mRNA_H-paniculata_contig5702.13251.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5702.13251.1
Unique NamemRNA_H-paniculata_contig5702.13251.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.910e-47
Identity = 142/467 (30.41%), Postives = 218/467 (46.68%), Query Frame = 1
Query:    1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLG-KAWRQRWFPDVVESLYALDRGH---------------VQKVATGDSPEQPEGAVCRSIW--------------------------PMLPKV---CERTRPVHAEAGSASAGSDPLPW-----Q*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQES---QWGRRYRNPN---------PNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            R K  V+ +LRELE R +EV     +TP  +L  K GI+   + K Q +E++++  A + V  +L   K+  +RWFP+  ++LY + R                  +K+     PE P     R+ +                            LPK+    +R R +  E      G + +PW     Q  SG          F  ++ L  DQ+   FV GQ  +W  T  +RV ++QP  GL+K++CT +    P             +   ++ ++G+   +S    A       V+   +  + ++   QW  R   P+         P+ +++L   NLHGQ T KF  + Y++CN +++LLPAG TD+LQ VDA  GR +K  +G+ LD WLE  + L      +LTAS+RR+L+T W+A V+  I+A   YR RL EK G  MTADGS DE I  EG+
Sbjct: 1337 REKLSVVEQLRELESRAQEVRAHFNLTPLGYLSNKTGIAVANISKWQREEEKLLEVAAKSVKKKLFDTKSRPKRWFPEAEQALYTMYRERRKKKVRVSTRWLTVTFRKLLAEKYPEDPRAKTFRASYRWAQKWAHRHSLSMRRKSNGKNKSSEERLPKINAWLKRYRELLREP--RRCGGELVPWPQQVPQEASGDLQAHHKWGRFLPDERLNTDQVPTGFVNGQVDSWEQTGARRVHIMQPFPGLEKRQCTVQPTFGPGGK----------VMKCAIIFRGKGTGISKVEKAAYDKRVDVFFQPKAWADDNFCMQWLERCFRPSLMAASGGKVPDAQTVLLADNLHGQTTEKFRKYLYKECNTLLWLLPAGCTDELQPVDAGMGRRMKTGMGRQLDSWLEHGDNLQQWEDGSLTASERRVLLTQWVAEVIEKINADQQYRSRLFEKTGTGMTADGSGDERINLEGV 1791          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JKG3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG3_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 2.850e-45
Identity = 146/471 (31.00%), Postives = 211/471 (44.80%), Query Frame = 1
Query:    1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLY---ALDRGHVQKVAT------------GDSPEQPEGAVC--------------------------RSIWPMLPKVCERTR--------PVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG----------RRYRN-------PNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            R KA  + +LR L+E   +V+    +TP  +LE ++ ++ +L+VK   DE  IV +A  +V   LL K   +RWFP+  + LY      R    KV+T             + PE    A                            +S+   LPK+    R        PV   A  AS   D       + G    P    F   +   VDQ+ L FV G   TW  T   RV + QP AGL+K++CT ++   P       ++  +     S+ ++G+ + +S    A         + +    QE+ W           R YR          P  +SIL M NLH Q T +F  +  + CN + +L PA  TD++Q VDA  GR +KVEVG  +DKWL+Q + +      +LTASDRR+LIT W  A +  +++   YR RL EK G+ MT DGS D+ IT EGL
Sbjct:  102 RCKAHAVTQLRLLQEDAADVFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNTFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEAS---DVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPG-----EKTMRI-----SVIFRGQGKRISPVEKAA------YHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVGNEMDKWLDQSDNIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRLFEKCGMAMTVDGSGDDRITLEGL 553          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 4.450e-45
Identity = 146/471 (31.00%), Postives = 213/471 (45.22%), Query Frame = 1
Query:    1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYAL---DRGHVQKVAT------------GDSPEQPEGAVC--------------------------RSIWPMLPKVCERTR--------PVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG----------RRYRN-------PNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            R KA V+ +LR L+E   +++    +TP  +LE ++ ++ +L+VK   DE  IV +A  +V   LL K   +RWFP+  + LY +    R    KV+T             + PE    A                            +S+   LPK+    R        PV   A  AS   D       + G    P    F   +   VDQ+ L FV G   TW  T   RV + QP AGL+K++CT ++   P       ++  +     S+ ++G+ + +S    A         + +    QE+ W           R YR          P  +SIL M NLH Q T +F  +  + CN + +L PA  TD++Q VDA  GR +KVEVG  +DKWL+Q + +      +LTASDRR+LIT W  A +  +++   YR RL EK G+ MT DGS D+ IT EGL
Sbjct:  284 RFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEAS---DVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPG-----EKTMRI-----SVIFRGQGKRISPVEKAA------YHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVGNEMDKWLDQSDNIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRLFEKCGMAMTVDGSGDDRITLEGL 735          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 6.960e-45
Identity = 146/471 (31.00%), Postives = 212/471 (45.01%), Query Frame = 1
Query:    1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYAL---DRGHVQKVAT------------GDSPEQPEGAVC--------------------------RSIWPMLPKVCERTR--------PVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG----------RRYRN-------PNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQE------EYLTLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            R KA V+ +LR L+E   +++    +TP  +LE ++ ++ +L+VK   DE  IV +A  +V   LL K   +RWFP+  + LY +    R    KV+T             + PE    A                            +S+   LPK+    R        PV   A  AS   D       + G    P    F   +   VDQ+ L FV G   TW  T   RV + QP AGL+K++CT ++   P       ++  +     S+ ++G+ + +S    A         + +    QE+ W           R YR          P  +SIL M NL+ Q T +F  +  + CN + +L PA  TD++Q VDA  GR +KVEVG  +DKWL+Q       E  +LTASDRR+LIT W  A +  +++   YR RL EK G+ MT DGS D+ IT EGL
Sbjct:  170 RFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEAS---DVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPG-----EKTMRI-----SVIFRGQGKRISPVEKAA------YHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLYAQTTDEFKGYLAKQCNTIAWLGPADCTDEVQPVDAGAGRLLKVEVGNEVDKWLDQSNNIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRLFEKCGMAMTVDGSGDDRITLEGL 621          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5KZ92_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ92_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.790e-41
Identity = 139/459 (30.28%), Postives = 204/459 (44.44%), Query Frame = 1
Query:   28 LRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESL---YALDRGHVQKVAT------------GDSPEQPEGAVC--------------------------RSIWPMLPKVCERTR--------PVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRR----E*MSSSRNARG*TLQRVWRGLRRASQE--SQWGRRY--------RNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            LR L+E   +++    +TP+ +LE ++ ++ +L+VK   DE  IV +   +V   LL K   +RWFP+  + L   +   R    KV T             + PE    A                            +S+   LPK+    R        PV   A  AS   D       + G    P    F   +   VDQ+ L FV G   TW  T   RV + QP AGL+K++CT ++   P   +   R   +      L  +G+R    E  +  ++      +  W     A Q+   +W +R         R   P  +SIL M NLH Q T +F  +  + CN + +L PA  TD++Q VDA  GR ++VEVG  +DKWL+Q + +      +LTASDRR+LIT W  A +  +++   YR R  EK G+ MT DGS D+ IT EGL
Sbjct:  139 LRLLQEDAADLFKEEQLTPRQYLEDRLKVNYSLIVKWAQDEANIVQSEADDVKKTLLAKQQPKRWFPEEEKKLCNIFLARRRRKLKVPTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEAS---DVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKT--MRILVI------LRGQGKRISPVEKAAYHKDVDVFFQENAW-----ADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAQCTDEVQPVDAGAGRFLEVEVGNEMDKWLDQSDKIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRRFEKCGMAMTVDGSGDDRITLEGL 581          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JFR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR9_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 4.970e-37
Identity = 128/423 (30.26%), Postives = 185/423 (43.74%), Query Frame = 1
Query:   61 WPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYA-------------------LDRGHVQKVATGDSPEQPEGAVCRSI--WPMLPKVCERTRPVHAEAGSASAGSDPLPWQ*CSGGGGEGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPA----------------ISS*DARSF--SVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWGRRYRNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEG 1194
            W     TP  FLE ++ I  + +VK   +E E+VA A  +V   LL K   +RWFP+  + LY                      R  V+++ +GD       A  R    W     + +R R        A   SD       +      P    F   +   VDQ+ L+FV G   TW      RV + QP  GL+K++CT ++   P                 IS  +  ++   V +     AW  ++  M  ++ +          GL R   E           P   SIL M NLH Q T +F  +  + CN + +  P+  TD++Q VDA  GR +KVE+G+ +D WLEQ + L      +LTASDRR+LIT W+ A +  +++   YR RL EK G+ MT DGS D+ IT EG
Sbjct:  149 WKEEQRTPLQFLEDRLKIPYSNIVKWAKNEKELVAAAADDVKQSLLAKQQPKRWFPEAEKQLYKGFVERRKRKLKVSTPWLTITFRKLVREMYSGDQRAASFRASFRWARKWAKRHNLSKRRRTNLKN--KAPDESDVSAVTMVAERESRVPKYGQFQLWERWNVDQVSLAFVNGLLDTWDKRGALRVAISQPFPGLEKRQCTMQVNFGPGEKTMRISVIFRGMGKRISPVEKAAYHEDVDVFFQENAWADQKFCMEWAKRS-------YREGLMRGRGEL----------PKAWSILIMDNLHAQTTDEFKEYLAKHCNTLAWYGPSECTDEVQPVDAGAGRFLKVEIGRQMDIWLEQSDNLERWETASLTASDRRVLITQWMRASMARLNSQQAYRYRLFEKCGIAMTVDGSGDDQITLEG 552          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5JT88_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT88_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.660e-36
Identity = 134/473 (28.33%), Postives = 201/473 (42.49%), Query Frame = 1
Query:    1 RGKAGVIMELRELE-ERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYAL---------------DRGHVQKVATGDSPEQPEGAVCRSIWPMLPKVCERTRPVH------AEAGSASAGSDPLPWQ*CSGGGGEGPHLRT-----------------------------------FPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG-----------------RRYRNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYLTLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            R KA V+ ELRELE +  +++W VHG++ Q FL RK GI    + +   D ++++A A  ++   L      +R   D  + L++L                R + +K+     P+ P    C   +    + C +    H        +    +  D LP         +  H R                                    F  N    VDQ+ L+FV G   TW  T   RV++ QP  GL+K++CT    ++  I + D    +  +      WKG+   +  +           + G+    QE+ W                  +      P  +SILF  NLH Q T +F  F + +CN ++ LLP   TD+LQ VDA YGR +KVEVG  LD++L  +E   L  +++       L+A  T +DA P YR RL+EK GL MTADGS D+ ITPEG+
Sbjct:   55 RKKAAVVAELRELEADHAEKIWHVHGVSCQQFLARKTGIPQPNICRWNGDAEKLIAAAANDLIRDLFKTGRERRRSGDAEKKLHSLLLQRRKRKLRVSTAWIRVNARKLVVEMYPDDP----CAKNFSASDRWCRKFAKRHHLSKRRRTSMKKKSVEDRLPQM-------KSFHRRLRQLLQXXXXXXXXXXXXXXXXXAAIVPVESSLYGRFSLNARFNVDQVGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCT----VNCCIGAGDKLMPTAVI----FRWKGKVSVVEKAA---------YYPGVDVLFQENSWTDGPTCMAWAKSSFLRSIKEGEGVVPEEQSILFADNLHAQTTDEFKKFLHGECNTLLRLLPPKLTDELQPVDAGYGRLLKVEVGNELDEFLGHKENFCLWETNK-------LSAGATRMDARPGYRHRLLEKAGLAMTADGSLDDRITPEGV 492          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5L1Y1_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y1_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 4.430e-36
Identity = 130/454 (28.63%), Postives = 203/454 (44.71%), Query Frame = 1
Query:    1 RGKAGVIMELRELEERRKEVWPVHGMTPQHFLERKMGISNTLMVKLQSDEDEIVANA*REVTARLLGKAWRQRWFPDVVESLYAL---DRGHVQKVAT------------GDSPEQPEGAVCRSIWPMLPKVCERTRPVHAEAGSAS--AGSDPLPWQ*CSGGGGEGPHLRTF---------PGNQHLKVDQMDLSFVC------------GQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQES---QWGRRY--------RNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            R KA  + +LR LE+   ++W     TP  +LE ++ +  + +VK   DE  IVA A  +V   LL K   +RWFP+  + LY +    R    KV+T               P     A  R+ +    K  +R         +    +G + L            P+++ F            ++   D+ D+S +             GQFQ W     KRV + QP  GL+K++CT ++   P       ++  +     S+ ++G  + +S    A       V+     ++ +    +W +R         R   P  +SIL M NLH Q T +F  +  ++CN   +  P+  TD++Q VDA  GR IKVE G+ +D WLEQ + L       LTASDRR+LIT W+ A +  +++   +R R  +K G+ MT DGS D+ IT EGL
Sbjct:  403 RFKANAVNQLRILEDNAADLWKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKMFVERRKRKLKVSTLWLTITFRKLVREMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSGEERL------------PNIQRFHRLFRKLLQEPVRYRAPDESDVSAIATVAERESRVPKYGQFQLWE--RAKRVAISQPFPGLEKRQCTMQVIFGPG-----EKTLRI-----SVIFRGTGKRISPVEKAAYHKDVDVFFQENASADQKFCMEWAKRSYREGLMRGRGELPKTRSILIMDNLHQQTTDEFKEYLAKECNTFAWCGPSECTDEVQPVDAGAGRFIKVEAGRQMDMWLEQSDNLERWETAALTASDRRVLITQWIGAAMARLNSQQAFRFRPFDKCGMAMTVDGSGDDRITLEGL 832          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5KH13_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH13_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.290e-35
Identity = 98/272 (36.03%), Postives = 137/272 (50.37%), Query Frame = 1
Query:  451 PHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWG----------RRYRN-------PNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYL------TLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            P    F   +   VDQ+ L FV G   TW  T   RV V QP AGL K++CT ++   P       ++  +     S+ ++G+ + +S    A         + +    QE+ W           R YR          P  +SIL M NLH Q T +F  +  + CN + +L PA  TD++Q VDA  GR +KVEVG  +DKWL+Q + +      +LTASDRR+LIT W  A +  +++   YR RL EK G+ MT DGS D+ IT EGL
Sbjct:  136 PKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAVSQPFAGLGKRKCTMQVIFGPG-----EKTMRI-----SVIFRGQGKRISPVEKAA------YHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVGNEMDKWLDQSDNIERWETASLTASDRRVLITQWTGAAMAKLNSNQGYRHRLFEKCGMAMTVDGSGDDRITLEGL 391          
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Match: A0A6H5KIH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH7_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.370e-35
Identity = 98/257 (38.13%), Postives = 121/257 (47.08%), Query Frame = 1
Query:  445 EGPHLRTFPGNQHLKVDQMDLSFVCGQFQTWAPTSVKRVRVVQPSAGLQKQECTFRLFLDPAISS*DARSFSVGLASASLAWKGRRE*MSSSRNARG*TLQRVWRGLRRASQESQWGRRYRNPNPNPKSILFMYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEVGKGLDKWLEQEEYLTL------TASDRRILITTWLAAVVTHIDAFPNYRCRLVEKIGLIMTADGSRDEHITPEGL 1197
            E P    F  N    VDQ+ L+FV G   TW  T   RV++VQP  GL+K++CT                  VG    S+            R A                                 SILF  NLHGQ T +F  F + +CN ++ LLP   TD+LQ VDA YGR +KVE G  LD++L  EE L L      +A  RRIL T ++A  V  +DA P YR RL EK GL MTADGS D+ ITPEG+
Sbjct:   83 ESPLYGRFSLNARFNVDQVGLAFVNGLDSTWDETGALRVQIVQPFPGLEKRQCTVNC--------------CVGAGDDSM------------RTA---------------------------------SILFADNLHGQTTGEFKKFLHGECNTLLRLLPPKLTDELQPVDAGYGRLLKVEDGNELDEFLGHEENLCLWETNKLSAGARRILFTRFIARAVARMDARPGYRHRLFEKTGLAMTADGSLDDRITPEGV 280          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5702.13251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE1.910e-4730.41Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JKG3_9PHAE2.850e-4531.00DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JFX9_9PHAE4.450e-4531.00C2H2-type domain-containing protein n=15 Tax=Ectoc... [more]
A0A6H5KDV1_9PHAE6.960e-4531.00C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KZ92_9PHAE1.790e-4130.28DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JFR9_9PHAE4.970e-3730.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT88_9PHAE1.660e-3628.33HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5L1Y1_9PHAE4.430e-3628.63HTH CENPB-type domain-containing protein n=2 Tax=E... [more]
A0A6H5KH13_9PHAE1.290e-3536.03DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KIH7_9PHAE1.370e-3538.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5702contigH-paniculata_contig5702:11535..12752 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.9
Seed ortholog evalue1.3e-23
Seed eggNOG ortholog2880.D7FI08
Hectar predicted targeting categoryother localisation
EggNOG OGs2DCSR@1,2S5KN@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1200
Cds size360
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5702.13251.1prot_H-paniculata_contig5702.13251.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5702 12375..12752 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930612.0577736-UTR-H-paniculata_contig5702:11534..123741622930612.0577736-UTR-H-paniculata_contig5702:11534..12374Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5702 11535..12374 +
1691481372.1106277-UTR-H-paniculata_contig5702:11534..123741691481372.1106277-UTR-H-paniculata_contig5702:11534..12374Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5702 11535..12374 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930612.0778048-CDS-H-paniculata_contig5702:12374..125651622930612.0778048-CDS-H-paniculata_contig5702:12374..12565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5702 12375..12565 +
1691481372.1230462-CDS-H-paniculata_contig5702:12374..125651691481372.1230462-CDS-H-paniculata_contig5702:12374..12565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5702 12375..12565 +
1622930612.0943651-CDS-H-paniculata_contig5702:12583..127521622930612.0943651-CDS-H-paniculata_contig5702:12583..12752Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5702 12584..12752 +
1691481372.1323442-CDS-H-paniculata_contig5702:12583..127521691481372.1323442-CDS-H-paniculata_contig5702:12583..12752Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5702 12584..12752 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5702.13251.1

>prot_H-paniculata_contig5702.13251.1 ID=prot_H-paniculata_contig5702.13251.1|Name=mRNA_H-paniculata_contig5702.13251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
MYNLHGQMTPKFNIFHYEDCNPMMYLLPAGYTDDLQSVDASYGRSIKVEV
GKGLDKWLEQEEYLTLTASDRRILITTWLAAVVTHIDAFPNYRCRLVEKI
GLIMTADGSRDEHITPEGL*
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mRNA from alignment at H-paniculata_contig5702:11535..12752+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5702.13251.1 ID=mRNA_H-paniculata_contig5702.13251.1|Name=mRNA_H-paniculata_contig5702.13251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig5702:11535..12752+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGGAAAGGCAGGGGTTATCATGGAATTGCGAGAGCTGGAGGAAAGGCG GAAGGAGGTCTGGCCTGTTCACGGTATGACACCTCAACACTTCCTGGAAA GGAAGATGGGAATTTCCAATACCCTCATGGTCAAGTTGCAAAGTGACGAG GACGAGATAGTCGCGAACGCATAGAGGGAAGTGACGGCGCGCCTTTTGGG CAAGGCGTGGCGGCAGCGATGGTTTCCAGATGTGGTCGAAAGTTTGTACG CGCTAGATCGGGGTCACGTGCAGAAGGTTGCTACAGGAGATTCACCCGAA CAACCCGAGGGCGCAGTCTGTCGCAGCATCTGGCCGATGCTGCCGAAAGT TTGCGAAAGGACACGACCTGTCCATGCGGAGGCTGGGTCGGCTAGTGCAG GATCCGACCCGTTGCCGTGGCAGTAGTGCAGCGGAGGTGGCGGAGAGGGA CCCCATCTTCGAACGTTTCCAGGAAACCAGCATCTCAAAGTCGACCAGAT GGACCTCTCCTTCGTGTGTGGCCAGTTTCAAACGTGGGCCCCAACCAGTG TCAAGCGCGTACGGGTTGTCCAACCCTCGGCGGGCCTGCAAAAGCAGGAG TGCACTTTCAGGCTATTTTTGGACCCGGCAATAAGCTCATGAGATGCTCG ATCATTTTCCGTGGGATTGGCAAGCGCATCTCTTGCTTGGAAAGGGCGGC GCGAGTAGATGTCTTCTTCCAGGAATGCGCGTGGGTAGACTCTCCAACGC GTTTGGCGTGGACTGAGAAGAGCTTCTCAAGAGTCTCAATGGGGAAGAAG GTATCGTAACCCTAACCCTAACCCTAAGTCGATCCTGTTCATGTATAACT TACACGGGCAGATGACGCCTAAATTCAATATATTCCACTACGAGGACTGC AACCCGATGATGTATCTCCTTCCCGCAGGGTATACGGACGACCTTCAGTC GGTGGATGCAAGTTACGGACGCTCAATCAAAGTCGAGGTTGGAAAGGGGC TAGACAAATGGCTGGAGCAAGAGGAATACCTGTAGAGGTAGGAATGCAGC ACATTGACCGCGTCTGATCGGCGTATTTTGATCACGACATGGCTAGCAGC CGTTGTCACACACATTGACGCTTTCCCCAACTACCGCTGCCGCCTGGTTG AGAAGATAGGGTTGATTATGACGGCAGACGGATCGAGAGACGAGCATATC ACTCCGGAGGGCCTTTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig5702:11535..12752+

>mRNA_H-paniculata_contig5702.13251.1 ID=mRNA_H-paniculata_contig5702.13251.1|Name=mRNA_H-paniculata_contig5702.13251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at H-paniculata_contig5702:11535..12752+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATAACTTACACGGGCAGATGACGCCTAAATTCAATATATTCCACTA
CGAGGACTGCAACCCGATGATGTATCTCCTTCCCGCAGGGTATACGGACG
ACCTTCAGTCGGTGGATGCAAGTTACGGACGCTCAATCAAAGTCGAGGTT
GGAAAGGGGCTAGACAAATGGCTGGAGCAAGAGGAATACCTATGTATAAC
TTACACGGGCAGATGACGCCTAAATTCAATATATTCCACTACGAGGACTG
CAACCCGATGATGTATCTCCTTCCCGCAGGGTATACGGACGACCTTCAGT
CGGTGGATGCAAGTTACGGACGCTCAATCAAAGTCGAGGTTGGAAAGGGG
CTAGACAAATGGCTGGAGCAAGAGGAATACCTCACATTGACCGCGTCTGA
TCGGCGTATTTTGATCACGACATGGCTAGCAGCCGTTGTCACACACATTG
ACGCTTTCCCCAACTACCGCTGCCGCCTGGTTGAGAAGATAGGGTTGATT
ATGACGGCAGACGGATCGAGAGACGAGCATATCACTCCGGAGGGCCTTTA
GCACATTGACCGCGTCTGATCGGCGTATTTTGATCACGACATGGCTAGCA
GCCGTTGTCACACACATTGACGCTTTCCCCAACTACCGCTGCCGCCTGGT
TGAGAAGATAGGGTTGATTATGACGGCAGACGGATCGAGAGACGAGCATA
TCACTCCGGAGGGCCTTTAG
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