mRNA_H-paniculata_contig58539.13457.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.590e-36 Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 1
Query: 7 TISNRFASFGRG-ASGSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
T +RF+ FGRG A ST+ + SE+++L E+VAGE+E YKSLFI DELDCREVL WW+R G+ FP LAPVAQQVFG+QAA +QVERDFS LL NRSR++TYWVE
Sbjct: 136 TRKSRFSLFGRGDARSSTDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVE 248
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.350e-33 Identity = 70/115 (60.87%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 1 ATTISNRFASFGRG-ASGSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
AT RFAS R G TE E SE+K L + V+ E+ER+++L++T +ELD REVL WWR GRK FPCLAPVAQQV G+QA AAQVERDFS C NLL NRSR++TYWVE
Sbjct: 445 ATKARPRFASLARNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVE 559
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.190e-32 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 1
Query: 106 VAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
V+ EIERY SL+IT +ELD RE+L WWR+ GRK FP LAPVAQQVFG+QA AAQVERDFS C NLL NRSR++TYWVE
Sbjct: 8 VSQEIERYHSLYITAEELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVE 86
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.310e-28 Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 118 IERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
I+R+++L++T +ELD REVL WWR GRK FP LAPVAQQV G+QA AAQVERDFS C NLL NRSR++TYWVE
Sbjct: 87 IDRFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVE 161
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 1.440e-18 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 94 LDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
++E V+GEI RYK +F+ P +L +VL +W + G++ FP L VAQQ FGSQA+AAQ+ERDFS C NRSR E YW+E
Sbjct: 466 VEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLE 548
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 1.980e-16 Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 55 TEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
T GA E D VAGEI+R ++L + +L R+VL +W++ GR AFP L VAQQ FGSQA AAQ+ERDFS L +NR+R++ YWVE
Sbjct: 348 TAGAVEQSGSGDDGDLSVAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVE 443
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 5.760e-15 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 1
Query: 208 FPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
FP LAPVAQQV G+QA AAQVERDFS C NLL NRSR++TYWVE
Sbjct: 2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVE 46
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.890e-13 Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 169 EVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
EVL +W R G+ AFP L VAQQ FG+QA+AA VERDFS C +V NRSRV+ YWVE
Sbjct: 389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVE 446
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 2.070e-11 Identity = 48/111 (43.24%), Postives = 58/111 (52.25%), Query Frame = 1
Query: 16 NRFASFGRGA---SGSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWV 339
N F+ FGR S S EG + V EE V+GEI R+VL +W + G + P L VAQQ FGSQA+AAQ+ERDFS C NRSR E YW+
Sbjct: 563 NDFSMFGRNEVAPSQSDEGDVDFVEEE------VSGEI--------------MRDVLTYWNKVGEQMLPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWL 653
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 9.050e-10 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 1
Query: 49 GSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPDELDCREVLLWWRRQGRKAFPCLAPVAQQVFGSQAAAAQVERDFSCCRNLLVANRSRVETYWVE 342
G T+ E SE+K L + V+ E+ER+++L++T A +V G+QA AAQVERDFS C NLL NRSR++TYWVE
Sbjct: 192 GDTKDVGEGDSEDKVLMQQVSQELERFQALYMT---------------------------AGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVE 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig58539.13457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig58539.13457.1 >prot_H-paniculata_contig58539.13457.1 ID=prot_H-paniculata_contig58539.13457.1|Name=mRNA_H-paniculata_contig58539.13457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp ATTISNRFASFGRGASGSTEGADEHVSEEKQLDEIVAGEIERYKSLFITPback to top mRNA from alignment at H-paniculata_contig58539:386..985+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig58539.13457.1 ID=mRNA_H-paniculata_contig58539.13457.1|Name=mRNA_H-paniculata_contig58539.13457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=600bp|location=Sequence derived from alignment at H-paniculata_contig58539:386..985+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig58539:386..985+ >mRNA_H-paniculata_contig58539.13457.1 ID=mRNA_H-paniculata_contig58539.13457.1|Name=mRNA_H-paniculata_contig58539.13457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig58539:386..985+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |