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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1582 |
| Cds size | 909 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5637.13166.1 >prot_H-paniculata_contig5637.13166.1 ID=prot_H-paniculata_contig5637.13166.1|Name=mRNA_H-paniculata_contig5637.13166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=303bp
MWALRSKSFTPSEEFERLRVKIESRRLRRKRRNHKIKVKAEEYATSAALH
PGDEITRRINLASWHHGIYMGGGKVCDRNTDTSPNMITLEHFLEGNDEFE
VLLYKRDSDEARADTLAIAMMATQEQYWTEAPYDVLGNNCEHFTNFCRVG
HKYSRQAAAFAGGFAAAVAIGAGTGVIGTGVLLYGAYQGANHVCRQMVSK
VDDDDGEDSECESSDSEKDESTSTDRKNEVTNETWSENRTRLSINGETLA
TKPQEQEEVQLQDGAAATIACSTSCHKHSTDEDTRDTVQDNVDSVVERTT
LS* back to topmRNA from alignment at H-paniculata_contig5637:1998..7581- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5637.13166.1 ID=mRNA_H-paniculata_contig5637.13166.1|Name=mRNA_H-paniculata_contig5637.13166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5584bp|location=Sequence derived from alignment at H-paniculata_contig5637:1998..7581- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGCAAGAAGACTAGCTGTAGAGAATCATGTGGGCTCTCAGAAGCAAAAG
GTAAGGCATGTAGTGTGTCTAATCATGGATATGTGACTGTCTGTACTATA
CCCGATGATTTGGAACCCACGTGTAAGCGTGAAAGAAGTGTCTCTTCTAT
ATAGTCGAAGTAGGTGGGTACAAAACGTTGATTGTTTCACACCTTGTAAG
GTATGGGCGGCGCTCGTCTAGTCCCTATGTAAACCTAAGTGAATTATAGG
CAAACGCAACGTCTATGGCACCATTTCGCGGAAGCGACCCGACGCTGTTG
AAACCGCCTGTCCAGCGCAGACAGGCGTTTTGATTCGCGGTATAACCCCT
GCAGCTCTCGACAGCAGCAACAAGTTCTTTTTTGGTCAGAGACAACCTAC
CGAGTCAAAAGGATCTCTACAATTTTCCAGAACCGTTTTGTTTTTTCGCG
TTCAGCGTTACTTTTTAGTGATTGACCCAGACTGTCGAGGACGAGAGTAA
TATGCGCTGCCCTTACATTAATTGCGTCGTGAGGAGTCCTATGCAAAATT
TTGTTTGTAACGTGCTGCGAATAACGCCTGATGGCCTGACGTCATAAATT
TGAGAAATGACAAAATAACTGCATGACGTGGCATTTAGAAGCCACCAACT
GCTACTGCGCTTGGATTCCGCATGGGGATCGTTGTAGGTGAATATTCAAC
TTTACTTCTAGTGCGGAGTGTCAATCTCACCGTCAGAGAGGTTCGACTTG
GGGTGGATGTGGTCGATCATCGATGGGTATCGCCGGCTCGACGGTTACTG
GGAGGCGTGCACCAGATGCTGGAAATGCTCTAGTGCCGATTGCTATGTAA
AAATAACTCCGTGAAATTTTCTGCCTTCAATGCGGTAAGGTGCTTCTTTG
CGCAAAATGTTACGTGGTTATACATGTTGCACGGTAACACAGCGGTGCTG
CGACCATTCACTACCCTGCCTGAACCTGAGAACGAGCCTCGTCGCTACAT
GAGCTTAGTACAACCTATCCTGTTACGGCAGCACCAAGGTAGCTTAGCAA
GCCGAGCAAGACGGAAGTGATGCATCAGCCGACTTAGTTTTGAGTGACGA
CTGCTACTCTCTAATCTTGAGTAGACATGCAGAGTGGCGTAGTACCTTCT
CCATAGTAGAGGTAGAATAACATAGGTCAAGAATAAAATTAAAGATCTCA
ATGCGGCCGTTACATCGGCAAATGCAAGAGGCGTTTGCTGGAACATGACG
AATAACCCAAGCCGGTGAGTAGAGGCCAAGGCGCGGAGCAGACTCACCTC
TCTCCGGGAACCTATACTAAATACCCGATCCGAGGCCCACAACACCTCAG
CCCTCCTTAGAGATCAGGCACCAGCACAATCAGAAACAACTGCGGAATGT
AATAACAAGGTAGACATCACGCGGGCGACACCCAGGTTATTTCTGGTATC
CATGTTCACAGGACAGATTTGGTCGAGCTGTGACCCTGTAACACCGATTT
CTCTAGCTGGGGTATAGACTGGCGAATATTATAGGTGATATAGGTGGAAA
GCTCGTGATAGCAGAACGGCTTGCAACATGAAAGCGACCTTGACATTATG
TCATCTCAGGAGTCTCTCGATAGATTGTGAATTTGCTTTTCAGTTGCAAC
CGCACCACCCCATGTTGTGCTCCTGTCATGAACCCACAAGGCGTTTCCAA
GAATACATGGGCCGATCCAGGTCTCGCGTCTACCTAGTGTCTCGATAGGC
CAATGAGTTACAGCGGCACGACTGCATATCACCATCCAATAAACACCACG
GGTTGTGCTTACATACTCTTACAGGTACCATCGAATTTTAACCCCTAGCA
TAGCCTAAAACGAAAATTCCGACACCTCCCACCTTAGACTATATGCCCAG
TTGGACACATTCCAGCTGCAGGTAGGTTGATAGATTGATGAGCCCATTCA
AGTGCAGGTGGCGTTTGGCCTTCAACGGTCCCTTCCTTGTTATCTCCCGA
AAGAAAATTGTTCAAAGTGGTCTCCAGCGCAAATCTGGCACTCTGAAATG
GATATCTCTGAGCGTTGTCCTCCCCTCTCTCATTTGCGGGTGGGATGTCT
GCTATGTTTACGATCGGCATCATCAAGCTTTACGCCTTCTGAAGAATTTG
AGCGTCTGCGAGTGAAGATTGAGTCGAGGCGCCTCCGCAGAAAACGCAGA
AACCACAAGATCAAAGTGAAGGCGGAAGAATACGCGACCTCGGCGGCACT
TCACCCAGGAGATGAGATAACTAGACGGATAAACCTCGCCTCGTGGCATC
ATGGCATTTATATGGGAGGTGGTAAGGTGGGCGTGCCCCCGTTAGTAGAG
AGGTGCGCGCTTCGTGCAAATGGTTGGTGCCGTGTATGTTGTACTACGCC
ATTGTGTCATCCTTTCGTTGACTTGTAAAGAGTACTCCAAATGGGGTGGG
TGGCGCTTTAAGGCACAAAACAAAATCGTTCTCTCAAACTCAAAAATGTG
TCCACCTTGTCCTTTTGCAGGCACATACCTCCATCATTCTTCGTGCGGAC
GGTCACCACGAGTAGAGTGCTCCATTTTACTTGTTGAGATTTAAAATAGG
GAGGAGGATTGTCAGGGCGAACACAGGAATTCGGTGCATTTTTTTCAAAG
GTCGGAAATTGATCAATAGCTTAGTTTGTCTTGTTTACAGTGTCGAAGGG
CATCAGCCATTTTCCATTTTACTGCCTTCTAGTGATTCCTCGACAAATAA
ACTACCCTCCGGACAAATACGAATACTTGCAAACGGTTTTAACAAAAAAC
TGAAAGTGCTCGCCTAAGTTTGCTCATGTACTCTATGTGCCCCGGAACAT
CCACGACTGCTGATGATACTCGTAAATCGAATGGACAGGGGTGGGTACTT
TATTTCATCCATTCCAAAACTGAAGCGAATACTTTCAATTTTGTGAAACC
ATTTGAAGTGTTCGTATTTGTCCGGGGGTGAAATAAGCCGAGTGGCTCTC
AGGGCATCCCGTGCGAGGTTCAATACACCACATTGTCGCGCATCATGTGG
TGACGTTGAGAATGATTATCAACCTGTGTTGCTCGATCGACACACCAATA
CCTCCCCTAGCCAAAGAAAGCTAATGCGTCTTGGGTATGTGCACTCGGAT
CGCTTTTCCCGTGTATGTTAAATGCCTCGCCAGCAGGTATGCGACCGCAA
TACGGACACCTCTCCCAATATGATCACCCTGGAGCACTTTCTGGAGGGCA
ACGATGAGTTTGAAGTTTTGCTATATAAGCGCGACAGTGACGAAGCCAGG
GCTGATACGCTTGCGATCGCAATGATGGCGACACAGGAACAGTACTGGAC
AGAGGCTCCGTATGACGTTCTAGGCAACAATTGTGAGCATTTCACCAACT
TCTGCCGCGTAGGGCATAAGTACAGCAGGCAGGCAAGTGCTTGGTTCCGT
GTGGCGTCAACATCCTATGTGTTAAAAGTTAAATGATTACAAGATATGGT
AATATATGTTCGCTTCTATCCACCATGTTCAAGCTATCCATGGACCAACA
CTCACGCTAGCTAGAATGAGAGCCGCTTCCAGCCGGGTGGAGGTTTCATT
GGCTCCGACCTCTCGTTCGGGTGTTGATCGTCATCCAACGTCAAGCCGCG
ACACAATCTCTATCAATCAGGCTGCAGCTTTCGCCGGTGGATTTGCCGCC
GCGGTTGCAATTGGTGCCGGTACTGGAGTGATCGGGACTGGGGTTTTACT
CTATGGCGCGTATCAGGGGGCCAATCATGTTTGCAGGCAAATGGTCAGCA
AGGTAGATGACGACGACGGTGAAGACAGCGAATGCGAATCATCAGACAGC
GAGAAAGACGAGAGCACAAGTACTGATCGTAAAAACGAAGTGACTAACGA
AACATGTGAGTGCCGGTTAGGAGAGACCAATGTTAACGCTGTTATTAGCT
CATCATTCGCTAAATGCATAAAATCTTGAATCACAAGCAGCTAGCTGACA
GTACCCTGGATATGCTAGAACCGAAGCATTCAAATATGCGGCTTAGGATA
AATCGCATATGCTAGAAGAAGACACTTAAGTGTGCACCACGTTTGTGCAA
TATCGACAACATTTGGGGCGATTTCATGCGAAATATGCGAAATATGCGAA
ATATGCACACCCTGATCTTCATGTAAGGCGAAATATGTGGGAAACCCACA
TACGCGTTGTATGTAAAGAGGTTGACGAGGAGGGACCTCCGTTTAGCCAC
GGGAGCTTTTTAGCTTTCACAGGACACAGCCGATGATGACGTAAGCTAAG
TACGCGATGCAAAATCCGTTGAACGAATAGTCATCCCATGTTTGCCGATC
AGTACACAGCAGCGCGAAAGACCGATGCAACACCAATGCCGGAGTCAGGT
AGACGGGAACTTGCTTTCAATCGTCATTTGGGTGATGTTTAGCGAGAGAC
GAATTTGTCGAGAGACGATTGTAGCTGTCCTGTATTCACATCGAGCGCTC
GCGAAAGCTCAACCTCAGCAGGCACATTCTTTCGATCGGCAGCAGGGCGT
ACTCCCAAGACAGGGATATAATGGTCCTATATGTAATATATGTCGTTACC
TTCCAGGAGAGAGCGATAAACCATGTACGAGAGTAAAGGATGGAACGAGA
CAATAACAGAAACATTCGAGCAAGCACGATGTGTCACATGTACACGTGCA
ACAATAATGTGCCTGAGTGGCGTTGGTTACAGGGAGCGAAAATCGCACAA
GACTTTCTATCAATGGCGAAACGCTGGCAACTAAACCCCAGGAACAAGAG
GAGGTGCAACTCCAAGATGGCGCAGCAGCTACCATAGCCTGCAGCACGAG
TTGCCACAAACACTCAACAGATGAAGACACCCGCGATACTGTTCAAGATA
ATGTTGACTCTGTGGTAGAGCGGACCACGTTAAGCTAAGGATCATTTTCA
GCAGGCTAATTTTTTGCCGAAGAACAGAAATACGTCGATTCTTCTATTTT
CGGACGCTTACAATAAGAGCCAAAATTTGCTTTTAAAAAATCCACTTTTC
ATACTCGTAGAAAGACTTGAAAGGAATGGTTGACAGTTATGTCAGGTATA
TTTCGGCTCTTATTTGAAAGGTCGAATATCTTAAAATTGGCGAATTTCCG
TTTTTTCGCTAAAACACGGGCCTGCTGGGAATGACCCTACATCTCCAGGC
GTGTTAGTGCAAGAGTCAATACCCAAGTGCCACGTAACGTTTGCTCTCAA
GTATGATGTCCAACCTACACGGGTTTAAGGTATGGCCATGTATTCATGCA
AATGTGTGTGCCATGTGAAGGGGATTGGAGAGCCGAGAAGGCGTTATATG
CGACCGTTCACGGATGATGTGGAGTTGAGAATTTAGTTACCCACACTTGA
GCTTGGTCGATGAGATTGTAAGCAGGCATTTAGCGTTGTGACAAAGCAGG
TGAAGCAGGTGAAGCCCGTTGAGTTTTGCAACCCTGAACAAGGGACACAT
TTCTCACTCTCAGTGTTCACGAACAGGCGCCATGAGCTTGCGTCTCATTC
ATGTTCGTCGCTAAGCAGGCGAGTAACAGTGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5637:1998..7581- >mRNA_H-paniculata_contig5637.13166.1 ID=mRNA_H-paniculata_contig5637.13166.1|Name=mRNA_H-paniculata_contig5637.13166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1818bp|location=Sequence derived from alignment at H-paniculata_contig5637:1998..7581- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGGGCTCTCAGAAGCAAAAGATGTGGGCTCTCAGAAGCAAAAGCTTT
ACGCCTTCTGAAGAATTTGAGCGTCTGCGAGTGAAGATTGAGTCGAGGCG
CCTCCGCAGAAAACGCAGAAACCACAAGATCAAAGTGAAGGCGGAAGAAT
ACGCGACCTCGGCGGCACTTCACCCAGGAGATGAGATAACTAGACGGATA
AACCTCGCCTCGTGGCATCATGGCATTTATATGGGAGGTGGTAAGCTTTA
CGCCTTCTGAAGAATTTGAGCGTCTGCGAGTGAAGATTGAGTCGAGGCGC
CTCCGCAGAAAACGCAGAAACCACAAGATCAAAGTGAAGGCGGAAGAATA
CGCGACCTCGGCGGCACTTCACCCAGGAGATGAGATAACTAGACGGATAA
ACCTCGCCTCGTGGCATCATGGCATTTATATGGGAGGTGGTAAGGTATGC
GACCGCAATACGGACACCTCTCCCAATATGATCACCCTGGAGCACTTTCT
GGAGGGCAACGATGAGTTTGAAGTTTTGCTATATAAGCGCGACAGTGACG
AAGCCAGGGCTGATACGCTTGCGATCGCAATGATGGCGACACAGGAACAG
TACTGGACAGAGGCTCCGTATGACGTTCTAGGCAACAATTGTGAGCATTT
CACCAACTTCTGCCGCGTAGGGCATAAGTACAGCAGGCAGGTATGCGACC
GCAATACGGACACCTCTCCCAATATGATCACCCTGGAGCACTTTCTGGAG
GGCAACGATGAGTTTGAAGTTTTGCTATATAAGCGCGACAGTGACGAAGC
CAGGGCTGATACGCTTGCGATCGCAATGATGGCGACACAGGAACAGTACT
GGACAGAGGCTCCGTATGACGTTCTAGGCAACAATTGTGAGCATTTCACC
AACTTCTGCCGCGTAGGGCATAAGTACAGCAGGCAGGCTGCAGCTTTCGC
CGGTGGATTTGCCGCCGCGGTTGCAATTGGTGCCGGTACTGGAGTGATCG
GGACTGGGGTTTTACTCTATGGCGCGTATCAGGGGGCCAATCATGTTTGC
AGGCAAATGGTCAGCAAGGTAGATGACGACGACGGTGAAGACAGCGAATG
CGAATCATCAGACAGCGAGAAAGACGAGAGCACAAGTACTGATCGTAAAA
ACGAAGTGACTAACGAAACATGCTGCAGCTTTCGCCGGTGGATTTGCCGC
CGCGGTTGCAATTGGTGCCGGTACTGGAGTGATCGGGACTGGGGTTTTAC
TCTATGGCGCGTATCAGGGGGCCAATCATGTTTGCAGGCAAATGGTCAGC
AAGGTAGATGACGACGACGGTGAAGACAGCGAATGCGAATCATCAGACAG
CGAGAAAGACGAGAGCACAAGTACTGATCGTAAAAACGAAGTGACTAACG
AAACATGGAGCGAAAATCGCACAAGACTTTCTATCAATGGCGAAACGCTG
GCAACTAAACCCCAGGAACAAGAGGAGGTGCAACTCCAAGATGGCGCAGC
AGCTACCATAGCCTGCAGCACGAGTTGCCACAAACACTCAACAGATGAAG
ACACCCGCGATACTGTTCAAGATAATGTTGACTCTGTGGTAGAGCGGACC
ACGTTAAGCTAAGGAGCGAAAATCGCACAAGACTTTCTATCAATGGCGAA
ACGCTGGCAACTAAACCCCAGGAACAAGAGGAGGTGCAACTCCAAGATGG
CGCAGCAGCTACCATAGCCTGCAGCACGAGTTGCCACAAACACTCAACAG
ATGAAGACACCCGCGATACTGTTCAAGATAATGTTGACTCTGTGGTAGAG
CGGACCACGTTAAGCTAA back to top
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