prot_H-paniculata_contig5660.13194.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5660.13194.1
Unique Nameprot_H-paniculata_contig5660.13194.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length250
Homology
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A6H5KSL7_9PHAE (NifU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL7_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 2.130e-75
Identity = 146/228 (64.04%), Postives = 162/228 (71.05%), Query Frame = 0
Query:   28 AAMAFQASPVGSFAPPYLFIIPATAGTQHCRSCSSASTVTTTPASTTAFSSLHRPW----ARSINVAARGVGGDTSRTWGRALRMSSTDIESPFASPGVVETEE-DDKDAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            AA++ Q S  G+FAPP    +PA  G  HCRSCSS                         AR    A R  G   S    R  RMSSTDIESPFASPG+ +  + +D DA L LTLENVE VLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRL+Q+IPEISEVVQSIPNGPEL  E +EKVLDGVRPFLSVAGG+I ++SL G++SIQ
Sbjct:   15 AAISLQNSRAGAFAPPAF--VPA--GPAHCRSCSSXXXXXXXXXXXXXXXXXXXXXXXQQARGWGSAPRRNGASESAVAPR--RMSSTDIESPFASPGMADMGDGEDADALLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLMQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQ 236          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A835Z016_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z016_9STRA)

HSP 1 Score: 211 bits (538), Expect = 7.330e-66
Identity = 110/138 (79.71%), Postives = 120/138 (86.96%), Query Frame = 0
Query:  113 IESPFASPGVVETEEDDKDAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            IESPFA  G V   +D    PLPLTLENVE+VLDEMRPYLMSDGGNVRVVEIDGPVVRLEL+GACGSCPSSTMTMKMGLERRL++KIPEISEVVQS+P GP+LN EEIEKVLDGVRPFLSVAGG I V +L G+  +Q
Sbjct:    7 IESPFAGGGGVAGGDD---GPLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELQGACGSCPSSTMTMKMGLERRLIEKIPEISEVVQSMPEGPQLNMEEIEKVLDGVRPFLSVAGGAISVAALEGVGGMQ 141          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A7R9U202_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U202_9STRA)

HSP 1 Score: 191 bits (484), Expect = 6.040e-57
Identity = 100/157 (63.69%), Postives = 121/157 (77.07%), Query Frame = 0
Query:   96 GDTSRT--WGRALRMSSTDIESPFASPGVVETEEDDKDAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            G  SRT  W    +  S D+ESPF S     T  D+    LPLTL+NVE+VLDEMRPYLMSDGGNV V EIDGP+VRLEL+GACG+CPSSTMTMKMGLERRL ++IPEISEVVQ++P+ PEL+E  +E VLDGVRPFL VAGG+I ++ + G+  +Q
Sbjct:   53 GGLSRTVQWRLQAQQESIDVESPFQSG--TPTARDNSH--LPLTLDNVELVLDEMRPYLMSDGGNVAVAEIDGPIVRLELQGACGTCPSSTMTMKMGLERRLKERIPEISEVVQAVPDAPELSEAGVESVLDGVRPFLQVAGGSITLQEISGVGGLQ 205          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: W7TNI1_9STRA (Nifu like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNI1_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.730e-56
Identity = 104/155 (67.10%), Postives = 123/155 (79.35%), Query Frame = 0
Query:   97 DTSRTWGRALRMSSTD-IESPFASPGVVETEEDDKDAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            D S T    L  +STD I SPF S GV +   DD   PLPLTLENVE+VLDEMRPYLMSDGGNV V +IDGPVV+LEL+GACGSCPSSTMTMKMGLERRL +KIPEISEV+Q++P GP L+ E I++VL+GVRPFL VAGG+I V+ + G+  +Q
Sbjct:   54 DASSTLVVPLSRTSTDTITSPFES-GVKQGGGDD--GPLPLTLENVEMVLDEMRPYLMSDGGNVVVSDIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQ 205          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A4D9D2Y8_9STRA (NifU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2Y8_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.990e-56
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 0
Query:  106 LRMSSTD-IESPFASPGVVETEEDDKDAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            L  +STD I SPF S GV +   DD   PLPLTLENVE+VLDEMRPYLMSDGGNV V EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL +KIPEISEV+Q++P GP L+ E I++VL+GVRPFL VAGG+I V+ + G+  +Q
Sbjct:   66 LSSTSTDTITSPFES-GVKQDGGDD--GPLPLTLENVEMVLDEMRPYLMSDGGNVVVSEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQ 208          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A7S1H4I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4I0_9STRA)

HSP 1 Score: 181 bits (459), Expect = 5.260e-54
Identity = 97/141 (68.79%), Postives = 110/141 (78.01%), Query Frame = 0
Query:  113 IESPFASPGVVETEEDD---KDAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            I SPF S     T  D     D PL LT +NVE+VL+EMRPYL+SDGGNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER+L +KIPEI EVVQS+P GPEL EEEI  VLDGVRPFL VAGG+I VES+ G N +Q
Sbjct:    3 IISPFDSSSPAYTPTDPVELDDGPLELTWDNVELVLEEMRPYLISDGGNVAISEIDGPVVRLELQGACGTCPSSTQTMKMGLERKLREKIPEIQEVVQSMPEGPELCEEEINVVLDGVRPFLQVAGGSIDVESISGENGLQ 143          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A7S2C848_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C848_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.190e-51
Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 0
Query:   76 FSSLHRPWARSINVAARGVGGDTSRTWGRALRMSSTDIESPFASPGVVETEEDDKD-----------------APLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
             +S    W      A+ G+    +  +GR +     ++ SPF    + + E+DD D                  PL L  +NV+++LDEMRPYL+SDGGNV + EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL + IPEISEVVQ++P+ P L EE ++ +L+G+RPFL VAGG I +ESL G++SIQ
Sbjct:   15 LASAAEAWLARPVAASWGLSRPHAGPFGRGIHRVYGEVTSPFEQ-RLEDMEDDDGDEEEGDFEGMVGGASQIEGPLDLNWDNVDLILDEMRPYLISDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEAIPEISEVVQAMPDSPPLTEESVDGILEGIRPFLQVAGGKIEIESLTGVDSIQ 205          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A7S0HPD5_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HPD5_9CRYP)

HSP 1 Score: 175 bits (443), Expect = 8.760e-51
Identity = 110/194 (56.70%), Postives = 133/194 (68.56%), Query Frame = 0
Query:   66 VTTTPASTTAFSSLHRPWARSINVAARGVGGDTSRTWGRALRMSSTD-IESPFASPGV-----VETEED--DKDAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNG-PELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            +T + A+T +FS L RP   S+  A R +           L +  TD I SPF  P V      E+EE   D D PLPLTLENVE VLD MRPYLMSDGGNV+V +IDG +VRL+LEGACG+CPSSTMTMKMGLER L +KIPEI +VVQ + +G PEL+ + +EKVLD VRPFL VAGGTI +  LRG+  +Q
Sbjct:   24 LTVSQAATPSFSKLWRP--PSLRSAKRSL-----------LLLKDTDSIVSPF-DPSVDPLLPKESEESTADLDGPLPLTLENVEKVLDTMRPYLMSDGGNVKVADIDGGIVRLKLEGACGTCPSSTMTMKMGLERGLREKIPEIVDVVQDLGDGGPELSPDAVEKVLDTVRPFLKVAGGTIELSDLRGVGGMQ 203          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A7S2E835_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E835_TRICV)

HSP 1 Score: 175 bits (444), Expect = 1.140e-50
Identity = 87/120 (72.50%), Postives = 100/120 (83.33%), Query Frame = 0
Query:  131 DAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            DAPL LT ENVE VLDEMRP+L+ DGGNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER L ++IPEI EVVQS+P GP L  E+++ VLDGVRPFL VAGGTI  ES+RG  S+Q
Sbjct:  106 DAPLELTYENVESVLDEMRPFLIQDGGNVAITEIDGPVVRLELQGACGTCPSSTQTMKMGLERGLRERIPEIQEVVQSLPEGPPLEVEQVDVVLDGVRPFLQVAGGTIDCESIRGEGSVQ 225          
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Match: A0A7S1D6Z8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6Z8_CYCTE)

HSP 1 Score: 173 bits (439), Expect = 3.500e-50
Identity = 83/120 (69.17%), Postives = 102/120 (85.00%), Query Frame = 0
Query:  131 DAPLPLTLENVEIVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIPEISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ 250
            + PL LT ENVE+VLDEMRPYL+ DGGNV++ EIDGPVVRL+LEGACG+CPSST TMKMGLERRL ++IPEI EV+Q++P GP+L ++E+  VLDGVRPFL VAGGTI +  + GI S+Q
Sbjct:   85 EGPLDLTEENVELVLDEMRPYLIQDGGNVKIQEIDGPVVRLQLEGACGTCPSSTQTMKMGLERRLRERIPEIQEVIQAMPQGPDLCDDEVNVVLDGVRPFLQVAGGTIDIVVIEGIGSLQ 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5660.13194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL7_9PHAE2.130e-7564.04NifU domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z016_9STRA7.330e-6679.71NifU-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7R9U202_9STRA6.040e-5763.69Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TNI1_9STRA2.730e-5667.10Nifu like protein n=1 Tax=Nannochloropsis gaditana... [more]
A0A4D9D2Y8_9STRA2.990e-5669.86NifU domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S1H4I0_9STRA5.260e-5468.79Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2C848_9STRA3.190e-5149.48Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0HPD5_9CRYP8.760e-5156.70Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S2E835_TRICV1.140e-5072.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1D6Z8_CYCTE3.500e-5069.17Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 141..206
e-value: 1.5E-24
score: 85.9
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 214..250
e-value: 2.2E-7
score: 32.6
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 134..211
e-value: 3.1E-30
score: 105.8
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 138..209
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 62..236
NoneNo IPR availablePANTHERPTHR11178:SF39NIFU-LIKE PROTEIN 2, CHLOROPLASTICcoord: 62..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePRODOMPD002830coord: 145..207
e-value: 8.0E-23
score: 265.0
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5660contigH-paniculata_contig5660:134..6213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5660.13194.1mRNA_H-paniculata_contig5660.13194.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5660 134..6626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5660.13194.1 ID=prot_H-paniculata_contig5660.13194.1|Name=mRNA_H-paniculata_contig5660.13194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
MKVASNSKNAGTFTAASAAAAAASFCTAAMAFQASPVGSFAPPYLFIIPA
TAGTQHCRSCSSASTVTTTPASTTAFSSLHRPWARSINVAARGVGGDTSR
TWGRALRMSSTDIESPFASPGVVETEEDDKDAPLPLTLENVEIVLDEMRP
YLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQKIP
EISEVVQSIPNGPELNEEEIEKVLDGVRPFLSVAGGTIRVESLRGINSIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001075NIF_FeS_clus_asmbl_NifU_C
IPR034904FSCA_dom_sf