Query:   17 GSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 114
            G T+   E  SE+K L + V+ E+ER+++L++T                           A +V G+QA AAQVERDFS C NLL  NRSR++TYWVE
Sbjct:  192 GDTKDVGEGDSEDKVLMQQVSQELERFQALYMT---------------------------AGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVE 262

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
A0A6H5JZQ5_9PHAE	1.590e-36	62.83	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KZ46_9PHAE	1.350e-33	60.87	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KSA7_9PHAE	1.190e-32	73.42	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JVT2_9PHAE	1.310e-28	69.33	Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ec...	[more]
A0A6H5JB08_9PHAE	1.440e-18	53.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFQ8_9PHAE	1.980e-16	50.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KP16_9PHAE	5.760e-15	77.78	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5K8W6_9PHAE	1.890e-13	63.79	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5K0P1_9PHAE	2.070e-11	43.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KBM2_9PHAE	9.050e-10	40.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 39..111 e-value: 3.1E-7 score: 30.1
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 27..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig58539	contig	H-paniculata_contig58539:386..984 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig58539.13457.1	mRNA_H-paniculata_contig58539.13457.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig58539 386..985 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig58539.13457.1 ID=prot_H-paniculata_contig58539.13457.1|Name=mRNA_H-paniculata_contig58539.13457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
ATTISNRFASFGRGASGSTEGADEHVSEEKQLDEIVAGEIERYKSLFITP
DELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNL
LVANRSRVETYWVE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf