prot_H-paniculata_contig5817.13423.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5817.13423.1
Unique Nameprot_H-paniculata_contig5817.13423.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length142
Homology
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BLAST of mRNA_H-paniculata_contig5817.13423.1 vs. uniprot
Match: D8LNJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ5_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 5.260e-54
Identity = 97/140 (69.29%), Postives = 112/140 (80.00%), Query Frame = 0 
Query:    3 TITLPRNVKSAYAGTFEGRPSSLQQAVRLLFSFPDEKTVSVQKDASSRIMGLTPVETRGGGVA-ASWISVTAVEGSSCAKAGMPVGENSILTHVNGFDVSPAAYRSLAPAPFGGGEGWGAAVLPAVEGGERGDCITITFV 141
            T+ LPRNVKSAYAGTFEGRPSS QQA RL FSFP E+TV++Q+ A+   +GL  VETRGGG A  SW+++TA + S CA AG+PVGE S+LTHVNGFDVSP AYRSLAP  FG GEGW AAVLPA+E G  GD IT+TFV
Sbjct:  539 TVALPRNVKSAYAGTFEGRPSSFQQAARLWFSFPGERTVTLQRQATLEKLGLLHVETRGGGGAIGSWVTITAADASPCAAAGVPVGETSLLTHVNGFDVSPPAYRSLAPRAFGDGEGWAAAVLPALESGG-GDSITLTFV 677
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5817.13423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNJ5_ECTSI5.260e-5469.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5817contigH-paniculata_contig5817:12359..12784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5817.13423.1mRNA_H-paniculata_contig5817.13423.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5817 12359..13075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5817.13423.1 ID=prot_H-paniculata_contig5817.13423.1|Name=mRNA_H-paniculata_contig5817.13423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
MHTITLPRNVKSAYAGTFEGRPSSLQQAVRLLFSFPDEKTVSVQKDASSR
IMGLTPVETRGGGVAASWISVTAVEGSSCAKAGMPVGENSILTHVNGFDV
SPAAYRSLAPAPFGGGEGWGAAVLPAVEGGERGDCITITFV*
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