prot_H-paniculata_contig565.13179.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig565.13179.1
Unique Nameprot_H-paniculata_contig565.13179.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length618
Homology
BLAST of mRNA_H-paniculata_contig565.13179.1 vs. uniprot
Match: A0A6H5KLQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ0_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 2.580e-108
Identity = 212/356 (59.55%), Postives = 245/356 (68.82%), Query Frame = 0
Query:    5 AGGLGSLYVSTTCGGFFGGTKSPQGLSPSTQEI-LSWPSPQDANGVCQKLAKRVEARVEAMVPFTCITPAPACERRRLRLVRYFFFSVLARGDPHAST----------------TPADAGHAATATTTVSTASLGDFGGQRRRDCLRLAGEKRRDGDGSILVPTDFEGQLNAVLGALLEAAKELLPGARDGGAAVNAVGETMVLTLKGCCALDRASSTRDTSLTTIPRRTSMCQHALCTPRLGRKNLEGGSRQEDGVLLVPDSRKLRQEIVRSTCMDPMGHIRPDYVSYVAAPIFADGAPLGNFCVFSRKTLKELGWTVHHTTILRGLADAASTEMIRICQLAELDCRRYRRKQRR 343
            A G  S YVST+CGGFFG TKS    S S Q   L WPSPQDANGV QKLAKRVEAR+EAMVPF    P PA ERRR+R    F FS+ A  +   +T                 PA A  A      VS       GG+   DC R    +           T  E QL A LGALLEAAK L+PGAR+GGAAVNAVGET VLTLKG CAL+RA+S  DTSL+TIPRR SMCQHA+C PRLGRK+L+GG R EDGVLLVPD RKLRQEIVRSTCMDP G +RPDYV+YV API+ DGAPLG FCVFSR+TL++LGWT HHT +LRGLADAA+TE++R+C++AEL+ R+ + + RR
Sbjct:  697 ADGGNSTYVSTSCGGFFGTTKSLAVDSTSGQAAALPWPSPQDANGVYQKLAKRVEARIEAMVPFASPNPTPASERRRVRSANAFLFSITAGRNGTYTTFVTGNGXXXXXXXXXRRPA-AAPAVPPRRGVSNRCRTSSGGEE--DCARYRYHR-----------TSLEEQLYAGLGALLEAAKALVPGAREGGAAVNAVGETAVLTLKGGCALNRATSVGDTSLSTIPRRASMCQHAVCAPRLGRKSLDGGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVGAPIYVDGAPLGTFCVFSRRTLRDLGWTAHHTIVLRGLADAAATEIVRLCRMAELEDRQEQPRHRR 1038          
BLAST of mRNA_H-paniculata_contig565.13179.1 vs. uniprot
Match: D7FXI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI9_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 3.220e-84
Identity = 169/307 (55.05%), Postives = 200/307 (65.15%), Query Frame = 0
Query:   65 VPFTCITPAPACERRRLRLVRYFFFSVLARGDPHASTTPADAG------------------HAATATTTVSTASLGD---FGGQRRRDCLRLAGEKRRDGDGSILVPTDFEGQLNAVLGALLEAAKELLPGARDGGAAVNAVGETMVLTLKGCCALDRASSTRDTSLTTIPRRTSMCQHALCTPRLGRKNLEGGSRQEDGVLLVPDSRKLRQEIVRSTCMDPMGHIRPDYVSYVAAPIFADGAPLGNFCVFSRKTLKELGWTVHHTTILRGLADAASTEMIRICQLAELDCRRYRRKQRRHPRPSAP 350
            VPF    P PA ERRR+R  + F FS+ A  +   +T  A  G                    A A        + +          DC R               PT  E QL A LGALLEAAK L+PGAR+GGAAVNAVGET VLTLKG CAL+RA+S  DTSL+TIPRR SMCQHA+C PRLGRK+L+ G R EDGVLLVPD RKLRQEIVRSTCMDP G +RPDYV+YV API+ DGAPLG FCVFSR+TLK+LGWT HHT +LRGLADAA+TEM+R+C++AEL+ R+ +++ RR     AP
Sbjct:  722 VPFASPNPTPASERRRVRSAKTFLFSITAGRNGTYTTFVAGNGGXXXXXXXXXXXXXXXXRRPAAAPAVAPRRGVSNRCRSSSSAEEDCARYRYH-----------PTSLEEQLYAGLGALLEAAKRLVPGAREGGAAVNAVGETAVLTLKGGCALNRAASVGDTSLSTIPRRASMCQHAVCAPRLGRKSLDAGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVGAPIYVDGAPLGTFCVFSRRTLKDLGWTAHHTVVLRGLADAAATEMVRLCRMAELEDRQEQQRHRRRRESPAP 1017          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig565.13179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLQ0_9PHAE2.580e-10859.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXI9_ECTSI3.220e-8455.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig565contigH-paniculata_contig565:25418..35464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig565.13179.1mRNA_H-paniculata_contig565.13179.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig565 25418..35464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig565.13179.1 ID=prot_H-paniculata_contig565.13179.1|Name=mRNA_H-paniculata_contig565.13179.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=618bp
TNESAGGLGSLYVSTTCGGFFGGTKSPQGLSPSTQEILSWPSPQDANGVC
QKLAKRVEARVEAMVPFTCITPAPACERRRLRLVRYFFFSVLARGDPHAS
TTPADAGHAATATTTVSTASLGDFGGQRRRDCLRLAGEKRRDGDGSILVP
TDFEGQLNAVLGALLEAAKELLPGARDGGAAVNAVGETMVLTLKGCCALD
RASSTRDTSLTTIPRRTSMCQHALCTPRLGRKNLEGGSRQEDGVLLVPDS
RKLRQEIVRSTCMDPMGHIRPDYVSYVAAPIFADGAPLGNFCVFSRKTLK
ELGWTVHHTTILRGLADAASTEMIRICQLAELDCRRYRRKQRRHPRPSAP
PSNSESSQPPSLSEHQHPPPPVASSLSSRAASLRAGVLMSSAPVSPAVGA
APSTRLAIDRAIPRASSYRSRGSGGGNDGGSVLAEDNNTYSDSSRNNNNH
NNNNMATASSFSSTSGNVFVNEGRGGRYGDGDGNGNGRGGVRSGTESAAG
GDSDSHDNSSSSNSKSHSQSRSMDRAVDAEENLEPEGGGNAERFGVAAAQ
LFNGGGDRGCGRSNFLDQLEKAASPSGELRGGGHEQERIRNDLQLPSLLG
VASSDAAVTVGVAAAAEG
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