prot_H-paniculata_contig5642.13173.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5642.13173.1
Unique Nameprot_H-paniculata_contig5642.13173.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length160
Homology
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: D8LMZ4_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMZ4_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.080e-28
Identity = 116/158 (73.42%), Postives = 128/158 (81.01%), Query Frame = 0
Query:    4 VARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFELPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGGNSGLVQED-LSELLRRRP-TLKIFADEG 159
            +AR+LK+AARL SAT SL+LR SEDLVC NLMC K+G AC+CRLAV +SRL  L+ELD+A NDLGVLPE VFELP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     HV GNSGL   D + E L+ RP T  +F D G
Sbjct:    3 IARSLKDAARLGSATTSLLLRRSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLKELDVAENDLGVLPEPVFELPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTEVHVDGNSGLGSSDRVVEALQHRPQTTVVFGDAG 160          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: T0QH27_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QH27_SAPDV)

HSP 1 Score: 83.6 bits (205), Expect = 2.010e-17
Identity = 39/74 (52.70%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    4 VARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFEL 77
            +A++L++AA  TSA R L+LR SEDL+CMNLMC +VG AC+C+L+V + RL  L  LD++ N+L  LP ++F L
Sbjct:    2 IAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLKSLPPAIFSL 75          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: A0A1V9ZV51_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZV51_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.010e-16
Identity = 37/74 (50.00%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    4 VARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFEL 77
            +A++L++AA  TS+ + L+LR S+DLVC NLMC +VG AC+C+L++ + RL  L ELD++ N L +LP S+F+L
Sbjct:    2 IAKSLRDAATHTSSVQKLVLRKSQDLVCRNLMCERVGEACVCKLSLVLERLPQLEELDVSENKLQMLPPSIFQL 75          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: A0A1V9Z9Y8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9Y8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.630e-16
Identity = 39/74 (52.70%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    4 VARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFEL 77
            +A++L+EAA  T+A R L+LR SEDLVC NLMC +VG AC+C+L++ + RL  L  LD++ N LG LP +V  L
Sbjct:    2 IAKSLREAATHTTAVRKLLLRKSEDLVCRNLMCERVGEACVCKLSLVLERLPELTHLDVSGNKLGALPPAVAAL 75          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: A0A836CFY3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.420e-16
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   20 SLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFE 76
            SL+LRSSEDL+C N+MC K+GGACLCRLAV + R  GL+ LD+A N L  LPE+V E
Sbjct:   28 SLVLRSSEDLLCRNIMCEKLGGACLCRLAVCLGRCSGLQSLDLAKNGLATLPEAVLE 84          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: W7U0H9_9STRA (Peptidyl-prolyl cis-trans fkbp-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0H9_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 9.790e-16
Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    4 VARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFEL 77
            VA++L EA R     R LIL SSEDL C+NLMC KVG  C+CRLA T+S+   L  L ++NN+L VLPE VF+L
Sbjct:   15 VAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKL 88          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: A0A067CF62_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CF62_SAPPC)

HSP 1 Score: 83.2 bits (204), Expect = 1.300e-15
Identity = 39/74 (52.70%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    4 VARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFEL 77
            +A++L++AA  TSA R L+LR SEDL+CMNLMC +VG AC+C+L+V + RL  L  LD++ N+L  LP ++F L
Sbjct:  383 IAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLMSLPPAIFSL 456          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: A0A024GQG6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQG6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.450e-15
Identity = 37/74 (50.00%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    4 VARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFEL 77
            VA + ++AA+  +ATR LIL  S+DLVC NLMC ++GGAC CRLA  ++ +  L  LD++NN+L  +P++VF L
Sbjct:    5 VATSFRQAAKSGAATRELILNKSQDLVCKNLMCERIGGACACRLAHILTCVPKLTHLDLSNNELETIPDAVFSL 78          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: A0A6G0X207_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X207_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.460e-14
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    4 VARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFEL 77
            + R+++EAA    A R LILR SEDL+C NLMC +VG AC+CRL++ + +L  L  LD++ N L  LP SVF+L
Sbjct:  292 IVRSVREAAMHMGAVRELILRQSEDLLCRNLMCERVGDACMCRLSIVLEKLPNLTTLDVSANRLPALPPSVFQL 365          
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Match: K3WPL3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPL3_GLOUD)

HSP 1 Score: 74.7 bits (182), Expect = 8.290e-14
Identity = 37/73 (50.68%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    5 ARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVTVSRLQGLRELDIANNDLGVLPESVFEL 77
            AR+L+E AR   A  SL+L SS+DL+C N+MC  VG +C C+L++ + RL  L+E+D++NN L  LPES F+L
Sbjct:   20 ARSLREVAR-GHAVHSLLLPSSQDLICKNMMCEHVGSSCACKLSLVLERLPQLQEMDLSNNKLRFLPESTFQL 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5642.13173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LMZ4_ECTSI1.080e-2873.42Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
T0QH27_SAPDV2.010e-1752.70Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1V9ZV51_9STRA1.010e-1650.00Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9Z9Y8_9STRA2.630e-1652.70Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A836CFY3_9STRA4.420e-1664.91Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
W7U0H9_9STRA9.790e-1656.76Peptidyl-prolyl cis-trans fkbp-type n=1 Tax=Nannoc... [more]
A0A067CF62_SAPPC1.300e-1552.70Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A024GQG6_9STRA1.450e-1550.00Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A6G0X207_9STRA3.460e-1451.35Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
K3WPL3_GLOUD8.290e-1450.68Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 123..145
e-value: 480.0
score: 0.9
coord: 100..119
e-value: 210.0
score: 3.7
coord: 77..96
e-value: 52.0
score: 8.2
coord: 54..73
e-value: 8.7
score: 14.2
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 42..135
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 26..153
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 100..123
e-value: 0.03
score: 23.5
coord: 54..77
e-value: 0.27
score: 20.3
coord: 78..99
e-value: 67.0
score: 6.5
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 57..73
e-value: 1.2
score: 9.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 79..134
e-value: 7.6E-8
score: 32.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 6..147
e-value: 2.2E-25
score: 91.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5642contigH-paniculata_contig5642:7459..9581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5642.13173.1mRNA_H-paniculata_contig5642.13173.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5642 6660..10218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5642.13173.1 ID=prot_H-paniculata_contig5642.13173.1|Name=mRNA_H-paniculata_contig5642.13173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp
MSGVARTLKEAARLTSATRSLILRSSEDLVCMNLMCPKVGGACLCRLAVT
VSRLQGLRELDIANNDLGVLPESVFELPVLEQLDISGNRLKALPPGIGAL
SSLRTLRMSNNLVETLPSELGQLGLLEELHVGGNSGLVQEDLSELLRRRP
TLKIFADEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf