mRNA_H-paniculata_contig5771.13355.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: A0A6H5J6U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6U0_9PHAE) HSP 1 Score: 199 bits (506), Expect = 3.900e-60 Identity = 129/263 (49.05%), Postives = 152/263 (57.79%), Query Frame = -1
Query: 3 ATKAHACYTAGNYADALFHLSQLTVASPSNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGDFRTLHNRTLCQHALQGFTDPAKLEEALDAIRMQLRRKGKGEDG--------DDDGQGSV--------SEEVGGDAAPGCSGGA---ALAAVGLRDLDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALNSTGGAGD 734
AT+A A YTAG Y++AL HLS L+VA P ++G + DFR HN L +H +GF DPAKLE L AI +L R DG DDD S + G G SGGA A A GL +LD DASVLL+NLSAL FQQKQYGAAQAVLE LFLHIEP+D+SLAIHIC LLLDVLCH+ARGNLH + +L RF+ Q+AVV+ FLER +ALNS+ G GD
Sbjct: 2 ATQALASYTAGKYSEALSHLSNLSVA-PGSSGDAGGSSSD---------------------------ASSDFRAQHNLALSEHGARGFADPAKLESTLRAIHSRLARASASGDGSNNYSDAEDDDASDQEQANASRRSSRALTGALVVGTSGGARAAATAVAGLAELDVDASVLLYNLSALRFQQKQYGAAQAVLERLFLHIEPLDDSLAIHICLLLLDVLCHSARGNLHTEDNLRRFSAQTAVVLAFLERPHALNSSSGGGD 236
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: D7FLM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM7_ECTSI) HSP 1 Score: 189 bits (480), Expect = 3.260e-51 Identity = 122/258 (47.29%), Postives = 147/258 (56.98%), Query Frame = -1
Query: 18 ATKAHACYTAGNYADALFHLSQLTVASPSNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGDFRTLHNRTLCQHALQGFTDPAKLEEALDAIRMQLRRKGKGEDGDDDGQGSV----------------SEEVGGDAAPGCSGGA---ALAAVGLRDLDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALNST 734
AT+A + YTAG Y++AL HLS L+VA P ++G + DFR HN L +H +GF DPAKLE L AI +L R G DG S + G G SGGA A AA GL +LD DASVLL+NLSAL FQQKQYGAAQAVLE LFLH+EP+D+SLAIHIC LLLDVLCH+ARGNLH + +L RF+ Q+A V+ FLER +ALNS+
Sbjct: 2 ATQALSSYTAGKYSEALSHLSSLSVA-PGSSGDAGGSSSD---------------------------ASNDFRAQHNLALSEHGARGFADPAKLESTLRAIHSRLARASAGGDGXXXXXXXXXXXXXXXXXXXXXXXSSRALTGTLVVGTSGGARAAATAAAGLAELDVDASVLLYNLSALRFQQKQYGAAQAVLERLFLHMEPLDDSLAIHICLLLLDVLCHSARGNLHTEDNLRRFSAQTAAVLAFLERPHALNSS 231
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: A0A836CBQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ7_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.820e-42 Identity = 92/181 (50.83%), Postives = 117/181 (64.64%), Query Frame = -1
Query: 18 DFRTLHNRTLCQHALQGFTDPAKLEEALDAIRMQLRRK------------GKGEDGDDDGQGSVSEEVGGDAAPGCSGGAALAAVGLRDLDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALNST 524
D HN +C++A GF + + AL +R +LR + G G+ G+D G+ S + AA AA GL DLD DASV+L+N++ALHFQQ QYGAA+A+LEHLFLHIEPVDE LAIHICFLLLD LCH+ARG LH A RFAQQ++VV+ FLER +ALN++
Sbjct: 56 DLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYRQGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNAS 236
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: A0A7S2XY66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY66_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.830e-33 Identity = 59/94 (62.77%), Postives = 77/94 (81.91%), Query Frame = -1
Query: 9 DADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALNSTGGA 290
D D S+LL+NL+ LHFQ+K+YG + VLEHL+L+IEPVDE LA+HICFLLLDVL HTARGNL+ + RFAQQ+A ++ FLE+ +ALNS+ G+
Sbjct: 15 DPDPSILLYNLALLHFQEKRYGECRRVLEHLYLNIEPVDEDLALHICFLLLDVLIHTARGNLYTAGEVDRFAQQTATILAFLEKPHALNSSSGS 108
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: K8YV70_NANGC (CCR4-NOT transcription complex subunit 10 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV70_NANGC) HSP 1 Score: 101 bits (251), Expect = 1.500e-20 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = -1
Query: 18 DFRTLHNRTLCQHALQGFTDPAKLEEALDAIRMQLRRKGKGEDGDDDGQGSVSEEVGGDAAPGCSGGAALAAVGLR-------------DLDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALNST 524
D R N L +HA GF P +++ + +R L+ + SE+VG GA A LR D + D SVLL+NL+AL+F +KQYGA+Q +L LF IE ++E LA+ +CFL LDVL H+ARGN+H R + +A ++ +LER +A +ST
Sbjct: 41 DPRLQGNLVLTEHAKGGFKRPLIIKDRITTLRNSLKTR--------------SEKVG------SVQGAFRAKESLRLDAEDEDGDEEADDTETDTSVLLYNLAALNFHEKQYGASQHILHALFARIEVLEEPLAVQVCFLFLDVLLHSARGNIHTVKDRERLSHNTAALLAYLERPHAFSST 202
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: A0A2D4BX71_PYTIN (CCR4-NOT transcription complex subunit, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX71_PYTIN) HSP 1 Score: 80.9 bits (198), Expect = 1.320e-13 Identity = 42/101 (41.58%), Postives = 67/101 (66.34%), Query Frame = -1
Query: 3 LDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALN----STGGAGD 293
L+ +A+ L +NL+A FQQKQY AA AVLE L H+ PVDE +A+H+CFL LDV+ H++RG + + S +++ ++ +L++ ++ N ST +GD
Sbjct: 123 LEREAAWLRYNLAASLFQQKQYAAASAVLEALLRHLGPVDEKVAMHVCFLYLDVILHSSRGCVSTERERSAALKKAQSILAYLDKPHSFNGLAASTQASGD 223
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: A0A067CR31_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CR31_SAPPC) HSP 1 Score: 80.5 bits (197), Expect = 1.740e-13 Identity = 74/272 (27.21%), Postives = 119/272 (43.75%), Query Frame = -1
Query: 24 MIGSDMNGTATKAHACYTAGNYADALFHLSQLTVASPSNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGDF--RTLHNRTLCQHALQGFTDPAKLEEALDAIRMQLRRKGKGEDGDDDGQGSVSEEVGGDAAPGCS------------------------GGAALAAVGLRDLDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALN 761
M GS ++ A +A A AG YADA+ L QL+ S TG R HN L Q L G + PA+ E AL ++ ++ QGSVS+ D+ G S G L+ L ++ DA++L +NL+A +F+Q++Y +A ++L+ L +EP+DE +A+HICFL LDVL H++R + +++L+ Q++ ++ +LE + N
Sbjct: 1 MDGSSLSSVAARAQAHLAAGKYADAVELLGQLSAYDGSEK-------------------------------KGTKEKTGPMKSRVQHNLALAQ-LLAGKSKPAEFESALASLLSEM-------------QGSVSQLQHADSMLGLSLKLRKEKDNWDDDSDYEKPRSIVFSGVNLSFQSLS-MERDATLLRYNLAACYFRQQKYASASSILDALLRAMEPMDEVVAMHICFLYLDVLLHSSRSSAMSESALTNMRQKAHALLAYLESPHGFN 226
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: A0A485LG64_9STRA (Aste57867_20881 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG64_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.780e-13 Identity = 36/90 (40.00%), Postives = 64/90 (71.11%), Query Frame = -1
Query: 24 LDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALN 293
++ DAS+L +NL+ ++F+QK+Y AA ++L+ L IEP+DE++A+HICFL LDV+ H++R + +A+ S+ ++ +V +LE + N
Sbjct: 156 MERDASLLRYNLAVVYFRQKKYAAATSILDVLLRAIEPMDETVAMHICFLYLDVILHSSRSSSTSEAAHSQLRHKAQAIVSYLESPHGFN 245
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: A0A8K1CGS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGS1_PYTOL) HSP 1 Score: 77.4 bits (189), Expect = 1.940e-12 Identity = 36/90 (40.00%), Postives = 60/90 (66.67%), Query Frame = -1
Query: 24 LDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGNLHDQASLSRFAQQSAVVVGFLERSNALN 293
++ +AS + +NL+A FQQKQY AA AVLE L +IEP+DE +A+H+CFL LD++ H++RG + +++ ++ +LE+ + N
Sbjct: 97 MEREASFIRYNLAASLFQQKQYAAASAVLEVLLRNIEPIDEKVAMHVCFLYLDIILHSSRGCVVTDRERHTSLKKAQSILAYLEKPHGFN 186
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Match: A0A024US16_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US16_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 6.600e-12 Identity = 37/92 (40.22%), Postives = 63/92 (68.48%), Query Frame = -1
Query: 24 LDADASVLLFNLSALHFQQKQYGAAQAVLEHLFLHIEPVDESLAIHICFLLLDVLCHTARGN--LHDQASLSRFAQQSAVVVGFLERSNALN 293
++ DAS+L +NL+ ++F+QK+Y AA ++L+ L IEP+DE++A+HICFL LDV+ H++R N + A S Q++ ++ +LE + N
Sbjct: 167 MERDASLLRYNLALVYFRQKKYAAAASLLDVLLRAIEPMDENVAMHICFLYLDVILHSSRSNSIIEAAAPSSALRQKADALIAYLESPHTFN 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5771.13355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5771.13355.1 >prot_H-paniculata_contig5771.13355.1 ID=prot_H-paniculata_contig5771.13355.1|Name=mRNA_H-paniculata_contig5771.13355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp MWIANDSSTGSMCKNKCSSTACAAPYCFCWKCRADRLNSNTEASASRSLSback to top mRNA from alignment at H-paniculata_contig5771:9251..10047+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5771.13355.1 ID=mRNA_H-paniculata_contig5771.13355.1|Name=mRNA_H-paniculata_contig5771.13355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=797bp|location=Sequence derived from alignment at H-paniculata_contig5771:9251..10047+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5771:9251..10047+ >mRNA_H-paniculata_contig5771.13355.1 ID=mRNA_H-paniculata_contig5771.13355.1|Name=mRNA_H-paniculata_contig5771.13355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1056bp|location=Sequence derived from alignment at H-paniculata_contig5771:9251..10047+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |