prot_H-paniculata_contig5841.13447.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5841.13447.1
Unique Nameprot_H-paniculata_contig5841.13447.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length440
Homology
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BLAST of mRNA_H-paniculata_contig5841.13447.1 vs. uniprot
Match: D7FHD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD0_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 2.470e-40
Identity = 93/231 (40.26%), Postives = 143/231 (61.90%), Query Frame = 0 
Query:  220 RSAGLRVDRTECSRVLPTPLL------------ESEGWLLAVHIDRASTTAPAYNRQLRGRDEVRRVMEGRHRDLLPHQYFVRVVEATLTAIADAEAGASVDIVIFSEGRAEGGLVDEVGMIVEWDVPLEVCQRLRLTCTQTTVSLH--LSGSNPDALQCVAVADVLISSESSFSKAAAALSENVKIVTDAWEDDEDEQIVIISPLRTMSGAAMALGDRREFGRVIREYHD 436
            R  G+  DR +C+ VLP   +            +SE WL++VH+DRA ++    +++LRG   +       HR L PHQY+VR +EA+L +IA AE GA VD+ IFSEG+  GG+VDE+G+ + WDV  E C  L L C+Q  V L+   +  +  +L+C+A +D+ I+SES FS+A A LS++VK++TD WE DE+E +V ++P  T++G  M    R+    ++ +YH+
Sbjct:   49 RGLGVPPDREQCAGVLPDSFMMQHGGGGGEDGRDSESWLVSVHVDRAPSSVDL-SKRLRGAAPL-------HRSL-PHQYYVRAMEASLHSIAVAEPGAHVDVAIFSEGQW-GGMVDEMGLPLYWDVAGETCDDLGLHCSQHVVLLNERTAPESSQSLECIAASDLFIASESKFSRAGAVLSDHVKVLTDRWEMDEEEMMVALNPATTIAG--MPDSQRQLLRTLVADYHE 267
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BLAST of mRNA_H-paniculata_contig5841.13447.1 vs. uniprot
Match: A0A6H5L6Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y9_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 2.220e-39
Identity = 94/231 (40.69%), Postives = 142/231 (61.47%), Query Frame = 0 
Query:  220 RSAGLRVDRTECSRVLPTPLL------------ESEGWLLAVHIDRASTTAPAYNRQLRGRDEVRRVMEGRHRDLLPHQYFVRVVEATLTAIADAEAGASVDIVIFSEGRAEGGLVDEVGMIVEWDVPLEVCQRLRLTCTQTTVSLH--LSGSNPDALQCVAVADVLISSESSFSKAAAALSENVKIVTDAWEDDEDEQIVIISPLRTMSGAAMALGDRREFGRVIREYHD 436
            R  G+  DR +C+ VLP   +            +SE WL++VH+DRA ++    +++LRG   +       HR L PHQY+VR +EA+L +IA AE GA VD+ IFSEG+  GG+VDE+G+ + WDV  E C  L L CTQ  V L+   +  +  +L C+A +D+ I+SES FS+A A LS++VK++TD WE DE+E +V ++P  T++G  M    R+    ++ +YH+
Sbjct:  154 RGLGVPPDREQCAGVLPDSFMMQHGGGGAEDGRDSESWLVSVHVDRAPSSVDL-SKRLRGAVPL-------HRSL-PHQYYVRAMEASLHSIAVAEPGAHVDVAIFSEGQW-GGMVDEMGLPLYWDVAGETCDDLGLHCTQHVVLLNERTAPESSQSLDCIAASDLFIASESKFSRAGAVLSDHVKVLTDRWEMDEEEMMVALNPATTIAG--MPDSQRQLLRTLVADYHE 372
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5841.13447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHD0_ECTSI2.470e-4040.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6Y9_9PHAE2.220e-3940.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..439
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5841contigH-paniculata_contig5841:2965..10599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5841.13447.1mRNA_H-paniculata_contig5841.13447.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5841 2780..12179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5841.13447.1 ID=prot_H-paniculata_contig5841.13447.1|Name=mRNA_H-paniculata_contig5841.13447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=440bp
MLDMNGESTIISELFHSPRAHRRSRSANSWTVTTPASVLPRDTNRFFADD
DSLTSPEGSHTSNQRHTRPSCEHSSSSSRELSFGQKSSSPVVPSIASCYL
ASTVPSNLALSRRRFALLLAAAMSLCAMILWSNSGGSTSNHPKLSTSPLQ
ISSPRNLLRGPGLSAAVTTPIDQPDDHSDGNTSSSSTGERRQQPAAAAAA
KVEVKCGHREKGHELSATMRSAGLRVDRTECSRVLPTPLLESEGWLLAVH
IDRASTTAPAYNRQLRGRDEVRRVMEGRHRDLLPHQYFVRVVEATLTAIA
DAEAGASVDIVIFSEGRAEGGLVDEVGMIVEWDVPLEVCQRLRLTCTQTT
VSLHLSGSNPDALQCVAVADVLISSESSFSKAAAALSENVKIVTDAWEDD
EDEQIVIISPLRTMSGAAMALGDRREFGRVIREYHDYGQ*
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