prot_H-paniculata_contig5756.13324.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5756.13324.1
Unique Nameprot_H-paniculata_contig5756.13324.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length381
Homology
BLAST of mRNA_H-paniculata_contig5756.13324.1 vs. uniprot
Match: A0A6H5LJ65_9PHAE (DUF202 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ65_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 3.590e-52
Identity = 149/382 (39.01%), Postives = 183/382 (47.91%), Query Frame = 0
Query:    1 MARTRVTVVASDGKREGISWYDGATEGAVVRCARVALGLPAYGTAHLVWISGDIVDFGKPIEDGVTLYLDAVVPEDYPTTFERAP--RRGIVDTAAAAXXATTGADARNRMRIWSTPPPYPPTSADGVDGGAVSQDDDNEDIGTRSNSLSSPSQDLTEQEEQEPAVGAATGTTRQRIFSSWRQSVWQNDGPHKNSTEE-ERLPLLKASASGSTSASTDPSTEFVEDFHHHNRKKASPRFSVFTSSSSNWSNGSDRSPSEQRGRIVKIKRILAHLANERTYLAWVRAMGKMFTAGTLSLTLAGKT-SGGYSVCFVFVGLAYFGLCPYVVFLGFRRFKEAAEVMQGTVHDAYAFFMGRDLKTMNVLLSALAVLTAMIMVVQFLA 378
            MAR  VT+VASDG+REGISWYDGATE AV+RCA +ALGLP    AHL+  SGDIVD G PI DG TL+LD V     P+          G  D   ++XX                        A    GG+VS                               V    G  RQR       S +   G   +S EE ER PLL+    G   +ST                                         +QR  I+K+KRI AHLANERT LAWVRA+GKMFTAG L L+LAG   S  Y+VCFV  G+ YF + PYVVF+G +RF +AA+VM G+V+D Y+FF G  L+ +  L+  LAV+T  +M  Q  A
Sbjct:    1 MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLRQSGDIVDLGTPITDGATLHLDTVRELALPSQEAAGDVYASGGHDHGESSXXXXXXXXXXXXXXXXXXXXXXXXXLATTRCGGSVSV-----------------------------TVSGGGGDCRQR------PSTFLERG---DSDEELERRPLLRT---GRVPSSTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQRLAILKLKRINAHLANERTLLAWVRAVGKMFTAGVLCLSLAGDGYSPTYTVCFVGTGIVYFAMGPYVVFVGAKRFHQAAQVMNGSVYDTYSFFSGSHLRGLTYLMMTLAVVTVALMATQLSA 341          
BLAST of mRNA_H-paniculata_contig5756.13324.1 vs. uniprot
Match: D8LKT6_ECTSI (DUF202 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT6_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 3.820e-33
Identity = 70/126 (55.56%), Postives = 90/126 (71.43%), Query Frame = 0
Query:  254 PSEQRGRIVKIKRILAHLANERTYLAWVRAMGKMFTAGTLSLTLAGKT-SGGYSVCFVFVGLAYFGLCPYVVFLGFRRFKEAAEVMQGTVHDAYAFFMGRDLKTMNVLLSALAVLTAMIMVVQFLA 378
            P +QR  I+K+KRI AHLANERT LAWVRA+GKMFTAG L L+LA    S  Y VCFV +G+ YF + PYVVF+G +RF +AA+VM+G+VHD Y+FF G   + +  L+  LAV+T  +M  Q  A
Sbjct:   70 PEQQRLAILKLKRINAHLANERTLLAWVRAVGKMFTAGVLCLSLADDGYSPTYRVCFVGMGMVYFAMGPYVVFVGAKRFHQAAQVMKGSVHDTYSFFSGSHQRGLTYLMMTLAVVTVALMATQLSA 195          
BLAST of mRNA_H-paniculata_contig5756.13324.1 vs. uniprot
Match: D8LKT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT5_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.760e-25
Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 MARTRVTVVASDGKREGISWYDGATEGAVVRCARVALGLPAYGTAHLVWISGDIVDFGKPIEDGVTLYLDAV 72
            MAR  VT+VASDG+REGISWYDGATE AV+RCA +ALGLP    AHL+W SGDIVD G PI DG TL+LD V
Sbjct:    1 MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLWQSGDIVDLGTPITDGATLHLDTV 72          
BLAST of mRNA_H-paniculata_contig5756.13324.1 vs. uniprot
Match: A0A7S3XXC0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXC0_HETAK)

HSP 1 Score: 55.8 bits (133), Expect = 1.170e-5
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 0
Query:  262 VKIKRILAHLANERTYLAWVRAMGKMFTAGTLSLTLAGKTSGGYSVCFVFVGLAYFGL-CPYVVFLGFRRFK 332
            +K++RI AHLANERTYLAW+R+   MF+   +SL + G  SGG    F ++G  ++GL C  VV +G+ R+K
Sbjct:   52 LKLERINAHLANERTYLAWIRSALSMFSL-YISLFVTGDISGGL---FWWIG-GFYGLSCGVVVAVGYARYK 118          
BLAST of mRNA_H-paniculata_contig5756.13324.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.880e-5
Identity = 34/111 (30.63%), Postives = 57/111 (51.35%), Query Frame = 0
Query:  262 VKIKRILAHLANERTYLAWVRA----MGKMFTAGTLSLTLAGKTSGGYSVCFVFVGLAYFGLCPYVVFLGFRRFKEAAEVMQGTVHDAYAFFMGRDLKTMNVLLSALAVLT 368
            VK +R+L+HLANERT+LAW+RA    +   FT   L  ++  K     S+    +GL Y  + P  V +G+ R++    ++  +  D + +F    +     LL ++ V T
Sbjct:  104 VKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFT 214          
BLAST of mRNA_H-paniculata_contig5756.13324.1 vs. uniprot
Match: A0A7S2WHB1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHB1_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 9.330e-5
Identity = 35/115 (30.43%), Postives = 58/115 (50.43%), Query Frame = 0
Query:  258 RGRIVKIKRILAHLANERTYLAWVRA----MGKMFTAGTLSLTLAGKTSGGYSVCFVFVGLAYFGLCPYVVFLGFRRFKEAAEVMQGTVHDAYAFFMGRDLKTMNVLLSALAVLT 368
            +G+ VK++R+L+HLANERT+LAW+RA    +   FT   L   ++GK           + L Y  + P  V +G+ RF+    ++  +      +F    +     LL A+ +LT
Sbjct:  151 QGQFVKLERVLSHLANERTWLAWLRAGLTLLSTAFTLWQLYDAVSGKIHPVLRKALYGLALGYLVIIPLTVVVGWFRFERTKHILNLSSSLVRDYFGNIGVAVQATLLGAIFLLT 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5756.13324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5LJ65_9PHAE3.590e-5239.01DUF202 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LKT6_ECTSI3.820e-3355.56DUF202 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LKT5_ECTSI2.760e-2572.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XXC0_HETAK1.170e-547.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DFA2_9STRA5.880e-530.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WHB1_9STRA9.330e-530.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003807Domain of unknown function DUF202PFAMPF02656DUF202coord: 270..331
e-value: 1.3E-6
score: 28.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..328
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 329..358
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 379..380
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 359..378
NoneNo IPR availableTMHMMTMhelixcoord: 303..325
NoneNo IPR availableTMHMMTMhelixcoord: 357..379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5756contigH-paniculata_contig5756:6892..12383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5756.13324.1mRNA_H-paniculata_contig5756.13324.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5756 6801..13197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5756.13324.1 ID=prot_H-paniculata_contig5756.13324.1|Name=mRNA_H-paniculata_contig5756.13324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=381bp
MARTRVTVVASDGKREGISWYDGATEGAVVRCARVALGLPAYGTAHLVWI
SGDIVDFGKPIEDGVTLYLDAVVPEDYPTTFERAPRRGIVDTAAAAAAAT
TGADARNRMRIWSTPPPYPPTSADGVDGGAVSQDDDNEDIGTRSNSLSSP
SQDLTEQEEQEPAVGAATGTTRQRIFSSWRQSVWQNDGPHKNSTEEERLP
LLKASASGSTSASTDPSTEFVEDFHHHNRKKASPRFSVFTSSSSNWSNGS
DRSPSEQRGRIVKIKRILAHLANERTYLAWVRAMGKMFTAGTLSLTLAGK
TSGGYSVCFVFVGLAYFGLCPYVVFLGFRRFKEAAEVMQGTVHDAYAFFM
GRDLKTMNVLLSALAVLTAMIMVVQFLAGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003807DUF202