mRNA_H-paniculata_contig57583.13330.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig57583.13330.1
Unique NamemRNA_H-paniculata_contig57583.13330.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 219 bits (559), Expect = 2.230e-62
Identity = 125/322 (38.82%), Postives = 179/322 (55.59%), Query Frame = 1
Query:    1 DPKSAAEELKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLPP--------------DLYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDD-LVIAGRREKVDDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVKISAPESADKPSEPKSDNSTEYRGMVGSLMYASTGTSPDI 921
            DP +  E L  PEA+ W  AM EE  +   N TW      +LP G++AI TKW+FK K   +G + RYKARLV +G S  +G D+ ET +PV R ++LR  F++AA+HD  +  +D   A+LN  ++EE+F+K P                LYGLKQ+ + WN+ L++  + +GL RS  D C+YF   E   + + VA+YVDD LV +  ++     K+ +S + +MKD+GS S VLG+ V+RD     I + Q   I  VLKR+G D+C  V  P+    K++         E K      Y   VGSL+YA+  T PDI
Sbjct:  232 DPVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDI 548          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 211 bits (538), Expect = 6.610e-62
Identity = 123/316 (38.92%), Postives = 177/316 (56.01%), Query Frame = 1
Query:   25 LKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLP--------PD--------LYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIA-GRREKVDDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVKISAPESADKPSEPKSDNSTEYRGMVGSLMYASTGTSPDI 921
            ++  +A KW EA   E+ +L KN TW+      LP GRKAI +KW+FK K   +G + RYKARLVA+GF    G DF ET APVA+ +++R   S+AA++   L  MDV  A+LN  +EEE+++K P        PD        LYGLKQS R WN T+D+F   IG  +  TD C+Y  RD+  +  + V +YVDDL++A    + +   K  +S+RF M DLG L   LG+EV RD  +G +++ Q   +  VL ++G  +C+ V  P    +K++            +     YR  VG++MY   GT PD+
Sbjct:    1 MESSDASKWKEACESEFESLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVDAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDL 311          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: A0A8D8HJI9_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8HJI9_CULPI)

HSP 1 Score: 213 bits (541), Expect = 1.410e-61
Identity = 124/321 (38.63%), Postives = 176/321 (54.83%), Query Frame = 1
Query:    4 PKSAAEELKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLPP--------------DLYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIAGRREK-VDDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVKISAPESADKPSEPKSDNSTEYRGMVGSLMYASTGTSPDI 921
            P S  E  K  +  KW +A+ EE  +L KN TW+   P   P G + +  KW+FK K   DG V RYKARLVA+GF+   G DF ET +PVA+M+TLR   +LA    + L  MDV  A+LN  ++E++++  PP               +YGLKQS RNWN   DD+   +G  RS  D CLY  + +G  T +L+  YVDD++IAG   K +   K  +S  F MKD+      LG+ + RDR  G++TI Q +    VLKR+G + C+  P+P+  ++K+          +PK      Y+ +VG LMY +  + PDI
Sbjct:    3 PSSVGELRKRQDWPKWEQAIQEELTSLAKNDTWRLVAP---PDGARIVDNKWVFKVKKNGDGTVERYKARLVARGFTQRAGFDFSETYSPVAKMATLRILLALANHEGWHLHQMDVKCAFLNGSLDEDIYMCQPPGFERGKDLVCKLNRSIYGLKQSSRNWNRRFDDYVTKLGFKRSQHDLCLYHWKADGVVTYMLI--YVDDILIAGNDLKAIRALKGKLSTEFEMKDMEEAKIFLGLRIDRDRKAGSMTIDQKAYTLGVLKRFGMENCKSSPVPMQPRLKLER-------GDPKELTEKPYKELVGCLMYLTVTSRPDI 311          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM)

HSP 1 Score: 205 bits (522), Expect = 3.860e-61
Identity = 114/297 (38.38%), Postives = 173/297 (58.25%), Query Frame = 1
Query:   55 EAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLP--------PD--------LYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIAGRREKV-DDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVKISAPESADKPSEPKSDNSTEYRGMVGSLMY 894
            EA   E  +L+KN TW   D   LP GRKAI  +W+F+ K  + G + R+KARLVA+GFS   G D+ ET APVA+ +++R   SLAA++  +L  MDV  A+LN  ++E++++  P        PD        LYGLKQS R WN T+DDF + +G  +  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ +  KH +S+RF M DLG L   LG+E++ DR +G +T+ Q   ++ +L ++G  + + V  P    +K++            +  +  YR  VG+LMY
Sbjct:    2 EACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKDNQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKSMCEGGCQHEDTMKNVPYRSAVGALMY 293          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 220 bits (560), Expect = 4.220e-61
Identity = 132/321 (41.12%), Postives = 181/321 (56.39%), Query Frame = 1
Query:    4 PKSAAEELKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLPPD--------------LYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIAGRR-EKVDDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVKISAPESADKPSEPKSDNSTEYRGMVGSLMYASTGTSPDI 921
            P+S AE    PE  +W +AM EE   + + GT+  ED   LPAGR  I  KW+F  K  EDGN++RYKARLVAQG+S   G D+ ET APV R+ ++R A  +AA  D E+  MDV  AYLN  +EEE++++ P                LYGLKQSGR WN   D     IG  +   D C+Y    EG  T  ++ ++VDDL+I     E + + K  +   F +KDLG   +++GIE++RDR NGTI++SQ   I  VL R+G    R V  P+   V I    + D  ++P       Y+ ++GSL+YA+ GT PDI
Sbjct:  879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNV-ILKKRTDDLVADPAMVGG--YQSVIGSLLYAARGTRPDI 1191          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: A0A034VP70_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034VP70_BACDO)

HSP 1 Score: 219 bits (559), Expect = 4.260e-61
Identity = 125/322 (38.82%), Postives = 179/322 (55.59%), Query Frame = 1
Query:    1 DPKSAAEELKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLPP--------------DLYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDD-LVIAGRREKVDDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVKISAPESADKPSEPKSDNSTEYRGMVGSLMYASTGTSPDI 921
            DP +  E L  PEA+ W  AM EE  +   N TW      +LP G++AI TKW+FK K   +G + RYKARLV +G S  +G D+ ET +PV R ++LR  F++AA+HD  +  +D   A+LN  ++EE+F+K P                LYGLKQ+ + WN+ L++  + +GL RS  D C+YF   E   + + VA+YVDD LV +  ++     K+ +S + +MKD+GS S VLG+ V+RD     I + Q   I  VLKR+G D+C  V  P+    K++         E K      Y   VGSL+YA+  T PDI
Sbjct:  751 DPVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDI 1067          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 219 bits (559), Expect = 5.880e-61
Identity = 135/325 (41.54%), Postives = 192/325 (59.08%), Query Frame = 1
Query:    4 PKSAAEELKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLPPD---------------LYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIAGR-REKVDDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVKISA--PESADKPSEPKSDNST-EYRGMVGSLMYASTGTSPDI 921
            P++  E L GP+++ W EA+ +E  +  +N   K   P  +P G K I +K + K K   +GN+ RYK R+VA+GF+  EG D+ E  APVA + ++R   +LAA+HD EL+ MDV  AYLN  + E+L++ LPPD               LYGLKQ+GR WN T D     +G  R   ++CLY  R EGG+   LV +YVDDL++A   R  +D+ K  ++  F+M+DLG  S VLGI++RRDR    I +SQ   I  VLKR G ++C+ V  P+  + +++A  P + D  +E   +N T  Y  +VGSLMYA  GT PDI
Sbjct: 1003 PRTIKEALNGPDSKHWREALDDELNSFEENDV-KEVVP--IPEGVKPITSKIVPKIKFDANGNIERYKIRIVARGFTQREGVDYQEVFAPVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYL-LPPDGVDIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDI 1322          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 214 bits (545), Expect = 6.200e-61
Identity = 121/325 (37.23%), Postives = 192/325 (59.08%), Query Frame = 1
Query:    1 DPKSAAEELKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLPP----------------DLYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIAGRR-EKVDDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVK-ISAPESADKPSEPKSDNSTEYRGMVGSLMYASTGTSPDI 921
            +P + +E L GP AE+W EAM +E  +L ++  W+  +   LP  RKA+  KW+FK K   DG++ R+KARLVAQGFS   G D+ ET +PV R  ++RT  +L+ +   +L  MDV  A+LN  +E+E+++K P                  LYGLKQS R WN+ LD+    IG  ++ +D C+Y   ++G     +VA++VDD+++AG+  EK+   K +I++RF++KD+G L  +LG++V ++  +  + I Q +    ++K+YG + C+ V  PV    K +SA E ++        N  E++  VGSL+Y S+ T PDI
Sbjct:  145 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSEL------FNKEEHQSAVGSLLYLSSATRPDI 456          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: H3H7U0_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7U0_PHYRM)

HSP 1 Score: 211 bits (536), Expect = 6.450e-61
Identity = 119/316 (37.66%), Postives = 182/316 (57.59%), Query Frame = 1
Query:   25 LKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLP--------PD--------LYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIAGRREKV-DDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVGGKVKISAPESADKPSEPKSDNSTEYRGMVGSLMYASTGTSPDI 921
            ++  +A KW EA   E  +L+KN TW   D   LP GRKAI  +W+F+ K  + G + R+KARLVA+GFS   G D+ ET APVA+ +++R   SLAA++  +L  MDV  A+LN  ++E++++  P        PD        LYGLKQS R WN T+DDF + +G  +  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ +  KH +S+RF M DLG L   LG+E+ +D   G +++ Q    +++L+++  D+   V  P    +K++           ++  +  YR  VG LMY   GT PD+
Sbjct:  168 MESSDAVKWKEACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDL 478          
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 217 bits (552), Expect = 4.860e-60
Identity = 123/324 (37.96%), Postives = 188/324 (58.02%), Query Frame = 1
Query:    4 PKSAAEELKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIRTKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLPPD----------------LYGLKQSGRNWNNTLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIAGRRE-KVDDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKRYGFDECRGVPIPVG-GKVKISAPESADKPSEPKSDNSTEYRGMVGSLMYASTGTSPDI 921
            P++  E L+G  A+ W E+M  E+ AL+ N TW   D   LPAG K I +KW+F+ K  ++G + R+K+RLVA+G     G +++ET +PV R  T+R  F++AAE    +  +D+  AYLN+ ++EE++++ P +                +YGLKQSGR WNNTLD+    +G  RS  ++CLY  + + G +   +A+YVDDL+I    E ++   K  IS +F M D GSLS  LG+E++RD   G +++ Q + IR +LK YG   CR V  P+  G +     +S  K       N T+Y+ ++GSLMY +  + PDI
Sbjct:  818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNFISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKV------NVTQYQSLIGSLMYLAILSRPDI 1130          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57583.13330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C9RAA9_9HYME2.230e-6238.82POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
A0A5D6YB57_9STRA6.610e-6238.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8D8HJI9_CULPI1.410e-6138.63Copia protein n=1 Tax=Culex pipiens TaxID=7175 Rep... [more]
H3H934_PHYRM3.860e-6138.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS4.220e-6141.12Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A034VP70_BACDO4.260e-6138.82Retrovirus-related Pol polyprotein from transposon... [more]
A0A409WVI7_9AGAR5.880e-6141.54Integrase catalytic domain-containing protein (Fra... [more]
A0A7D9HZ03_PARCT6.200e-6137.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7U0_PHYRM6.450e-6137.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
W8BWJ0_CERCA4.860e-6037.96Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57583contigH-paniculata_contig57583:7..1038 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score220.3
Seed ortholog evalue1.2e-54
Seed eggNOG ortholog164328.Phyra85518
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size921
Cds size921
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57583.13330.1prot_H-paniculata_contig57583.13330.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig57583 7..1038 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930622.3648741-CDS-H-paniculata_contig57583:6..4161622930622.3648741-CDS-H-paniculata_contig57583:6..416Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig57583 7..416 +
1691481376.7168624-CDS-H-paniculata_contig57583:6..4161691481376.7168624-CDS-H-paniculata_contig57583:6..416Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig57583 7..416 +
1622930622.3802392-CDS-H-paniculata_contig57583:467..9021622930622.3802392-CDS-H-paniculata_contig57583:467..902Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig57583 468..902 +
1691481376.730343-CDS-H-paniculata_contig57583:467..9021691481376.730343-CDS-H-paniculata_contig57583:467..902Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig57583 468..902 +
1622930622.3921347-CDS-H-paniculata_contig57583:962..10381622930622.3921347-CDS-H-paniculata_contig57583:962..1038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig57583 963..1038 +
1691481376.7420273-CDS-H-paniculata_contig57583:962..10381691481376.7420273-CDS-H-paniculata_contig57583:962..1038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig57583 963..1038 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig57583.13330.1

>prot_H-paniculata_contig57583.13330.1 ID=prot_H-paniculata_contig57583.13330.1|Name=mRNA_H-paniculata_contig57583.13330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp
DPKSAAEELKGPEAEKWGEAMAEEWGALVKNGTWKSEDPGRLPAGRKAIR
TKWIFKGKLKEDGNVARYKARLVAQGFSLAEGEDFFETSAPVARMSTLRT
AFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLPPDLYGLKQSGRNWNN
TLDDFFVGIGLHRSTTDSCLYFSRDEGGETNLLVAMYVDDLVIAGRREKV
DDFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSCIREVLKR
YGFDECRGVPIPVGGKVKISAPESADKPSEPKSDNSTEYRGMVGSLMYAS
TGTSPDI
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mRNA from alignment at H-paniculata_contig57583:7..1038+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig57583.13330.1 ID=mRNA_H-paniculata_contig57583.13330.1|Name=mRNA_H-paniculata_contig57583.13330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig57583:7..1038+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCCGAAATCCGCGGCAGAAGAATTAAAGGGTCCAGAGGCGGAAAAATG GGGGGAGGCAATGGCGGAAGAATGGGGGGCGTTGGTGAAAAATGGGACAT GGAAAAGCGAAGACCCGGGGAGGTTACCGGCAGGGCGGAAGGCGATTCGT ACGAAATGGATTTTCAAGGGGAAACTGAAGGAGGACGGCAACGTGGCACG CTACAAAGCGCGACTGGTGGCTCAAGGTTTTTCACTGGCGGAGGGTGAAG ATTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCGACGTTACGTACT GCTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGGACGT AGATGTGGCGTATTTGAACGCCCCGGTAGAAGAAGAGCTGTTTGTTAAGC TTCCCCCCGAGTTTTCCCGCTTCTCCCGAGACGTACCGTTTGTGCGCCGC CTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAA CACTCTTGACGATTTTTTTGTTGGGATAGGACTCCACCGTTCCACTACCG ACTCGTGCTTGTACTTTTCCCGCGACGAAGGGGGAGAGACAAACCTTCTG GTGGCCATGTATGTTGATGACCTGGTCATTGCTGGTCGTCGTGAGAAAGT AGACGACTTCAAGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGG GCTCTCTCTCTCGCGTGTTGGGAATAGAAGTACGGCGTGACCGCCCTAAT GGTACCATAACCATCTCGCAGGGTAGCTGCATCCGCGAGGTACTAAAAAG ATACGGTTTTGACGAGTGTCGAGGAGTACCCATCCCTGTAGGGGGAAAAG TGAAGATTTCGGCACCCGAATCGGCCGACAAGCCCTCGGAACCGAAGTCA CTTCGAGCTGTACTGTCGGACATAGGCGCAGGAGTACAAGAAAGTAGCAG AGGAAGAAGTGACAATTCAACTGAATACAGAGGCATGGTAGGATCACTCA TGTACGCCTCGACAGGAACTAGCCCTGATATA
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Coding sequence (CDS) from alignment at H-paniculata_contig57583:7..1038+

>mRNA_H-paniculata_contig57583.13330.1 ID=mRNA_H-paniculata_contig57583.13330.1|Name=mRNA_H-paniculata_contig57583.13330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1842bp|location=Sequence derived from alignment at H-paniculata_contig57583:7..1038+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCCGAAATCCGCGGCAGAAGAATTAAAGGGTCCAGAGGCGGAAAAATG
GGGGGAGGCAATGGCGGAAGAATGGGGGGCGTTGGTGAAAAATGGGACAT
GGAAAAGCGAAGACCCGGGGAGGTTACCGGCAGGGCGGAAGGCGATTCGT
ACGAAATGGATTTTCAAGGGGAAACTGAAGGAGGACGGCAACGTGGCACG
CTACAAAGCGCGACTGGTGGCTCAAGGTTTTTCACTGGCGGAGGGTGAAG
ATTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCGACGTTACGTACT
GCTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGGACGT
AGATGTGGCGTATTTGAACGCCCCGGTAGAAGAAGAGCTGTTTGTTAAGC
TTCCCCCCGAGACCCGAAATCCGCGGCAGAAGAATTAAAGGGTCCAGAGG
CGGAAAAATGGGGGGAGGCAATGGCGGAAGAATGGGGGGCGTTGGTGAAA
AATGGGACATGGAAAAGCGAAGACCCGGGGAGGTTACCGGCAGGGCGGAA
GGCGATTCGTACGAAATGGATTTTCAAGGGGAAACTGAAGGAGGACGGCA
ACGTGGCACGCTACAAAGCGCGACTGGTGGCTCAAGGTTTTTCACTGGCG
GAGGGTGAAGATTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCGAC
GTTACGTACTGCTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAG
GCATGGACGTAGATGTGGCGTATTTGAACGCCCCGGTAGAAGAAGAGCTG
TTTGTTAAGCTTCCCCCCGACCTGTACGGCCTCAAGCAGAGCGGCCGAAA
CTGGAATAACACTCTTGACGATTTTTTTGTTGGGATAGGACTCCACCGTT
CCACTACCGACTCGTGCTTGTACTTTTCCCGCGACGAAGGGGGAGAGACA
AACCTTCTGGTGGCCATGTATGTTGATGACCTGGTCATTGCTGGTCGTCG
TGAGAAAGTAGACGACTTCAAGCATAACATAAGTCAGCGTTTTAGGATGA
AAGACTTGGGCTCTCTCTCTCGCGTGTTGGGAATAGAAGTACGGCGTGAC
CGCCCTAATGGTACCATAACCATCTCGCAGGGTAGCTGCATCCGCGAGGT
ACTAAAAAGATACGGTTTTGACGAGTGTCGAGGAGTACCCATCCCTGTAG
GGGGAAAAGTGAAGATTTCGGCACCCGAATCGGCCGACAAGCCCTCGGAA
CCGAACCTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAACACTCT
TGACGATTTTTTTGTTGGGATAGGACTCCACCGTTCCACTACCGACTCGT
GCTTGTACTTTTCCCGCGACGAAGGGGGAGAGACAAACCTTCTGGTGGCC
ATGTATGTTGATGACCTGGTCATTGCTGGTCGTCGTGAGAAAGTAGACGA
CTTCAAGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCTCTC
TCTCTCGCGTGTTGGGAATAGAAGTACGGCGTGACCGCCCTAATGGTACC
ATAACCATCTCGCAGGGTAGCTGCATCCGCGAGGTACTAAAAAGATACGG
TTTTGACGAGTGTCGAGGAGTACCCATCCCTGTAGGGGGAAAAGTGAAGA
TTTCGGCACCCGAATCGGCCGACAAGCCCTCGGAACCGAAAAGTGACAAT
TCAACTGAATACAGAGGCATGGTAGGATCACTCATGTACGCCTCGACAGG
AACTAGCCCTGATATAAAGTGACAATTCAACTGAATACAGAGGCATGGTA
GGATCACTCATGTACGCCTCGACAGGAACTAGCCCTGATATA
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