mRNA_H-paniculata_contig5702.13251.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 184 bits (467), Expect = 1.910e-47 Identity = 142/467 (30.41%), Postives = 218/467 (46.68%), Query Frame = 1
Query: 1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLG-KAWRQRWFPDVVESLYALDRGH---------------VQKVATGDSPEQPEGAVCRSIW--------------------------PMLPKV---CERTRPVHAEAGSASAGSDPLPW-----Q*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQES---QWGRRYRNPN---------PNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
R K V+ +LRELE R +EV +TP +L K GI+ + K Q +E++++ A + V +L K+ +RWFP+ ++LY + R +K+ PE P R+ + LPK+ +R R + E G + +PW Q SG F ++ L DQ+ FV GQ +W T +RV ++QP GL+K++CT + P + ++ ++G+ +S A V+ + + ++ QW R P+ P+ +++L NLHGQ T KF + Y++CN +++LLPAG TD+LQ VDA GR +K +G+ LD WLE + L +LTAS+RR+L+T W+A V+ I+A YR RL EK G MTADGS DE I EG+
Sbjct: 1337 REKLSVVEQLRELESRAQEVRAHFNLTPLGYLSNKTGIAVANISKWQREEEKLLEVAAKSVKKKLFDTKSRPKRWFPEAEQALYTMYRERRKKKVRVSTRWLTVTFRKLLAEKYPEDPRAKTFRASYRWAQKWAHRHSLSMRRKSNGKNKSSEERLPKINAWLKRYRELLREP--RRCGGELVPWPQQVPQEASGDLQAHHKWGRFLPDERLNTDQVPTGFVNGQVDSWEQTGARRVHIMQPFPGLEKRQCTVQPTFGPGGK----------VMKCAIIFRGKGTGISKVEKAAYDKRVDVFFQPKAWADDNFCMQWLERCFRPSLMAASGGKVPDAQTVLLADNLHGQTTEKFRKYLYKECNTLLWLLPAGCTDELQPVDAGMGRRMKTGMGRQLDSWLEHGDNLQQWEDGSLTASERRVLLTQWVAEVIEKINADQQYRSRLFEKTGTGMTADGSGDERINLEGV 1791
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JKG3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG3_9PHAE) HSP 1 Score: 176 bits (445), Expect = 2.850e-45 Identity = 146/471 (31.00%), Postives = 211/471 (44.80%), Query Frame = 1
Query: 1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLY---ALDRGHVQKVAT------------GDSPEQPEGAVC--------------------------RSIWPMLPKVCERTR--------PVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG----------RRYRN-------PNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
R KA + +LR L+E +V+ +TP +LE ++ ++ +L+VK DE IV +A +V LL K +RWFP+ + LY R KV+T + PE A +S+ LPK+ R PV A AS D + G P F + VDQ+ L FV G TW T RV + QP AGL+K++CT ++ P ++ + S+ ++G+ + +S A + + QE+ W R YR P +SIL M NLH Q T +F + + CN + +L PA TD++Q VDA GR +KVEVG +DKWL+Q + + +LTASDRR+LIT W A + +++ YR RL EK G+ MT DGS D+ IT EGL
Sbjct: 102 RCKAHAVTQLRLLQEDAADVFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNTFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEAS---DVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPG-----EKTMRI-----SVIFRGQGKRISPVEKAA------YHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVGNEMDKWLDQSDNIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRLFEKCGMAMTVDGSGDDRITLEGL 553
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE) HSP 1 Score: 177 bits (448), Expect = 4.450e-45 Identity = 146/471 (31.00%), Postives = 213/471 (45.22%), Query Frame = 1
Query: 1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYAL---DRGHVQKVAT------------GDSPEQPEGAVC--------------------------RSIWPMLPKVCERTR--------PVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG----------RRYRN-------PNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
R KA V+ +LR L+E +++ +TP +LE ++ ++ +L+VK DE IV +A +V LL K +RWFP+ + LY + R KV+T + PE A +S+ LPK+ R PV A AS D + G P F + VDQ+ L FV G TW T RV + QP AGL+K++CT ++ P ++ + S+ ++G+ + +S A + + QE+ W R YR P +SIL M NLH Q T +F + + CN + +L PA TD++Q VDA GR +KVEVG +DKWL+Q + + +LTASDRR+LIT W A + +++ YR RL EK G+ MT DGS D+ IT EGL
Sbjct: 284 RFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEAS---DVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPG-----EKTMRI-----SVIFRGQGKRISPVEKAA------YHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVGNEMDKWLDQSDNIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRLFEKCGMAMTVDGSGDDRITLEGL 735
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE) HSP 1 Score: 174 bits (442), Expect = 6.960e-45 Identity = 146/471 (31.00%), Postives = 212/471 (45.01%), Query Frame = 1
Query: 1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYAL---DRGHVQKVAT------------GDSPEQPEGAVC--------------------------RSIWPMLPKVCERTR--------PVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG----------RRYRN-------PNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQE------EYLTLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
R KA V+ +LR L+E +++ +TP +LE ++ ++ +L+VK DE IV +A +V LL K +RWFP+ + LY + R KV+T + PE A +S+ LPK+ R PV A AS D + G P F + VDQ+ L FV G TW T RV + QP AGL+K++CT ++ P ++ + S+ ++G+ + +S A + + QE+ W R YR P +SIL M NL+ Q T +F + + CN + +L PA TD++Q VDA GR +KVEVG +DKWL+Q E +LTASDRR+LIT W A + +++ YR RL EK G+ MT DGS D+ IT EGL
Sbjct: 170 RFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEAS---DVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPG-----EKTMRI-----SVIFRGQGKRISPVEKAA------YHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLYAQTTDEFKGYLAKQCNTIAWLGPADCTDEVQPVDAGAGRLLKVEVGNEVDKWLDQSNNIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRLFEKCGMAMTVDGSGDDRITLEGL 621
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5KZ92_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ92_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.790e-41 Identity = 139/459 (30.28%), Postives = 204/459 (44.44%), Query Frame = 1
Query: 28 LRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESL---YALDRGHVQKVAT------------GDSPEQPEGAVC--------------------------RSIWPMLPKVCERTR--------PVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRR----E*MSSSRNARG*TLQRVWRGLRRASQE--SQWGRRY--------RNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
LR L+E +++ +TP+ +LE ++ ++ +L+VK DE IV + +V LL K +RWFP+ + L + R KV T + PE A +S+ LPK+ R PV A AS D + G P F + VDQ+ L FV G TW T RV + QP AGL+K++CT ++ P + R + L +G+R E + ++ + W A Q+ +W +R R P +SIL M NLH Q T +F + + CN + +L PA TD++Q VDA GR ++VEVG +DKWL+Q + + +LTASDRR+LIT W A + +++ YR R EK G+ MT DGS D+ IT EGL
Sbjct: 139 LRLLQEDAADLFKEEQLTPRQYLEDRLKVNYSLIVKWAQDEANIVQSEADDVKKTLLAKQQPKRWFPEEEKKLCNIFLARRRRKLKVPTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEAS---DVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKT--MRILVI------LRGQGKRISPVEKAAYHKDVDVFFQENAW-----ADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAQCTDEVQPVDAGAGRFLEVEVGNEMDKWLDQSDKIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRRFEKCGMAMTVDGSGDDRITLEGL 581
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JFR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR9_9PHAE) HSP 1 Score: 152 bits (384), Expect = 4.970e-37 Identity = 128/423 (30.26%), Postives = 185/423 (43.74%), Query Frame = 1
Query: 61 WPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYA-------------------LDRGHVQKVATGDSPEQPEGAVCRSI--WPMLPKVCERTRPVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPA----------------ISS*DARSF--SVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWGRRYRNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEG 1194
W TP FLE ++ I + +VK +E E+VA A +V LL K +RWFP+ + LY R V+++ +GD A R W + +R R A SD + P F + VDQ+ L+FV G TW RV + QP GL+K++CT ++ P IS + ++ V + AW ++ M ++ + GL R E P SIL M NLH Q T +F + + CN + + P+ TD++Q VDA GR +KVE+G+ +D WLEQ + L +LTASDRR+LIT W+ A + +++ YR RL EK G+ MT DGS D+ IT EG
Sbjct: 149 WKEEQRTPLQFLEDRLKIPYSNIVKWAKNEKELVAAAADDVKQSLLAKQQPKRWFPEAEKQLYKGFVERRKRKLKVSTPWLTITFRKLVREMYSGDQRAASFRASFRWARKWAKRHNLSKRRRTNLKN--KAPDESDVSAVTMVAERESRVPKYGQFQLWERWNVDQVSLAFVNGLLDTWDKRGALRVAISQPFPGLEKRQCTMQVNFGPGEKTMRISVIFRGMGKRISPVEKAAYHEDVDVFFQENAWADQKFCMEWAKRS-------YREGLMRGRGEL----------PKAWSILIMDNLHAQTTDEFKEYLAKHCNTLAWYGPSECTDEVQPVDAGAGRFLKVEIGRQMDIWLEQSDNLERWETASLTASDRRVLITQWMRASMARLNSQQAYRYRLFEKCGIAMTVDGSGDDQITLEG 552
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JT88_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT88_9PHAE) HSP 1 Score: 150 bits (380), Expect = 1.660e-36 Identity = 134/473 (28.33%), Postives = 201/473 (42.49%), Query Frame = 1
Query: 1 RGKAGVIMELRELE-ERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYAL---------------DRGHVQKVATGDSPEQPEGAVCRSIWPMLPKVCERTRPVH------AEAGSASAGSDPLPWQ*CSGGGGEGPHLRT-----------------------------------FPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG-----------------RRYRNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYLTLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
R KA V+ ELRELE + +++W VHG++ Q FL RK GI + + D ++++A A ++ L +R D + L++L R + +K+ P+ P C + + C + H + + D LP + H R F N VDQ+ L+FV G TW T RV++ QP GL+K++CT ++ I + D + + WKG+ + + + G+ QE+ W + P +SILF NLH Q T +F F + +CN ++ LLP TD+LQ VDA YGR +KVEVG LD++L +E L +++ L+A T +DA P YR RL+EK GL MTADGS D+ ITPEG+
Sbjct: 55 RKKAAVVAELRELEADHAEKIWHVHGVSCQQFLARKTGIPQPNICRWNGDAEKLIAAAANDLIRDLFKTGRERRRSGDAEKKLHSLLLQRRKRKLRVSTAWIRVNARKLVVEMYPDDP----CAKNFSASDRWCRKFAKRHHLSKRRRTSMKKKSVEDRLPQM-------KSFHRRLRQLLQXXXXXXXXXXXXXXXXXAAIVPVESSLYGRFSLNARFNVDQVGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCT----VNCCIGAGDKLMPTAVI----FRWKGKVSVVEKAA---------YYPGVDVLFQENSWTDGPTCMAWAKSSFLRSIKEGEGVVPEEQSILFADNLHAQTTDEFKKFLHGECNTLLRLLPPKLTDELQPVDAGYGRLLKVEVGNELDEFLGHKENFCLWETNK-------LSAGATRMDARPGYRHRLLEKAGLAMTADGSLDDRITPEGV 492
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5L1Y1_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y1_9PHAE) HSP 1 Score: 150 bits (380), Expect = 4.430e-36 Identity = 130/454 (28.63%), Postives = 203/454 (44.71%), Query Frame = 1
Query: 1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYAL---DRGHVQKVAT------------GDSPEQPEGAVCRSIWPMLPKVCERTRPVHAEAGSAS--AGSDPLPWQ*CSGGGGEGPHLRTF---------PGNQHLKVDQMDLSFVC------------GQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQES---QWGRRY--------RNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
R KA + +LR LE+ ++W TP +LE ++ + + +VK DE IVA A +V LL K +RWFP+ + LY + R KV+T P A R+ + K +R + +G + L P+++ F ++ D+ D+S + GQFQ W KRV + QP GL+K++CT ++ P ++ + S+ ++G + +S A V+ ++ + +W +R R P +SIL M NLH Q T +F + ++CN + P+ TD++Q VDA GR IKVE G+ +D WLEQ + L LTASDRR+LIT W+ A + +++ +R R +K G+ MT DGS D+ IT EGL
Sbjct: 403 RFKANAVNQLRILEDNAADLWKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKMFVERRKRKLKVSTLWLTITFRKLVREMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSGEERL------------PNIQRFHRLFRKLLQEPVRYRAPDESDVSAIATVAERESRVPKYGQFQLWE--RAKRVAISQPFPGLEKRQCTMQVIFGPG-----EKTLRI-----SVIFRGTGKRISPVEKAAYHKDVDVFFQENASADQKFCMEWAKRSYREGLMRGRGELPKTRSILIMDNLHQQTTDEFKEYLAKECNTFAWCGPSECTDEVQPVDAGAGRFIKVEAGRQMDMWLEQSDNLERWETAALTASDRRVLITQWIGAAMARLNSQQAFRFRPFDKCGMAMTVDGSGDDRITLEGL 832
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5KH13_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH13_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.290e-35 Identity = 98/272 (36.03%), Postives = 137/272 (50.37%), Query Frame = 1
Query: 451 PHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG----------RRYRN-------PNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
P F + VDQ+ L FV G TW T RV V QP AGL K++CT ++ P ++ + S+ ++G+ + +S A + + QE+ W R YR P +SIL M NLH Q T +F + + CN + +L PA TD++Q VDA GR +KVEVG +DKWL+Q + + +LTASDRR+LIT W A + +++ YR RL EK G+ MT DGS D+ IT EGL
Sbjct: 136 PKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAVSQPFAGLGKRKCTMQVIFGPG-----EKTMRI-----SVIFRGQGKRISPVEKAA------YHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVGNEMDKWLDQSDNIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRLFEKCGMAMTVDGSGDDRITLEGL 391
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5KIH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH7_9PHAE) HSP 1 Score: 142 bits (358), Expect = 1.370e-35 Identity = 98/257 (38.13%), Postives = 121/257 (47.08%), Query Frame = 1
Query: 445 EGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWGRRYRNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYLTL------TASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
E P F N VDQ+ L+FV G TW T RV++VQP GL+K++CT VG S+ R A SILF NLHGQ T +F F + +CN ++ LLP TD+LQ VDA YGR +KVE G LD++L EE L L +A RRIL T ++A V +DA P YR RL EK GL MTADGS D+ ITPEG+
Sbjct: 83 ESPLYGRFSLNARFNVDQVGLAFVNGLDSTWDETGALRVQIVQPFPGLEKRQCTVNC--------------CVGAGDDSM------------RTA---------------------------------SILFADNLHGQTTGEFKKFLHGECNTLLRLLPPKLTDELQPVDAGYGRLLKVEDGNELDEFLGHEENLCLWETNKLSAGARRILFTRFIARAVARMDARPGYRHRLFEKTGLAMTADGSLDDRITPEGV 280 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5702.13251.1 >prot_H-paniculata_contig5702.13251.1 ID=prot_H-paniculata_contig5702.13251.1|Name=mRNA_H-paniculata_contig5702.13251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp MYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVback to top mRNA from alignment at H-paniculata_contig5702:11535..12752+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5702.13251.1 ID=mRNA_H-paniculata_contig5702.13251.1|Name=mRNA_H-paniculata_contig5702.13251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig5702:11535..12752+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5702:11535..12752+ >mRNA_H-paniculata_contig5702.13251.1 ID=mRNA_H-paniculata_contig5702.13251.1|Name=mRNA_H-paniculata_contig5702.13251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at H-paniculata_contig5702:11535..12752+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |